RNA–Protein interactions for RNA: ENST00000498213.1

USP54-217, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 815 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-217ENST00000498213 H3BNG1 76 aa2.73□□□□□ -1.97
USP54-217ENST00000498213 K7EQG2 157 aa2.73□□□□□ -1.97
USP54-217ENST00000498213 GPR31O00270 319 aa2.73□□□□□ -1.97
USP54-217ENST00000498213 SULT1C2O00338 296 aa2.73□□□□□ -1.97
USP54-217ENST00000498213 DEFB4AO15263 64 aa2.73□□□□□ -1.97
USP54-217ENST00000498213 ST8SIA3O43173 380 aa2.73□□□□□ -1.97
USP54-217ENST00000498213 CLN5O75503 358 aa2.73□□□□□ -1.97
USP54-217ENST00000498213 PGLYRP1O75594 196 aaPredicted RBP2.73□□□□□ -1.97
USP54-217ENST00000498213 ZNF705DP0CH99 300 aaPredicted RBP2.73□□□□□ -1.97
USP54-217ENST00000498213 ZNF705BP0CI00 300 aaPredicted RBP2.73□□□□□ -1.97
USP54-217ENST00000498213 NFYAP23511 347 aaPredicted RBP2.73□□□□□ -1.97
USP54-217ENST00000498213 HLA-DMBP28068 263 aa2.73□□□□□ -1.97
USP54-217ENST00000498213 TSPOP30536 169 aa2.73□□□□□ -1.97
USP54-217ENST00000498213 SNCAP37840 140 aa2.73□□□□□ -1.97
USP54-217ENST00000498213 ID1P41134 155 aa2.73□□□□□ -1.97
USP54-217ENST00000498213 CCR6P51684 374 aa2.73□□□□□ -1.97
USP54-217ENST00000498213 WT1-ASQ06250 92 aa2.73□□□□□ -1.97
USP54-217ENST00000498213 C10orf55Q5SWW7 151 aa2.73□□□□□ -1.97
USP54-217ENST00000498213 TRIQKQ629K1 86 aa2.73□□□□□ -1.97
USP54-217ENST00000498213 OR8G2PQ6IF36 304 aa2.73□□□□□ -1.97
USP54-217ENST00000498213 TCF24Q7RTU0 167 aa2.73□□□□□ -1.97
USP54-217ENST00000498213 H2BFWTQ7Z2G1 175 aa2.73□□□□□ -1.97
USP54-217ENST00000498213 TMEM17Q86X19 198 aa2.73□□□□□ -1.97
USP54-217ENST00000498213 UBE2DNLQ8IWF7 75 aa2.73□□□□□ -1.97
USP54-217ENST00000498213 CSNK1G2-AS1Q8NCQ2 148 aa2.73□□□□□ -1.97
USP54-217ENST00000498213 OR11H4Q8NGC9 324 aa2.73□□□□□ -1.97
USP54-217ENST00000498213 OR4C16Q8NGL9 310 aa2.73□□□□□ -1.97
USP54-217ENST00000498213 OR1S2Q8NGQ3 325 aa2.73□□□□□ -1.97
USP54-217ENST00000498213 OR6F1Q8NGZ6 308 aa2.73□□□□□ -1.97
USP54-217ENST00000498213 OR4A16Q8NH70 328 aa2.73□□□□□ -1.97
USP54-217ENST00000498213 DCANP1Q8TF63 244 aa2.73□□□□□ -1.97
USP54-217ENST00000498213 MAFIPQ8WZ33 124 aa2.73□□□□□ -1.97
USP54-217ENST00000498213 RASL10AQ92737 203 aa2.73□□□□□ -1.97
USP54-217ENST00000498213 MRGPRFQ96AM1 343 aa2.73□□□□□ -1.97
USP54-217ENST00000498213 S100A16Q96FQ6 103 aaKnown RBP2.73□□□□□ -1.97
USP54-217ENST00000498213 PDCD10Q9BUL8 212 aa2.73□□□□□ -1.97
USP54-217ENST00000498213 SLC5A7Q9GZV3 580 aa2.73□□□□□ -1.97
USP54-217ENST00000498213 MAGT1Q9H0U3 335 aa2.73□□□□□ -1.97
USP54-217ENST00000498213 MS4A6AQ9H2W1 248 aa2.73□□□□□ -1.97
USP54-217ENST00000498213 RABL2AQ9UBK7 228 aaPredicted RBP2.73□□□□□ -1.97
USP54-217ENST00000498213 MTFP1Q9UDX5 166 aa2.73□□□□□ -1.97
USP54-217ENST00000498213 RABL2BQ9UNT1 228 aa2.73□□□□□ -1.97
USP54-217ENST00000498213 FLVCR2Q9UPI3 526 aa2.73□□□□□ -1.97
USP54-217ENST00000498213 OR51B2Q9Y5P1 312 aa2.73□□□□□ -1.97
USP54-217ENST00000498213 RFNGQ9Y644 331 aa2.73□□□□□ -1.97
USP54-217ENST00000498213 IGKV1D-13A0A0B4J2D9 117 aa2.72□□□□□ -1.97
USP54-217ENST00000498213 LYRM9A8MSI8 78 aa2.72□□□□□ -1.97
USP54-217ENST00000498213 ADAP1O75689 374 aa2.72□□□□□ -1.97
USP54-217ENST00000498213 TMEM50AO95807 157 aa2.72□□□□□ -1.97
USP54-217ENST00000498213 MT-CO2P00403 227 aa2.72□□□□□ -1.97
USP54-217ENST00000498213 CD3DP04234 171 aa2.72□□□□□ -1.97
USP54-217ENST00000498213 APELAP0DMC3 54 aa2.72□□□□□ -1.97
USP54-217ENST00000498213 IGKV1-13P0DP09 117 aa2.72□□□□□ -1.97
USP54-217ENST00000498213 HLA-DRB4P13762 266 aa2.72□□□□□ -1.97
USP54-217ENST00000498213 RPL35AP18077 110 aaKnown RBP2.72□□□□□ -1.97
USP54-217ENST00000498213 GATA2P23769 480 aaPredicted RBP2.72□□□□□ -1.97
USP54-217ENST00000498213 HLA-DMAP28067 261 aa2.72□□□□□ -1.97
USP54-217ENST00000498213 PRSS3P35030 304 aa2.72□□□□□ -1.97
USP54-217ENST00000498213 HTR2BP41595 481 aa2.72□□□□□ -1.97
USP54-217ENST00000498213 PSMB3P49720 205 aa2.72□□□□□ -1.97
USP54-217ENST00000498213 BCAP31P51572 246 aa2.72□□□□□ -1.97
USP54-217ENST00000498213 DEFA1P59665 94 aa2.72□□□□□ -1.97
USP54-217ENST00000498213 DEFA3P59666 94 aa2.72□□□□□ -1.97
USP54-217ENST00000498213 DEFB131AP59861 70 aa2.72□□□□□ -1.97
USP54-217ENST00000498213 RND3P61587 244 aa2.72□□□□□ -1.97
USP54-217ENST00000498213 SURF2Q15527 256 aaPredicted RBP2.72□□□□□ -1.97
USP54-217ENST00000498213 BSXQ3C1V8 233 aa2.72□□□□□ -1.97
USP54-217ENST00000498213 TOMM20LQ6UXN7 152 aa2.72□□□□□ -1.97
USP54-217ENST00000498213 FOXI2Q6ZQN5 318 aa2.72□□□□□ -1.97
USP54-217ENST00000498213 VKORC1L1Q8N0U8 176 aa2.72□□□□□ -1.97
USP54-217ENST00000498213 TMEM256Q8N2U0 113 aa2.72□□□□□ -1.97
USP54-217ENST00000498213 TOMM5Q8N4H5 51 aa2.72□□□□□ -1.97
USP54-217ENST00000498213 ARRDC1Q8N5I2 433 aa2.72□□□□□ -1.97
USP54-217ENST00000498213 OR13C8Q8NGS7 320 aa2.72□□□□□ -1.97
USP54-217ENST00000498213 OR51H1Q8NH63 302 aa2.72□□□□□ -1.97
USP54-217ENST00000498213 Q8WTZ3 238 aa2.72□□□□□ -1.97
USP54-217ENST00000498213 GPR82Q96P67 336 aa2.72□□□□□ -1.97
USP54-217ENST00000498213 CHRDL1Q9BU40 450 aa2.72□□□□□ -1.97
USP54-217ENST00000498213 ENY2Q9NPA8 101 aa2.72□□□□□ -1.97
USP54-217ENST00000498213 NRN1Q9NPD7 142 aa2.72□□□□□ -1.97
USP54-217ENST00000498213 CCL28Q9NRJ3 127 aa2.72□□□□□ -1.97
USP54-217ENST00000498213 TP53TG3Q9ULZ0 132 aa2.72□□□□□ -1.97
USP54-217ENST00000498213 GOLT1BQ9Y3E0 138 aa2.72□□□□□ -1.97
USP54-217ENST00000498213 TMED3Q9Y3Q3 217 aa2.72□□□□□ -1.97
USP54-217ENST00000498213 ALG5Q9Y673 324 aa2.72□□□□□ -1.97
USP54-217ENST00000498213 HLA-DRB4X5D2U9 266 aa2.72□□□□□ -1.97
USP54-217ENST00000498213 TRAV6A0A075B6T7 132 aa2.71□□□□□ -1.98
USP54-217ENST00000498213 FAM240BA0A1B0GVZ2 78 aa2.71□□□□□ -1.98
USP54-217ENST00000498213 C7orf66A4D0T2 115 aa2.71□□□□□ -1.98
USP54-217ENST00000498213 BOLA2-SMG1P6H3BVE0 249 aa2.71□□□□□ -1.98
USP54-217ENST00000498213 ISLRO14498 428 aa2.71□□□□□ -1.98
USP54-217ENST00000498213 S1PR2O95136 353 aa2.71□□□□□ -1.98
USP54-217ENST00000498213 NDUFB6O95139 128 aa2.71□□□□□ -1.98
USP54-217ENST00000498213 KRASP01116 189 aa2.71□□□□□ -1.98
USP54-217ENST00000498213 HBE1P02100 147 aa2.71□□□□□ -1.98
USP54-217ENST00000498213 PMP2P02689 132 aa2.71□□□□□ -1.98
USP54-217ENST00000498213 TCRBP04435 133 aa2.71□□□□□ -1.98
USP54-217ENST00000498213 GIG44P09565 113 aaPredicted RBP2.71□□□□□ -1.98
USP54-217ENST00000498213 AZU1P20160 251 aa2.71□□□□□ -1.98
USP54-217ENST00000498213 RCVRNP35243 200 aa2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms