RNA–Protein interactions for RNA: ENST00000505625.5

MATR3-211, Transcript of matrin 3, humanhuman

TSL 1 (best)

Gene MATR3, Length 7,306 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-211ENST00000505625 DAZ1Q9NQZ3 744 aaKnown RBP4.22□□□□□ -1.73
MATR3-211ENST00000505625 SCO2A0A1W2PP80 73 aa4.22□□□□□ -1.73
MATR3-211ENST00000505625 PMS2P5A8MQ11 134 aa4.22□□□□□ -1.73
MATR3-211ENST00000505625 CD5P06127 495 aa4.22□□□□□ -1.73
MATR3-211ENST00000505625 FUNDC1Q8IVP5 155 aa4.22□□□□□ -1.73
MATR3-211ENST00000505625 ARID2Q68CP9 1835 aa4.22□□□□□ -1.73
MATR3-211ENST00000505625 LRRK1Q38SD2 2015 aa4.22□□□□□ -1.73
MATR3-211ENST00000505625 IGHV4-38-2P0DP08 117 aa4.22□□□□□ -1.73
MATR3-211ENST00000505625 CAMK2N2Q96S95 79 aa4.22□□□□□ -1.73
MATR3-211ENST00000505625 B9D2Q9BPU9 175 aa4.22□□□□□ -1.73
MATR3-211ENST00000505625 RLFQ13129 1914 aa4.22□□□□□ -1.73
MATR3-211ENST00000505625 KNL1Q8NG31 2342 aa4.22□□□□□ -1.73
MATR3-211ENST00000505625 CACNA1DQ01668 2161 aa4.22□□□□□ -1.73
MATR3-211ENST00000505625 IGF1P05019 195 aa4.22□□□□□ -1.73
MATR3-211ENST00000505625 IGKV4-1P06312 121 aa4.22□□□□□ -1.73
MATR3-211ENST00000505625 FOXG1P55316 489 aaPredicted RBP4.22□□□□□ -1.73
MATR3-211ENST00000505625 RNF133Q8WVZ7 376 aa4.22□□□□□ -1.73
MATR3-211ENST00000505625 SMR3AQ99954 134 aa4.22□□□□□ -1.73
MATR3-211ENST00000505625 SDK2Q58EX2 2172 aa4.22□□□□□ -1.73
MATR3-211ENST00000505625 FAM90A18PA6NE21 464 aa4.21□□□□□ -1.73
MATR3-211ENST00000505625 FAM90A16PA6NEW6 464 aa4.21□□□□□ -1.73
MATR3-211ENST00000505625 FAM90A9PA6NNJ1 464 aa4.21□□□□□ -1.73
MATR3-211ENST00000505625 KLK8O60259 260 aa4.21□□□□□ -1.73
MATR3-211ENST00000505625 FAM90A15PP0C7V4 464 aa4.21□□□□□ -1.73
MATR3-211ENST00000505625 FAM90A14PP0C7W9 464 aa4.21□□□□□ -1.73
MATR3-211ENST00000505625 TCEAL1Q15170 157 aa4.21□□□□□ -1.73
MATR3-211ENST00000505625 UBE2V2Q15819 145 aa4.21□□□□□ -1.73
MATR3-211ENST00000505625 ZNF362Q5T0B9 420 aaPredicted RBP4.21□□□□□ -1.73
MATR3-211ENST00000505625 SSBP4Q9BWG4 385 aaPredicted RBP4.21□□□□□ -1.73
MATR3-211ENST00000505625 VPREB3Q9UKI3 123 aa4.21□□□□□ -1.73
MATR3-211ENST00000505625 FAM90A20PA6NIJ5 464 aa4.21□□□□□ -1.74
MATR3-211ENST00000505625 CTDSPLO15194 276 aa4.21□□□□□ -1.74
MATR3-211ENST00000505625 LGALS1P09382 135 aaKnown RBP4.21□□□□□ -1.74
MATR3-211ENST00000505625 PYYP10082 97 aa4.21□□□□□ -1.74
MATR3-211ENST00000505625 NBL1P41271 181 aa4.21□□□□□ -1.74
MATR3-211ENST00000505625 SURF2Q15527 256 aaPredicted RBP4.21□□□□□ -1.74
MATR3-211ENST00000505625 SIGMAR1Q99720 223 aa4.21□□□□□ -1.74
MATR3-211ENST00000505625 DOCK11Q5JSL3 2073 aa4.21□□□□□ -1.74
MATR3-211ENST00000505625 NCR3O14931 201 aa4.21□□□□□ -1.74
MATR3-211ENST00000505625 IL18BPO95998 194 aa4.21□□□□□ -1.74
MATR3-211ENST00000505625 SSBP1Q04837 148 aaKnown RBP4.21□□□□□ -1.74
MATR3-211ENST00000505625 SPOCK3Q9BQ16 436 aa4.21□□□□□ -1.74
MATR3-211ENST00000505625 SRCAPQ6ZRS2 3230 aa4.21□□□□□ -1.74
MATR3-211ENST00000505625 NYNRINQ9P2P1 1898 aaKnown RBP4.21□□□□□ -1.74
MATR3-211ENST00000505625 IGKV1-8A0A0C4DH67 115 aa4.21□□□□□ -1.74
MATR3-211ENST00000505625 FAM90A7PA6NKC0 464 aa4.21□□□□□ -1.74
MATR3-211ENST00000505625 FAM90A22PA8MWA6 464 aa4.21□□□□□ -1.74
MATR3-211ENST00000505625 FAM90A12PA8MX19 464 aa4.21□□□□□ -1.74
MATR3-211ENST00000505625 FAM90A23PA8MXZ1 464 aa4.21□□□□□ -1.74
MATR3-211ENST00000505625 PLNP26678 52 aa4.21□□□□□ -1.74
MATR3-211ENST00000505625 ADMP35318 185 aa4.21□□□□□ -1.74
MATR3-211ENST00000505625 GAGE2AQ6NT46 116 aa4.21□□□□□ -1.74
MATR3-211ENST00000505625 RFNGQ9Y644 331 aa4.21□□□□□ -1.74
MATR3-211ENST00000505625 ZNF106Q9H2Y7 1883 aaKnown RBP4.21□□□□□ -1.74
MATR3-211ENST00000505625 TRAV8-3A0A0A6YYJ7 113 aa4.21□□□□□ -1.74
MATR3-211ENST00000505625 C12orf77C9JDV5 145 aa4.21□□□□□ -1.74
MATR3-211ENST00000505625 VSIG8P0DPA2 414 aa4.21□□□□□ -1.74
MATR3-211ENST00000505625 CRYGSP22914 178 aa4.21□□□□□ -1.74
MATR3-211ENST00000505625 C10orf55Q5SWW7 151 aa4.21□□□□□ -1.74
MATR3-211ENST00000505625 ARTNQ5T4W7 220 aa4.21□□□□□ -1.74
MATR3-211ENST00000505625 CYB561D1Q8N8Q1 229 aa4.21□□□□□ -1.74
MATR3-211ENST00000505625 MESP1Q9BRJ9 268 aa4.21□□□□□ -1.74
MATR3-211ENST00000505625 IGKV1D-13A0A0B4J2D9 117 aa4.21□□□□□ -1.74
MATR3-211ENST00000505625 IGKV1-13P0DP09 117 aa4.21□□□□□ -1.74
MATR3-211ENST00000505625 ATP6V0CP27449 155 aa4.21□□□□□ -1.74
MATR3-211ENST00000505625 UBE2D2P62837 147 aa4.21□□□□□ -1.74
MATR3-211ENST00000505625 NEGR1Q7Z3B1 354 aa4.21□□□□□ -1.74
MATR3-211ENST00000505625 GCHFRP30047 84 aa4.2□□□□□ -1.74
MATR3-211ENST00000505625 MORN2Q502X0 79 aa4.2□□□□□ -1.74
MATR3-211ENST00000505625 BCL6BQ8N143 479 aaPredicted RBP4.2□□□□□ -1.74
MATR3-211ENST00000505625 EVX1P49640 407 aa4.2□□□□□ -1.74
MATR3-211ENST00000505625 ODF3L1Q8IXM7 274 aa4.2□□□□□ -1.74
MATR3-211ENST00000505625 RPP25LQ8N5L8 163 aaKnown RBP4.2□□□□□ -1.74
MATR3-211ENST00000505625 GTSF1LQ9H1H1 148 aa4.2□□□□□ -1.74
MATR3-211ENST00000505625 CRYGCP07315 174 aa4.2□□□□□ -1.74
MATR3-211ENST00000505625 C5orf24Q7Z6I8 188 aa4.2□□□□□ -1.74
MATR3-211ENST00000505625 DEFB125Q8N687 156 aa4.2□□□□□ -1.74
MATR3-211ENST00000505625 TMEM170AQ8WVE7 144 aa4.2□□□□□ -1.74
MATR3-211ENST00000505625 PMCHL2Q9BQD1 86 aa4.2□□□□□ -1.74
MATR3-211ENST00000505625 EXPH5Q8NEV8 1989 aa4.2□□□□□ -1.74
MATR3-211ENST00000505625 IGKV1-17P01599 117 aa4.2□□□□□ -1.74
MATR3-211ENST00000505625 RETNLBQ9BQ08 111 aa4.2□□□□□ -1.74
MATR3-211ENST00000505625 RNASE2P10153 161 aaKnown RBP4.2□□□□□ -1.74
MATR3-211ENST00000505625 FAM74A3Q4VXF1 159 aa4.2□□□□□ -1.74
MATR3-211ENST00000505625 OTORQ9NRC9 128 aa4.2□□□□□ -1.74
MATR3-211ENST00000505625 EP400Q96L91 3159 aa4.2□□□□□ -1.74
MATR3-211ENST00000505625 PCNX2A6NKB5 2137 aa4.2□□□□□ -1.74
MATR3-211ENST00000505625 H3BQ15 152 aa4.19□□□□□ -1.74
MATR3-211ENST00000505625 FAM90A2PQ658T7 463 aa4.19□□□□□ -1.74
MATR3-211ENST00000505625 DMKNQ6E0U4 476 aaPredicted RBP4.19□□□□□ -1.74
MATR3-211ENST00000505625 COX11Q9Y6N1 276 aa4.19□□□□□ -1.74
MATR3-211ENST00000505625 DNAJC9-AS1A6NH13 148 aa4.19□□□□□ -1.74
MATR3-211ENST00000505625 CRYGDP07320 174 aa4.19□□□□□ -1.74
MATR3-211ENST00000505625 RND3P61587 244 aa4.19□□□□□ -1.74
MATR3-211ENST00000505625 RPL23P62829 140 aaKnown RBP4.19□□□□□ -1.74
MATR3-211ENST00000505625 IRF3Q14653 427 aa4.19□□□□□ -1.74
MATR3-211ENST00000505625 SPINK6Q6UWN8 80 aa4.19□□□□□ -1.74
MATR3-211ENST00000505625 SLIRPQ9GZT3 109 aaKnown RBP4.19□□□□□ -1.74
MATR3-211ENST00000505625 MRPL36Q9P0J6 103 aaKnown RBP4.19□□□□□ -1.74
MATR3-211ENST00000505625 FOLR2P14207 255 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms