RNA–Protein interactions for RNA: ENST00000499006.6

LINC01550-201, Transcript of long intergenic non-protein coding RNA 1550, humanhuman

TSL 1 (best)

Gene LINC01550, Length 1,458 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01550-201ENST00000499006 SOCS3O14543 225 aa14.65□□□□□ -0.06
LINC01550-201ENST00000499006 SNRPCP09234 159 aaKnown RBP14.65□□□□□ -0.06
LINC01550-201ENST00000499006 UBE2L3P68036 154 aaKnown RBP14.65□□□□□ -0.06
LINC01550-201ENST00000499006 GBGT1Q8N5D6 347 aa14.65□□□□□ -0.06
LINC01550-201ENST00000499006 LRRC20Q8TCA0 184 aa14.65□□□□□ -0.06
LINC01550-201ENST00000499006 ZNF256Q9Y2P7 627 aaPredicted RBP14.65□□□□□ -0.06
LINC01550-201ENST00000499006 TRBV19A0A075B6N1 114 aa14.64□□□□□ -0.07
LINC01550-201ENST00000499006 K7EQG2 157 aa14.64□□□□□ -0.07
LINC01550-201ENST00000499006 NBEAP1P0C6P0 100 aa14.64□□□□□ -0.07
LINC01550-201ENST00000499006 MEOX2P50222 304 aa14.64□□□□□ -0.07
LINC01550-201ENST00000499006 PAFAH1B2P68402 229 aa14.64□□□□□ -0.07
LINC01550-201ENST00000499006 BLOC1S1P78537 153 aa14.64□□□□□ -0.07
LINC01550-201ENST00000499006 GUK1Q16774 197 aa14.64□□□□□ -0.07
LINC01550-201ENST00000499006 PDE6HQ13956 83 aa14.63□□□□□ -0.07
LINC01550-201ENST00000499006 SAMD5Q5TGI4 173 aa14.63□□□□□ -0.07
LINC01550-201ENST00000499006 ZNF767PQ75MW2 155 aa14.63□□□□□ -0.07
LINC01550-201ENST00000499006 LYPD6BQ8NI32 183 aa14.63□□□□□ -0.07
LINC01550-201ENST00000499006 TMPRSS5Q9H3S3 457 aa14.63□□□□□ -0.07
LINC01550-201ENST00000499006 H3BTX0 84 aa14.63□□□□□ -0.07
LINC01550-201ENST00000499006 DNASE2O00115 360 aaPredicted RBP14.63□□□□□ -0.07
LINC01550-201ENST00000499006 SLC17A3O00476 420 aa14.63□□□□□ -0.07
LINC01550-201ENST00000499006 ZNF253O75346 499 aa14.63□□□□□ -0.07
LINC01550-201ENST00000499006 NDUFB4O95168 129 aa14.63□□□□□ -0.07
LINC01550-201ENST00000499006 EGFEM1PQ0D2K5 195 aa14.63□□□□□ -0.07
LINC01550-201ENST00000499006 BEAN1Q3B7T3 259 aa14.63□□□□□ -0.07
LINC01550-201ENST00000499006 BLNKQ8WV28 456 aa14.63□□□□□ -0.07
LINC01550-201ENST00000499006 TMEM167BQ9NRX6 74 aa14.63□□□□□ -0.07
LINC01550-201ENST00000499006 G3V4G9 280 aa14.62□□□□□ -0.07
LINC01550-201ENST00000499006 TFPI2P48307 235 aa14.62□□□□□ -0.07
LINC01550-201ENST00000499006 GUCA2BQ16661 112 aa14.62□□□□□ -0.07
LINC01550-201ENST00000499006 WFDC3Q8IUB2 231 aa14.62□□□□□ -0.07
LINC01550-201ENST00000499006 ZNF331Q9NQX6 463 aaPredicted RBP14.62□□□□□ -0.07
LINC01550-201ENST00000499006 TRAV8-2A0A0B4J237 113 aa14.61□□□□□ -0.07
LINC01550-201ENST00000499006 A0A1B0GV50 99 aa14.61□□□□□ -0.07
LINC01550-201ENST00000499006 HBE1P02100 147 aa14.61□□□□□ -0.07
LINC01550-201ENST00000499006 NMBP08949 121 aa14.61□□□□□ -0.07
LINC01550-201ENST00000499006 PSMB3P49720 205 aa14.61□□□□□ -0.07
LINC01550-201ENST00000499006 CCL20P78556 96 aa14.61□□□□□ -0.07
LINC01550-201ENST00000499006 SAMD13Q5VXD3 122 aa14.61□□□□□ -0.07
LINC01550-201ENST00000499006 FAM24BQ8N5W8 94 aa14.61□□□□□ -0.07
LINC01550-201ENST00000499006 SLC50A1Q9BRV3 221 aa14.61□□□□□ -0.07
LINC01550-201ENST00000499006 OR4C46A6NHA9 309 aa14.6□□□□□ -0.07
LINC01550-201ENST00000499006 TEX46H3BTG2 121 aa14.6□□□□□ -0.07
LINC01550-201ENST00000499006 ISLRO14498 428 aa14.6□□□□□ -0.07
LINC01550-201ENST00000499006 IQCF2Q8IXL9 164 aa14.6□□□□□ -0.07
LINC01550-201ENST00000499006 PCNPQ8WW12 178 aaKnown RBP14.6□□□□□ -0.07
LINC01550-201ENST00000499006 DNAH3Q8TD57 4116 aa14.6□□□□□ -0.07
LINC01550-201ENST00000499006 C16orf92Q96LL3 132 aa14.59□□□□□ -0.07
LINC01550-201ENST00000499006 RGS13O14921 159 aa14.58□□□□□ -0.08
LINC01550-201ENST00000499006 PSG9Q00887 426 aa14.58□□□□□ -0.08
LINC01550-201ENST00000499006 PMS2P11Q13670 270 aa14.58□□□□□ -0.08
LINC01550-201ENST00000499006 IGFL4Q6B9Z1 124 aa14.58□□□□□ -0.08
LINC01550-201ENST00000499006 LYPD1Q8N2G4 141 aa14.58□□□□□ -0.08
LINC01550-201ENST00000499006 KRTAP10-11P60412 298 aa14.57□□□□□ -0.08
LINC01550-201ENST00000499006 RANP62826 216 aaKnown RBP14.57□□□□□ -0.08
LINC01550-201ENST00000499006 C20orf173Q96LM9 149 aa14.57□□□□□ -0.08
LINC01550-201ENST00000499006 A0A1W2PRE2 83 aa14.57□□□□□ -0.08
LINC01550-201ENST00000499006 HLA-DMBP28068 263 aa14.57□□□□□ -0.08
LINC01550-201ENST00000499006 ID1P41134 155 aa14.57□□□□□ -0.08
LINC01550-201ENST00000499006 EXOC3-AS1Q8N2X6 119 aa14.57□□□□□ -0.08
LINC01550-201ENST00000499006 RNF182Q8N6D2 247 aa14.57□□□□□ -0.08
LINC01550-201ENST00000499006 FAM110AQ9BQ89 295 aa14.57□□□□□ -0.08
LINC01550-201ENST00000499006 Q9H3A6 140 aa14.57□□□□□ -0.08
LINC01550-201ENST00000499006 ARL2-SNX15V9GYD0 113 aa14.57□□□□□ -0.08
LINC01550-201ENST00000499006 AGRNO00468 2067 aa14.56□□□□□ -0.08
LINC01550-201ENST00000499006 FAM74A7A6NL05 159 aa14.56□□□□□ -0.08
LINC01550-201ENST00000499006 CD7P09564 240 aa14.56□□□□□ -0.08
LINC01550-201ENST00000499006 ZNF688P0C7X2 276 aa14.56□□□□□ -0.08
LINC01550-201ENST00000499006 PPT1P50897 306 aa14.56□□□□□ -0.08
LINC01550-201ENST00000499006 SNRPD3P62318 126 aaKnown RBP14.56□□□□□ -0.08
LINC01550-201ENST00000499006 ODF3L2Q3SX64 289 aa14.56□□□□□ -0.08
LINC01550-201ENST00000499006 C19orf73Q9NVV2 129 aa14.56□□□□□ -0.08
LINC01550-201ENST00000499006 CLEC5AQ9NY25 188 aa14.56□□□□□ -0.08
LINC01550-201ENST00000499006 ZMAT5Q9UDW3 170 aaKnown RBP14.56□□□□□ -0.08
LINC01550-201ENST00000499006 YTHDF2Q9Y5A9 579 aaKnown RBP14.56□□□□□ -0.08
LINC01550-201ENST00000499006 MGAM2Q2M2H8 2515 aa14.55□□□□□ -0.08
LINC01550-201ENST00000499006 UBE2G2P60604 165 aa14.55□□□□□ -0.08
LINC01550-201ENST00000499006 KPRPQ5T749 579 aaPredicted RBP14.55□□□□□ -0.08
LINC01550-201ENST00000499006 AAMDCQ9H7C9 122 aa14.55□□□□□ -0.08
LINC01550-201ENST00000499006 MAP6D1Q9H9H5 199 aa14.55□□□□□ -0.08
LINC01550-201ENST00000499006 OTORQ9NRC9 128 aa14.55□□□□□ -0.08
LINC01550-201ENST00000499006 GGTLC3B5MD39 225 aa14.54□□□□□ -0.08
LINC01550-201ENST00000499006 RAB14P61106 215 aa14.54□□□□□ -0.08
LINC01550-201ENST00000499006 ICAM4Q14773 271 aa14.54□□□□□ -0.08
LINC01550-201ENST00000499006 PSG3Q16557 428 aa14.54□□□□□ -0.08
LINC01550-201ENST00000499006 CLLU1Q5K131 121 aa14.54□□□□□ -0.08
LINC01550-201ENST00000499006 MRPL53Q96EL3 112 aaKnown RBP14.54□□□□□ -0.08
LINC01550-201ENST00000499006 LINC00052Q96N35 136 aa14.54□□□□□ -0.08
LINC01550-201ENST00000499006 MANBALQ9NQG1 85 aa14.54□□□□□ -0.08
LINC01550-201ENST00000499006 GNG13Q9P2W3 67 aa14.54□□□□□ -0.08
LINC01550-201ENST00000499006 NBEAL1Q6ZS30 2694 aa14.53□□□□□ -0.08
LINC01550-201ENST00000499006 PGPA6NDG6 321 aa14.53□□□□□ -0.08
LINC01550-201ENST00000499006 PAGE4O60829 102 aa14.53□□□□□ -0.08
LINC01550-201ENST00000499006 CD81P60033 236 aa14.53□□□□□ -0.08
LINC01550-201ENST00000499006 PSMG4Q5JS54 123 aa14.53□□□□□ -0.08
LINC01550-201ENST00000499006 NKX6-2Q9C056 277 aaPredicted RBP14.53□□□□□ -0.08
LINC01550-201ENST00000499006 PRELID1Q9Y255 219 aa14.53□□□□□ -0.08
LINC01550-201ENST00000499006 M0R3E3 92 aa14.52□□□□□ -0.08
LINC01550-201ENST00000499006 CMC4P56277 68 aaPredicted RBP14.52□□□□□ -0.08
LINC01550-201ENST00000499006 DEFB131AP59861 70 aa14.52□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms