RNA–Protein interactions for RNA: ENST00000502394.1

MATR3-231, Transcript of matrin 3, human

TSL 4

Gene MATR3, Length 589 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-231	ENST00000502394	OR4F4	Q96R69	305 aa		9.2	□□□□□ -0.94
MATR3-231	ENST00000502394	ZNF747	Q9BV97	191 aa		9.2	□□□□□ -0.94
MATR3-231	ENST00000502394	YTHDF2	Q9Y5A9	579 aa	Known RBP	9.2	□□□□□ -0.94
MATR3-231	ENST00000502394	TRBV19	A0A075B6N1	114 aa		9.19	□□□□□ -0.94
MATR3-231	ENST00000502394		C9JQL5	133 aa		9.19	□□□□□ -0.94
MATR3-231	ENST00000502394	PAGE4	O60829	102 aa		9.19	□□□□□ -0.94
MATR3-231	ENST00000502394	IFNA1	P01562	189 aa		9.19	□□□□□ -0.94
MATR3-231	ENST00000502394	CSN3	P07498	182 aa		9.19	□□□□□ -0.94
MATR3-231	ENST00000502394	FOLR2	P14207	255 aa		9.19	□□□□□ -0.94
MATR3-231	ENST00000502394	CBLN1	P23435	193 aa		9.19	□□□□□ -0.94
MATR3-231	ENST00000502394	PDE6H	Q13956	83 aa		9.19	□□□□□ -0.94
MATR3-231	ENST00000502394	HAGH	Q16775	308 aa		9.19	□□□□□ -0.94
MATR3-231	ENST00000502394	UQCC3	Q6UW78	93 aa		9.19	□□□□□ -0.94
MATR3-231	ENST00000502394	UNQ5830/PRO19650/PRO19816	Q6UY13	95 aa		9.19	□□□□□ -0.94
MATR3-231	ENST00000502394	CCDC28A	Q8IWP9	274 aa		9.19	□□□□□ -0.94
MATR3-231	ENST00000502394	IQCF2	Q8IXL9	164 aa		9.19	□□□□□ -0.94
MATR3-231	ENST00000502394	NARS2	Q96I59	477 aa	Known RBP	9.19	□□□□□ -0.94
MATR3-231	ENST00000502394	RARRES2	Q99969	163 aa		9.19	□□□□□ -0.94
MATR3-231	ENST00000502394	TMEM231	Q9H6L2	316 aa		9.19	□□□□□ -0.94
MATR3-231	ENST00000502394	SIGLEC8	Q9NYZ4	499 aa		9.19	□□□□□ -0.94
MATR3-231	ENST00000502394	PEMT	Q9UBM1	199 aa		9.19	□□□□□ -0.94
MATR3-231	ENST00000502394	GGTLC3	B5MD39	225 aa		9.18	□□□□□ -0.94
MATR3-231	ENST00000502394	SLC17A3	O00476	420 aa		9.18	□□□□□ -0.94
MATR3-231	ENST00000502394	OVOL1	O14753	267 aa		9.18	□□□□□ -0.94
MATR3-231	ENST00000502394	ZNF253	O75346	499 aa		9.18	□□□□□ -0.94
MATR3-231	ENST00000502394	GALR1	P47211	349 aa		9.18	□□□□□ -0.94
MATR3-231	ENST00000502394	CD81	P60033	236 aa		9.18	□□□□□ -0.94
MATR3-231	ENST00000502394	SIGLEC15	Q6ZMC9	328 aa		9.18	□□□□□ -0.94
MATR3-231	ENST00000502394	LURAP1L	Q8IV03	231 aa		9.18	□□□□□ -0.94
MATR3-231	ENST00000502394	LINC00482	Q8N8I6	264 aa		9.18	□□□□□ -0.94
MATR3-231	ENST00000502394	TMEM158	Q8WZ71	300 aa		9.18	□□□□□ -0.94
MATR3-231	ENST00000502394	GRAMD2B	Q96HH9	432 aa		9.18	□□□□□ -0.94
MATR3-231	ENST00000502394	TXNDC17	Q9BRA2	123 aa		9.18	□□□□□ -0.94
MATR3-231	ENST00000502394	ELOVL1	Q9BW60	279 aa		9.18	□□□□□ -0.94
MATR3-231	ENST00000502394	SMDT1	Q9H4I9	107 aa		9.18	□□□□□ -0.94
MATR3-231	ENST00000502394	MLX	Q9UH92	298 aa		9.18	□□□□□ -0.94
MATR3-231	ENST00000502394	VAX2	Q9UIW0	290 aa		9.18	□□□□□ -0.94
MATR3-231	ENST00000502394	TENM1	Q9UKZ4	2725 aa		9.18	□□□□□ -0.94
MATR3-231	ENST00000502394		H3BTX0	84 aa		9.17	□□□□□ -0.94
MATR3-231	ENST00000502394	SOCS3	O14543	225 aa		9.17	□□□□□ -0.94
MATR3-231	ENST00000502394	SNRPC	P09234	159 aa	Known RBP	9.17	□□□□□ -0.94
MATR3-231	ENST00000502394	BMI1	P35226	326 aa		9.17	□□□□□ -0.94
MATR3-231	ENST00000502394	ATP5G3	P48201	142 aa		9.17	□□□□□ -0.94
MATR3-231	ENST00000502394	MEOX2	P50222	304 aa		9.17	□□□□□ -0.94
MATR3-231	ENST00000502394	UBE2G2	P60604	165 aa		9.17	□□□□□ -0.94
MATR3-231	ENST00000502394	MEF2B	Q02080	365 aa	Predicted RBP	9.17	□□□□□ -0.94
MATR3-231	ENST00000502394	LYPD1	Q8N2G4	141 aa		9.17	□□□□□ -0.94
MATR3-231	ENST00000502394	RXFP4	Q8TDU9	374 aa		9.17	□□□□□ -0.94
MATR3-231	ENST00000502394	HELT	A6NFD8	242 aa		9.16	□□□□□ -0.94
MATR3-231	ENST00000502394	C11orf94	C9JXX5	98 aa		9.16	□□□□□ -0.94
MATR3-231	ENST00000502394	SRP19	P09132	144 aa	Known RBP	9.16	□□□□□ -0.94
MATR3-231	ENST00000502394	ATF4	P18848	351 aa	Predicted RBP	9.16	□□□□□ -0.94
MATR3-231	ENST00000502394	PEA15	Q15121	130 aa		9.16	□□□□□ -0.94
MATR3-231	ENST00000502394	TCF24	Q7RTU0	167 aa		9.16	□□□□□ -0.94
MATR3-231	ENST00000502394	BLNK	Q8WV28	456 aa		9.16	□□□□□ -0.94
MATR3-231	ENST00000502394	C11orf52	Q96A22	123 aa		9.16	□□□□□ -0.94
MATR3-231	ENST00000502394	EIF5A2	Q9GZV4	153 aa	Known RBP	9.16	□□□□□ -0.94
MATR3-231	ENST00000502394		Q9H3A6	140 aa		9.16	□□□□□ -0.94
MATR3-231	ENST00000502394	ZNF331	Q9NQX6	463 aa	Predicted RBP	9.16	□□□□□ -0.94
MATR3-231	ENST00000502394	WNK1	Q9H4A3	2382 aa		9.16	□□□□□ -0.94
MATR3-231	ENST00000502394	ANK2	Q01484	3957 aa		9.15	□□□□□ -0.94
MATR3-231	ENST00000502394	TRAV8-2	A0A0B4J237	113 aa		9.15	□□□□□ -0.94
MATR3-231	ENST00000502394	NKX6-2	Q9C056	277 aa	Predicted RBP	9.15	□□□□□ -0.94
MATR3-231	ENST00000502394	OTOR	Q9NRC9	128 aa		9.15	□□□□□ -0.94
MATR3-231	ENST00000502394	ZNF785	A8K8V0	405 aa		9.14	□□□□□ -0.95
MATR3-231	ENST00000502394	TMEM250	H0YL14	139 aa		9.14	□□□□□ -0.95
MATR3-231	ENST00000502394		M0QZ24	198 aa		9.14	□□□□□ -0.95
MATR3-231	ENST00000502394	PF4	P02776	101 aa		9.14	□□□□□ -0.95
MATR3-231	ENST00000502394	RAN	P62826	216 aa	Known RBP	9.14	□□□□□ -0.95
MATR3-231	ENST00000502394	SUMO1	P63165	101 aa	Known RBP	9.14	□□□□□ -0.95
MATR3-231	ENST00000502394	DEFB114	Q30KQ6	69 aa		9.14	□□□□□ -0.95
MATR3-231	ENST00000502394	CST9LP1	Q5W188	147 aa		9.14	□□□□□ -0.95
MATR3-231	ENST00000502394	C12orf54	Q6X4T0	127 aa		9.14	□□□□□ -0.95
MATR3-231	ENST00000502394	DCANP1	Q8TF63	244 aa		9.14	□□□□□ -0.95
MATR3-231	ENST00000502394	TCEAL7	Q9BRU2	100 aa		9.14	□□□□□ -0.95
MATR3-231	ENST00000502394	SLC50A1	Q9BRV3	221 aa		9.14	□□□□□ -0.95
MATR3-231	ENST00000502394	NRN1	Q9NPD7	142 aa		9.14	□□□□□ -0.95
MATR3-231	ENST00000502394	SCO2	A0A1W2PP80	73 aa		9.13	□□□□□ -0.95
MATR3-231	ENST00000502394	TMEM218	A2RU14	115 aa		9.13	□□□□□ -0.95
MATR3-231	ENST00000502394	PGP	A6NDG6	321 aa		9.13	□□□□□ -0.95
MATR3-231	ENST00000502394		F6UZH7	168 aa		9.13	□□□□□ -0.95
MATR3-231	ENST00000502394	PDE6D	O43924	150 aa		9.13	□□□□□ -0.95
MATR3-231	ENST00000502394	PSG9	Q00887	426 aa		9.13	□□□□□ -0.95
MATR3-231	ENST00000502394	EXOC3-AS1	Q8N2X6	119 aa		9.13	□□□□□ -0.95
MATR3-231	ENST00000502394	ARL6IP6	Q8N6S5	226 aa		9.13	□□□□□ -0.95
MATR3-231	ENST00000502394	C5orf17	Q8NAS9	161 aa		9.13	□□□□□ -0.95
MATR3-231	ENST00000502394	SPATA3	Q8NHX4	192 aa		9.13	□□□□□ -0.95
MATR3-231	ENST00000502394	C2CD4C	Q8TF44	421 aa		9.13	□□□□□ -0.95
MATR3-231	ENST00000502394	CITED4	Q96RK1	184 aa		9.13	□□□□□ -0.95
MATR3-231	ENST00000502394	SLC35B3	Q9H1N7	401 aa		9.13	□□□□□ -0.95
MATR3-231	ENST00000502394	TREM1	Q9NP99	234 aa		9.13	□□□□□ -0.95
MATR3-231	ENST00000502394	TRRAP	Q9Y4A5	3859 aa		9.13	□□□□□ -0.95
MATR3-231	ENST00000502394	CMYA5	Q8N3K9	4069 aa		9.12	□□□□□ -0.95
MATR3-231	ENST00000502394	TRAV2	A0A0B4J234	112 aa		9.12	□□□□□ -0.95
MATR3-231	ENST00000502394	TRAV25	A0A0B4J276	109 aa		9.12	□□□□□ -0.95
MATR3-231	ENST00000502394		K7EQG2	157 aa		9.12	□□□□□ -0.95
MATR3-231	ENST00000502394	TSPAN4	O14817	238 aa		9.12	□□□□□ -0.95
MATR3-231	ENST00000502394	ADCYAP1	P18509	176 aa		9.12	□□□□□ -0.95
MATR3-231	ENST00000502394	HLA-DMB	P28068	263 aa		9.12	□□□□□ -0.95
MATR3-231	ENST00000502394	TMEM61	Q8N0U2	210 aa		9.12	□□□□□ -0.95

Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms