RNA–Protein interactions for RNA: ENST00000498223.3

CTTN-208, Transcript of cortactin, humanhuman

TSL 3

Gene CTTN, Length 523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-208ENST00000498223 LINC00052Q96N35 136 aa8.57□□□□□ -1.04
CTTN-208ENST00000498223 TMEM14CQ9P0S9 112 aa8.57□□□□□ -1.04
CTTN-208ENST00000498223 A0A087X0K7 114 aa8.56□□□□□ -1.04
CTTN-208ENST00000498223 OR11H12B2RN74 326 aa8.56□□□□□ -1.04
CTTN-208ENST00000498223 ARL14EPLP0DKL9 152 aa8.56□□□□□ -1.04
CTTN-208ENST00000498223 HIST1H1EP10412 219 aaKnown RBP8.56□□□□□ -1.04
CTTN-208ENST00000498223 GUK1Q16774 197 aa8.56□□□□□ -1.04
CTTN-208ENST00000498223 ALKAL2Q6UX46 152 aa8.56□□□□□ -1.04
CTTN-208ENST00000498223 PQLC2Q6ZP29 291 aa8.56□□□□□ -1.04
CTTN-208ENST00000498223 DCANP1Q8TF63 244 aa8.56□□□□□ -1.04
CTTN-208ENST00000498223 FAM167A-AS1Q96KT0 104 aa8.56□□□□□ -1.04
CTTN-208ENST00000498223 C17orf77Q96MU5 243 aa8.56□□□□□ -1.04
CTTN-208ENST00000498223 MAP1LC3B2A6NCE7 125 aa8.55□□□□□ -1.04
CTTN-208ENST00000498223 H3BQ15 152 aa8.55□□□□□ -1.04
CTTN-208ENST00000498223 ISLRO14498 428 aa8.55□□□□□ -1.04
CTTN-208ENST00000498223 MRPS12O15235 138 aaKnown RBP8.55□□□□□ -1.04
CTTN-208ENST00000498223 CXorf1O96002 111 aa8.55□□□□□ -1.04
CTTN-208ENST00000498223 NBEAP1P0C6P0 100 aa8.55□□□□□ -1.04
CTTN-208ENST00000498223 PSMB3P49720 205 aa8.55□□□□□ -1.04
CTTN-208ENST00000498223 FHITP49789 147 aa8.55□□□□□ -1.04
CTTN-208ENST00000498223 RAB5CP51148 216 aa8.55□□□□□ -1.04
CTTN-208ENST00000498223 DEFB131AP59861 70 aa8.55□□□□□ -1.04
CTTN-208ENST00000498223 PSMG4Q5JS54 123 aa8.55□□□□□ -1.04
CTTN-208ENST00000498223 FAM74A1Q5RGS3 127 aa8.55□□□□□ -1.04
CTTN-208ENST00000498223 IGFL4Q6B9Z1 124 aa8.55□□□□□ -1.04
CTTN-208ENST00000498223 DPPA3Q6W0C5 159 aa8.55□□□□□ -1.04
CTTN-208ENST00000498223 FAM24BQ8N5W8 94 aa8.55□□□□□ -1.04
CTTN-208ENST00000498223 SLC50A1Q9BRV3 221 aa8.55□□□□□ -1.04
CTTN-208ENST00000498223 MAP1LC3BQ9GZQ8 125 aa8.55□□□□□ -1.04
CTTN-208ENST00000498223 HRH4Q9H3N8 390 aa8.55□□□□□ -1.04
CTTN-208ENST00000498223 AAMDCQ9H7C9 122 aa8.55□□□□□ -1.04
CTTN-208ENST00000498223 TUBA4BQ9H853 241 aa8.55□□□□□ -1.04
CTTN-208ENST00000498223 AURKAIP1Q9NWT8 199 aaPredicted RBP8.55□□□□□ -1.04
CTTN-208ENST00000498223 ZNF586Q9NXT0 402 aa8.55□□□□□ -1.04
CTTN-208ENST00000498223 PLA2G2EQ9NZK7 142 aa8.55□□□□□ -1.04
CTTN-208ENST00000498223 A0A1B0GV50 99 aa8.54□□□□□ -1.04
CTTN-208ENST00000498223 H2AFB1P0C5Y9 115 aa8.54□□□□□ -1.04
CTTN-208ENST00000498223 STAG3L2P0CL84 134 aa8.54□□□□□ -1.04
CTTN-208ENST00000498223 STAG3L3P0CL85 134 aa8.54□□□□□ -1.04
CTTN-208ENST00000498223 IGLC2P0DOY2 106 aa8.54□□□□□ -1.04
CTTN-208ENST00000498223 GCHFRP30047 84 aa8.54□□□□□ -1.04
CTTN-208ENST00000498223 SULT1A2P50226 295 aa8.54□□□□□ -1.04
CTTN-208ENST00000498223 FGF8P55075 233 aaPredicted RBP8.54□□□□□ -1.04
CTTN-208ENST00000498223 PSG9Q00887 426 aa8.54□□□□□ -1.04
CTTN-208ENST00000498223 ZNF726P1Q15940 193 aa8.54□□□□□ -1.04
CTTN-208ENST00000498223 DEFB121Q5J5C9 76 aa8.54□□□□□ -1.04
CTTN-208ENST00000498223 SSX7Q7RTT5 188 aa8.54□□□□□ -1.04
CTTN-208ENST00000498223 APRG1Q8IVJ8 170 aa8.54□□□□□ -1.04
CTTN-208ENST00000498223 DEFB125Q8N687 156 aa8.54□□□□□ -1.04
CTTN-208ENST00000498223 ZNF738Q8NE65 137 aa8.54□□□□□ -1.04
CTTN-208ENST00000498223 SFT2D1Q8WV19 159 aa8.54□□□□□ -1.04
CTTN-208ENST00000498223 FXYD5Q96DB9 178 aa8.54□□□□□ -1.04
CTTN-208ENST00000498223 PHYHIPLQ96FC7 376 aa8.54□□□□□ -1.04
CTTN-208ENST00000498223 MAP6D1Q9H9H5 199 aa8.54□□□□□ -1.04
CTTN-208ENST00000498223 TRBV19A0A075B6N1 114 aa8.53□□□□□ -1.04
CTTN-208ENST00000498223 ZNF705EA8MWA4 302 aaPredicted RBP8.53□□□□□ -1.04
CTTN-208ENST00000498223 TEX46H3BTG2 121 aa8.53□□□□□ -1.04
CTTN-208ENST00000498223 RANP62826 216 aaKnown RBP8.53□□□□□ -1.04
CTTN-208ENST00000498223 ODF3L2Q3SX64 289 aa8.53□□□□□ -1.04
CTTN-208ENST00000498223 RNF182Q8N6D2 247 aa8.53□□□□□ -1.04
CTTN-208ENST00000498223 ZNF503Q96F45 646 aa8.53□□□□□ -1.04
CTTN-208ENST00000498223 WFDC10AQ9H1F0 79 aa8.53□□□□□ -1.04
CTTN-208ENST00000498223 TMEM167BQ9NRX6 74 aa8.53□□□□□ -1.04
CTTN-208ENST00000498223 SLC17A3O00476 420 aa8.52□□□□□ -1.05
CTTN-208ENST00000498223 SOCS3O14543 225 aa8.52□□□□□ -1.05
CTTN-208ENST00000498223 HLA-DMBP28068 263 aa8.52□□□□□ -1.05
CTTN-208ENST00000498223 PDE6HQ13956 83 aa8.52□□□□□ -1.05
CTTN-208ENST00000498223 PSG3Q16557 428 aa8.52□□□□□ -1.05
CTTN-208ENST00000498223 STHQ8IWL8 128 aa8.52□□□□□ -1.05
CTTN-208ENST00000498223 Q8N1Y9 231 aa8.52□□□□□ -1.05
CTTN-208ENST00000498223 MRAPQ8TCY5 172 aa8.52□□□□□ -1.05
CTTN-208ENST00000498223 SRD5A3Q9H8P0 318 aa8.52□□□□□ -1.05
CTTN-208ENST00000498223 ZNF331Q9NQX6 463 aaPredicted RBP8.52□□□□□ -1.05
CTTN-208ENST00000498223 TRAV8-2A0A0B4J237 113 aa8.51□□□□□ -1.05
CTTN-208ENST00000498223 KNCNA6PVL3 124 aa8.51□□□□□ -1.05
CTTN-208ENST00000498223 ZNF253O75346 499 aa8.51□□□□□ -1.05
CTTN-208ENST00000498223 IFNA7P01567 189 aa8.51□□□□□ -1.05
CTTN-208ENST00000498223 PRB4P10163 310 aaPredicted RBP8.51□□□□□ -1.05
CTTN-208ENST00000498223 UBE2G2P60604 165 aa8.51□□□□□ -1.05
CTTN-208ENST00000498223 ICAM4Q14773 271 aa8.51□□□□□ -1.05
CTTN-208ENST00000498223 ZNF124Q15973 351 aa8.51□□□□□ -1.05
CTTN-208ENST00000498223 EBLN2Q6P2I7 272 aa8.51□□□□□ -1.05
CTTN-208ENST00000498223 EXOC3-AS1Q8N2X6 119 aa8.51□□□□□ -1.05
CTTN-208ENST00000498223 MBD3L1Q8WWY6 194 aa8.51□□□□□ -1.05
CTTN-208ENST00000498223 SAT2Q96F10 170 aaPredicted RBP8.51□□□□□ -1.05
CTTN-208ENST00000498223 C20orf173Q96LM9 149 aa8.51□□□□□ -1.05
CTTN-208ENST00000498223 FAM110AQ9BQ89 295 aa8.51□□□□□ -1.05
CTTN-208ENST00000498223 Q9H3A6 140 aa8.51□□□□□ -1.05
CTTN-208ENST00000498223 TMPRSS5Q9H3S3 457 aa8.51□□□□□ -1.05
CTTN-208ENST00000498223 CLEC5AQ9NY25 188 aa8.51□□□□□ -1.05
CTTN-208ENST00000498223 RPH3ALQ9UNE2 315 aa8.51□□□□□ -1.05
CTTN-208ENST00000498223 PGPA6NDG6 321 aa8.5□□□□□ -1.05
CTTN-208ENST00000498223 K7EIL1 84 aa8.5□□□□□ -1.05
CTTN-208ENST00000498223 NDUFB4O95168 129 aa8.5□□□□□ -1.05
CTTN-208ENST00000498223 HBE1P02100 147 aa8.5□□□□□ -1.05
CTTN-208ENST00000498223 IGHV4-30-4P0DP06 118 aa8.5□□□□□ -1.05
CTTN-208ENST00000498223 RPL35AP18077 110 aaKnown RBP8.5□□□□□ -1.05
CTTN-208ENST00000498223 CSN1S1P47710 185 aa8.5□□□□□ -1.05
CTTN-208ENST00000498223 DEFB1P60022 68 aa8.5□□□□□ -1.05
CTTN-208ENST00000498223 BLOC1S1P78537 153 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms