RNA–Protein interactions for RNA: ENST00000498280.1

RBM39-242, Transcript of RNA binding motif protein 39, humanhuman

TSL 3

Gene RBM39, Length 444 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-242ENST00000498280 SCGB2B2Q4G0G5 96 aa0.36□□□□□ -2.35
RBM39-242ENST00000498280 IFT20Q8IY31 132 aa0.36□□□□□ -2.35
RBM39-242ENST00000498280 OR5AS1Q8N127 324 aa0.36□□□□□ -2.35
RBM39-242ENST00000498280 PPTC7Q8NI37 304 aa0.36□□□□□ -2.35
RBM39-242ENST00000498280 HYLS1Q96M11 299 aa0.36□□□□□ -2.35
RBM39-242ENST00000498280 LYSMD1Q96S90 227 aa0.36□□□□□ -2.35
RBM39-242ENST00000498280 GINS3Q9BRX5 216 aa0.36□□□□□ -2.35
RBM39-242ENST00000498280 WFDC10AQ9H1F0 79 aa0.36□□□□□ -2.35
RBM39-242ENST00000498280 SH3BGRL3Q9H299 93 aa0.36□□□□□ -2.35
RBM39-242ENST00000498280 CACYBPQ9HB71 228 aaKnown RBP0.36□□□□□ -2.35
RBM39-242ENST00000498280 LYRM2Q9NU23 88 aaPredicted RBP0.36□□□□□ -2.35
RBM39-242ENST00000498280 OR52A1Q9UKL2 312 aa0.36□□□□□ -2.35
RBM39-242ENST00000498280 SSR3Q9UNL2 185 aa0.36□□□□□ -2.35
RBM39-242ENST00000498280 MUC2Q02817 5179 aa0.36□□□□□ -2.35
RBM39-242ENST00000498280 SIP14410 1827 aa0.36□□□□□ -2.35
RBM39-242ENST00000498280 CACNA1AO00555 2505 aa0.35□□□□□ -2.35
RBM39-242ENST00000498280 TRAV27A0A087WT01 109 aa0.35□□□□□ -2.35
RBM39-242ENST00000498280 C9orf170A2RU37 121 aa0.35□□□□□ -2.35
RBM39-242ENST00000498280 C5orf67F2Z3F1 127 aa0.35□□□□□ -2.35
RBM39-242ENST00000498280 RER1O15258 196 aa0.35□□□□□ -2.35
RBM39-242ENST00000498280 MFSD11O43934 449 aa0.35□□□□□ -2.35
RBM39-242ENST00000498280 PPYP01298 95 aa0.35□□□□□ -2.35
RBM39-242ENST00000498280 IFNA1P01562 189 aa0.35□□□□□ -2.35
RBM39-242ENST00000498280 IFNA14P01570 189 aa0.35□□□□□ -2.35
RBM39-242ENST00000498280 RPL19P84098 196 aaKnown RBP0.35□□□□□ -2.35
RBM39-242ENST00000498280 KLRD1Q13241 179 aa0.35□□□□□ -2.35
RBM39-242ENST00000498280 ARPINQ7Z6K5 226 aa0.35□□□□□ -2.35
RBM39-242ENST00000498280 LRRC18Q8N456 261 aa0.35□□□□□ -2.35
RBM39-242ENST00000498280 SMIM20Q8N5G0 67 aa0.35□□□□□ -2.35
RBM39-242ENST00000498280 OR13C6PQ8NH95 151 aa0.35□□□□□ -2.35
RBM39-242ENST00000498280 CDC26Q8NHZ8 85 aa0.35□□□□□ -2.35
RBM39-242ENST00000498280 ZNF431Q8TF32 576 aaPredicted RBP0.35□□□□□ -2.35
RBM39-242ENST00000498280 PSMF1Q92530 271 aa0.35□□□□□ -2.35
RBM39-242ENST00000498280 PBDC1Q9BVG4 233 aa0.35□□□□□ -2.35
RBM39-242ENST00000498280 UHRF1BP1Q6BDS2 1440 aa0.35□□□□□ -2.35
RBM39-242ENST00000498280 NUP210LQ5VU65 1888 aa0.35□□□□□ -2.35
RBM39-242ENST00000498280 MDN1Q9NU22 5596 aa0.34□□□□□ -2.35
RBM39-242ENST00000498280 TRAV23DV6A0A075B6W5 121 aa0.34□□□□□ -2.36
RBM39-242ENST00000498280 hDV103S1A0JD37 113 aa0.34□□□□□ -2.36
RBM39-242ENST00000498280 JMJD7-PLA2G4BH0Y9G9 81 aa0.34□□□□□ -2.36
RBM39-242ENST00000498280 IGLV3-1P01715 115 aa0.34□□□□□ -2.36
RBM39-242ENST00000498280 APOA2P02652 100 aa0.34□□□□□ -2.36
RBM39-242ENST00000498280 CSN2P05814 226 aa0.34□□□□□ -2.36
RBM39-242ENST00000498280 IDO1P14902 403 aa0.34□□□□□ -2.36
RBM39-242ENST00000498280 PPP1R2P41236 205 aa0.34□□□□□ -2.36
RBM39-242ENST00000498280 GNG3P63215 75 aa0.34□□□□□ -2.36
RBM39-242ENST00000498280 COL24A1Q17RW2 1714 aa0.34□□□□□ -2.36
RBM39-242ENST00000498280 GLIPR1L1Q6UWM5 242 aa0.34□□□□□ -2.36
RBM39-242ENST00000498280 LINC00575Q6W349 94 aa0.34□□□□□ -2.36
RBM39-242ENST00000498280 AP3S1Q92572 193 aa0.34□□□□□ -2.36
RBM39-242ENST00000498280 MAP1LC3BQ9GZQ8 125 aa0.34□□□□□ -2.36
RBM39-242ENST00000498280 STOML2Q9UJZ1 356 aa0.34□□□□□ -2.36
RBM39-242ENST00000498280 RNF11Q9Y3C5 154 aa0.34□□□□□ -2.36
RBM39-242ENST00000498280 UNC13CQ8NB66 2214 aa0.34□□□□□ -2.36
RBM39-242ENST00000498280 N4BP2Q86UW6 1770 aaPredicted RBP0.34□□□□□ -2.36
RBM39-242ENST00000498280 UBR2Q8IWV8 1755 aa0.34□□□□□ -2.36
RBM39-242ENST00000498280 CITO14578 2027 aa0.33□□□□□ -2.36
RBM39-242ENST00000498280 KIAA1109Q2LD37 5005 aa0.33□□□□□ -2.36
RBM39-242ENST00000498280 CD109Q6YHK3 1445 aa0.33□□□□□ -2.36
RBM39-242ENST00000498280 HIST1H2BKO60814 126 aa0.33□□□□□ -2.36
RBM39-242ENST00000498280 IFNA4P05014 189 aa0.33□□□□□ -2.36
RBM39-242ENST00000498280 HIST1H2BJP06899 126 aa0.33□□□□□ -2.36
RBM39-242ENST00000498280 GLRXP35754 106 aa0.33□□□□□ -2.36
RBM39-242ENST00000498280 TAS2R41P59536 307 aa0.33□□□□□ -2.36
RBM39-242ENST00000498280 LTC4SQ16873 150 aa0.33□□□□□ -2.36
RBM39-242ENST00000498280 FKBP1CQ5VVH2 108 aa0.33□□□□□ -2.36
RBM39-242ENST00000498280 C1orf140Q5VVS0 124 aa0.33□□□□□ -2.36
RBM39-242ENST00000498280 LYG2Q86SG7 212 aa0.33□□□□□ -2.36
RBM39-242ENST00000498280 OR10AG1Q8NH19 301 aa0.33□□□□□ -2.36
RBM39-242ENST00000498280 MALSU1Q96EH3 234 aa0.33□□□□□ -2.36
RBM39-242ENST00000498280 HOPXQ9BPY8 73 aaPredicted RBP0.33□□□□□ -2.36
RBM39-242ENST00000498280 MYO18AQ92614 2054 aaKnown RBP0.33□□□□□ -2.36
RBM39-242ENST00000498280 PTPRFP10586 1907 aa0.32□□□□□ -2.36
RBM39-242ENST00000498280 MYLKQ15746 1914 aa0.32□□□□□ -2.36
RBM39-242ENST00000498280 TTC28Q96AY4 2481 aa0.32□□□□□ -2.36
RBM39-242ENST00000498280 FRMPD1Q5SYB0 1578 aa0.32□□□□□ -2.36
RBM39-242ENST00000498280 TRPM1Q7Z4N2 1603 aa0.32□□□□□ -2.36
RBM39-242ENST00000498280 CHD3Q12873 2000 aaKnown RBP0.32□□□□□ -2.36
RBM39-242ENST00000498280 TRAV5A0A0B4J249 113 aa0.32□□□□□ -2.36
RBM39-242ENST00000498280 CD14P08571 375 aa0.32□□□□□ -2.36
RBM39-242ENST00000498280 VBP1P61758 197 aa0.32□□□□□ -2.36
RBM39-242ENST00000498280 HBBP68871 147 aa0.32□□□□□ -2.36
RBM39-242ENST00000498280 MIR22HGQ0VDD5 57 aa0.32□□□□□ -2.36
RBM39-242ENST00000498280 CIRBPQ14011 172 aaKnown RBP0.32□□□□□ -2.36
RBM39-242ENST00000498280 SPATA45Q537H7 98 aa0.32□□□□□ -2.36
RBM39-242ENST00000498280 TMED4Q7Z7H5 227 aa0.32□□□□□ -2.36
RBM39-242ENST00000498280 FAM216BQ8N7L0 139 aa0.32□□□□□ -2.36
RBM39-242ENST00000498280 NUP35Q8NFH5 326 aa0.32□□□□□ -2.36
RBM39-242ENST00000498280 OR10AC1Q8NH08 325 aa0.32□□□□□ -2.36
RBM39-242ENST00000498280 CARD19Q96LW7 228 aa0.32□□□□□ -2.36
RBM39-242ENST00000498280 UFC1Q9Y3C8 167 aa0.32□□□□□ -2.36
RBM39-242ENST00000498280 TET1Q8NFU7 2136 aa0.32□□□□□ -2.36
RBM39-242ENST00000498280 MED12Q93074 2177 aa0.32□□□□□ -2.36
RBM39-242ENST00000498280 EIF3AQ14152 1382 aaKnown RBP0.32□□□□□ -2.36
RBM39-242ENST00000498280 NCAPD3P42695 1498 aa0.31□□□□□ -2.36
RBM39-242ENST00000498280 CAMSAP2Q08AD1 1489 aa0.31□□□□□ -2.36
RBM39-242ENST00000498280 NUPR2A6NF83 97 aa0.31□□□□□ -2.36
RBM39-242ENST00000498280 TMEM238C9JI98 176 aa0.31□□□□□ -2.36
RBM39-242ENST00000498280 GPR31O00270 319 aa0.31□□□□□ -2.36
RBM39-242ENST00000498280 LYRM1O43325 122 aa0.31□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms