RNA–Protein interactions for RNA: ENST00000503923.1

VCAN-205, Transcript of versican, humanhuman

TSL 4

Gene VCAN, Length 498 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-205ENST00000503923 A0A1W2PPV4 95 aa8.22□□□□□ -1.09
VCAN-205ENST00000503923 KNCNA6PVL3 124 aa8.22□□□□□ -1.09
VCAN-205ENST00000503923 BCL2L11O43521 198 aa8.22□□□□□ -1.09
VCAN-205ENST00000503923 PFDN1O60925 122 aa8.22□□□□□ -1.09
VCAN-205ENST00000503923 HIST1H1EP10412 219 aaKnown RBP8.22□□□□□ -1.09
VCAN-205ENST00000503923 RPL35AP18077 110 aaKnown RBP8.22□□□□□ -1.09
VCAN-205ENST00000503923 RAB2AP61019 212 aa8.22□□□□□ -1.09
VCAN-205ENST00000503923 ACTL10Q5JWF8 245 aa8.22□□□□□ -1.09
VCAN-205ENST00000503923 TMUB2Q71RG4 321 aa8.22□□□□□ -1.09
VCAN-205ENST00000503923 KIR2DL5AQ8N109 375 aa8.22□□□□□ -1.09
VCAN-205ENST00000503923 OR10G4Q8NGN3 311 aa8.22□□□□□ -1.09
VCAN-205ENST00000503923 OR10G9Q8NGN4 311 aa8.22□□□□□ -1.09
VCAN-205ENST00000503923 OR10G7Q8NGN6 311 aa8.22□□□□□ -1.09
VCAN-205ENST00000503923 KIR2DL5BQ8NHK3 375 aa8.22□□□□□ -1.09
VCAN-205ENST00000503923 FAM167A-AS1Q96KT0 104 aa8.22□□□□□ -1.09
VCAN-205ENST00000503923 C20orf173Q96LM9 149 aa8.22□□□□□ -1.09
VCAN-205ENST00000503923 OR51M1Q9H341 326 aa8.22□□□□□ -1.09
VCAN-205ENST00000503923 RPRMQ9NS64 109 aa8.22□□□□□ -1.09
VCAN-205ENST00000503923 H3BQ15 152 aa8.21□□□□□ -1.1
VCAN-205ENST00000503923 ZNF253O75346 499 aa8.21□□□□□ -1.1
VCAN-205ENST00000503923 SNRPCP09234 159 aaKnown RBP8.21□□□□□ -1.1
VCAN-205ENST00000503923 PYYP10082 97 aa8.21□□□□□ -1.1
VCAN-205ENST00000503923 EIF5AP63241 154 aaKnown RBP8.21□□□□□ -1.1
VCAN-205ENST00000503923 KHDC3LQ587J8 217 aa8.21□□□□□ -1.1
VCAN-205ENST00000503923 IGFL4Q6B9Z1 124 aa8.21□□□□□ -1.1
VCAN-205ENST00000503923 EBLN2Q6P2I7 272 aa8.21□□□□□ -1.1
VCAN-205ENST00000503923 FAM122CQ6P4D5 195 aa8.21□□□□□ -1.1
VCAN-205ENST00000503923 FOXI2Q6ZQN5 318 aa8.21□□□□□ -1.1
VCAN-205ENST00000503923 TRPT1Q86TN4 253 aaKnown RBP8.21□□□□□ -1.1
VCAN-205ENST00000503923 SAT2Q96F10 170 aaPredicted RBP8.21□□□□□ -1.1
VCAN-205ENST00000503923 TM2D3Q9BRN9 247 aa8.21□□□□□ -1.1
VCAN-205ENST00000503923 PAXXQ9BUH6 204 aa8.21□□□□□ -1.1
VCAN-205ENST00000503923 ZNF471Q9BX82 626 aaPredicted RBP8.21□□□□□ -1.1
VCAN-205ENST00000503923 SAV1Q9H4B6 383 aaPredicted RBP8.21□□□□□ -1.1
VCAN-205ENST00000503923 ZMAT4Q9H898 229 aa8.21□□□□□ -1.1
VCAN-205ENST00000503923 ZNF331Q9NQX6 463 aaPredicted RBP8.21□□□□□ -1.1
VCAN-205ENST00000503923 ZNF586Q9NXT0 402 aa8.21□□□□□ -1.1
VCAN-205ENST00000503923 CLEC5AQ9NY25 188 aa8.21□□□□□ -1.1
VCAN-205ENST00000503923 TRBV19A0A075B6N1 114 aa8.2□□□□□ -1.1
VCAN-205ENST00000503923 H3BMM0 161 aa8.2□□□□□ -1.1
VCAN-205ENST00000503923 H3BTX0 84 aa8.2□□□□□ -1.1
VCAN-205ENST00000503923 UBE2CO00762 179 aa8.2□□□□□ -1.1
VCAN-205ENST00000503923 OR7C2O60412 319 aa8.2□□□□□ -1.1
VCAN-205ENST00000503923 SPP1P10451 314 aa8.2□□□□□ -1.1
VCAN-205ENST00000503923 HLA-DRB4P13762 266 aa8.2□□□□□ -1.1
VCAN-205ENST00000503923 CDC34P49427 236 aaPredicted RBP8.2□□□□□ -1.1
VCAN-205ENST00000503923 CD300CQ08708 224 aa8.2□□□□□ -1.1
VCAN-205ENST00000503923 PDE6HQ13956 83 aa8.2□□□□□ -1.1
VCAN-205ENST00000503923 LGALSLQ3ZCW2 172 aaPredicted RBP8.2□□□□□ -1.1
VCAN-205ENST00000503923 ZFP69Q49AA0 526 aa8.2□□□□□ -1.1
VCAN-205ENST00000503923 TMEM41BQ5BJD5 291 aa8.2□□□□□ -1.1
VCAN-205ENST00000503923 PQLC2Q6ZP29 291 aa8.2□□□□□ -1.1
VCAN-205ENST00000503923 RNF182Q8N6D2 247 aa8.2□□□□□ -1.1
VCAN-205ENST00000503923 RNF141Q8WVD5 230 aa8.2□□□□□ -1.1
VCAN-205ENST00000503923 FXYD5Q96DB9 178 aa8.2□□□□□ -1.1
VCAN-205ENST00000503923 SPATA25Q9BR10 227 aa8.2□□□□□ -1.1
VCAN-205ENST00000503923 CSTL1Q9H114 145 aa8.2□□□□□ -1.1
VCAN-205ENST00000503923 HLA-DRB4X5D2U9 266 aa8.2□□□□□ -1.1
VCAN-205ENST00000503923 AGRNO00468 2067 aa8.2□□□□□ -1.1
VCAN-205ENST00000503923 SLC17A3O00476 420 aa8.19□□□□□ -1.1
VCAN-205ENST00000503923 OR10J4P0C629 311 aa8.19□□□□□ -1.1
VCAN-205ENST00000503923 NBEAP1P0C6P0 100 aa8.19□□□□□ -1.1
VCAN-205ENST00000503923 TPT1P13693 172 aaKnown RBP8.19□□□□□ -1.1
VCAN-205ENST00000503923 HLA-DMBP28068 263 aa8.19□□□□□ -1.1
VCAN-205ENST00000503923 PSG9Q00887 426 aa8.19□□□□□ -1.1
VCAN-205ENST00000503923 PSG3Q16557 428 aa8.19□□□□□ -1.1
VCAN-205ENST00000503923 AKR1C8PQ5T2L2 129 aa8.19□□□□□ -1.1
VCAN-205ENST00000503923 MORN3Q6PF18 240 aaPredicted RBP8.19□□□□□ -1.1
VCAN-205ENST00000503923 RPP25LQ8N5L8 163 aaKnown RBP8.19□□□□□ -1.1
VCAN-205ENST00000503923 ZNF738Q8NE65 137 aa8.19□□□□□ -1.1
VCAN-205ENST00000503923 BLNKQ8WV28 456 aa8.19□□□□□ -1.1
VCAN-205ENST00000503923 ZNF503Q96F45 646 aa8.19□□□□□ -1.1
VCAN-205ENST00000503923 ACTR3CQ9C0K3 210 aaPredicted RBP8.19□□□□□ -1.1
VCAN-205ENST00000503923 HUWE1Q7Z6Z7 4374 aaKnown RBP8.19□□□□□ -1.1
VCAN-205ENST00000503923 A0A0J9YX75 114 aa8.18□□□□□ -1.1
VCAN-205ENST00000503923 F6UB75 175 aa8.18□□□□□ -1.1
VCAN-205ENST00000503923 DUSP14O95147 198 aaKnown RBP8.18□□□□□ -1.1
VCAN-205ENST00000503923 NDUFB4O95168 129 aa8.18□□□□□ -1.1
VCAN-205ENST00000503923 SEC11BP0C7V7 166 aa8.18□□□□□ -1.1
VCAN-205ENST00000503923 STAG3L2P0CL84 134 aa8.18□□□□□ -1.1
VCAN-205ENST00000503923 STAG3L3P0CL85 134 aa8.18□□□□□ -1.1
VCAN-205ENST00000503923 C4BPBP20851 252 aa8.18□□□□□ -1.1
VCAN-205ENST00000503923 DEFB1P60022 68 aa8.18□□□□□ -1.1
VCAN-205ENST00000503923 NUTF2P61970 127 aaKnown RBP8.18□□□□□ -1.1
VCAN-205ENST00000503923 UBE2L3P68036 154 aaKnown RBP8.18□□□□□ -1.1
VCAN-205ENST00000503923 GDF5OSQ5U4N7 250 aa8.18□□□□□ -1.1
VCAN-205ENST00000503923 Q6ZWC4 215 aa8.18□□□□□ -1.1
VCAN-205ENST00000503923 BAP18Q8IXM2 172 aa8.18□□□□□ -1.1
VCAN-205ENST00000503923 STOML3Q8TAV4 291 aa8.18□□□□□ -1.1
VCAN-205ENST00000503923 RAB24Q969Q5 203 aa8.18□□□□□ -1.1
VCAN-205ENST00000503923 MRPL53Q96EL3 112 aaKnown RBP8.18□□□□□ -1.1
VCAN-205ENST00000503923 CLUHP3Q96NS8 147 aa8.18□□□□□ -1.1
VCAN-205ENST00000503923 AAMDCQ9H7C9 122 aa8.18□□□□□ -1.1
VCAN-205ENST00000503923 PRELID1Q9Y255 219 aa8.18□□□□□ -1.1
VCAN-205ENST00000503923 TGP01266 2768 aa8.18□□□□□ -1.1
VCAN-205ENST00000503923 HMGB3O15347 200 aaKnown RBP8.17□□□□□ -1.1
VCAN-205ENST00000503923 EIF3GO75821 320 aaKnown RBP eCLIP8.17□□□□□ -1.1
VCAN-205ENST00000503923 CA1P00915 261 aaPredicted RBP8.17□□□□□ -1.1
VCAN-205ENST00000503923 OR4B1Q8NGF8 309 aa8.17□□□□□ -1.1
VCAN-205ENST00000503923 RPUSD4Q96CM3 377 aaKnown RBP8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms