RNA–Protein interactions for RNA: ENST00000498041.1

RIF1-212, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 776 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-212ENST00000498041 SLC25A21Q9BQT8 299 aaPredicted RBP1.65□□□□□ -2.15
RIF1-212ENST00000498041 C7orf50Q9BRJ6 194 aaKnown RBP1.65□□□□□ -2.15
RIF1-212ENST00000498041 ZNF471Q9BX82 626 aaPredicted RBP1.65□□□□□ -2.15
RIF1-212ENST00000498041 PARD6GQ9BYG4 376 aaPredicted RBP1.65□□□□□ -2.15
RIF1-212ENST00000498041 TMEM133Q9H2Q1 129 aa1.65□□□□□ -2.15
RIF1-212ENST00000498041 ZNF430Q9H8G1 570 aaPredicted RBP1.65□□□□□ -2.15
RIF1-212ENST00000498041 SLC35D1Q9NTN3 355 aa1.65□□□□□ -2.15
RIF1-212ENST00000498041 CACFD1Q9UGQ2 172 aa1.65□□□□□ -2.15
RIF1-212ENST00000498041 ATPIF1Q9UII2 106 aa1.65□□□□□ -2.15
RIF1-212ENST00000498041 C14orf166Q9Y224 244 aaKnown RBP1.65□□□□□ -2.15
RIF1-212ENST00000498041 TMEM56-RWDD3S4R434 201 aa1.65□□□□□ -2.15
RIF1-212ENST00000498041 ZFHX3Q15911 3703 aa1.65□□□□□ -2.15
RIF1-212ENST00000498041 PRRC2CQ9Y520 2896 aaKnown RBP1.65□□□□□ -2.15
RIF1-212ENST00000498041 SPTBN1Q01082 2364 aaKnown RBP1.65□□□□□ -2.15
RIF1-212ENST00000498041 GPR98Q8WXG9 6306 aa1.65□□□□□ -2.15
RIF1-212ENST00000498041 PDZD2O15018 2839 aa1.64□□□□□ -2.15
RIF1-212ENST00000498041 ZZEF1O43149 2961 aa1.64□□□□□ -2.15
RIF1-212ENST00000498041 SMG1Q96Q15 3661 aaKnown RBP1.64□□□□□ -2.15
RIF1-212ENST00000498041 TRAV40A0A0B4J280 105 aa1.64□□□□□ -2.15
RIF1-212ENST00000498041 KIR2DS1A0A191URI9 304 aa1.64□□□□□ -2.15
RIF1-212ENST00000498041 UBE2L5PA0A1B0GUS4 154 aa1.64□□□□□ -2.15
RIF1-212ENST00000498041 ZNF729A6NN14 1252 aaPredicted RBP1.64□□□□□ -2.15
RIF1-212ENST00000498041 CEBPZOSA8MTT3 80 aa1.64□□□□□ -2.15
RIF1-212ENST00000498041 PPP5D1E7EU14 171 aa1.64□□□□□ -2.15
RIF1-212ENST00000498041 H0Y980 276 aa1.64□□□□□ -2.15
RIF1-212ENST00000498041 H7C2Y5 167 aa1.64□□□□□ -2.15
RIF1-212ENST00000498041 DNASE2O00115 360 aaPredicted RBP1.64□□□□□ -2.15
RIF1-212ENST00000498041 CORTO00230 105 aa1.64□□□□□ -2.15
RIF1-212ENST00000498041 RAB29O14966 203 aa1.64□□□□□ -2.15
RIF1-212ENST00000498041 FGF16O43320 207 aa1.64□□□□□ -2.15
RIF1-212ENST00000498041 SYNGR2O43760 224 aa1.64□□□□□ -2.15
RIF1-212ENST00000498041 OR2J3O76001 311 aa1.64□□□□□ -2.15
RIF1-212ENST00000498041 FSTL3O95633 263 aa1.64□□□□□ -2.15
RIF1-212ENST00000498041 IGHV3-11P01762 117 aa1.64□□□□□ -2.15
RIF1-212ENST00000498041 TRAPPC2P0DI81 140 aa1.64□□□□□ -2.15
RIF1-212ENST00000498041 TRAPPC2BP0DI82 140 aa1.64□□□□□ -2.15
RIF1-212ENST00000498041 OR13C7P0DN81 318 aa1.64□□□□□ -2.15
RIF1-212ENST00000498041 PYYP10082 97 aa1.64□□□□□ -2.15
RIF1-212ENST00000498041 S100A11P31949 105 aa1.64□□□□□ -2.15
RIF1-212ENST00000498041 CBX5P45973 191 aa1.64□□□□□ -2.15
RIF1-212ENST00000498041 ATP5G3P48201 142 aa1.64□□□□□ -2.15
RIF1-212ENST00000498041 EFNA4P52798 201 aa1.64□□□□□ -2.15
RIF1-212ENST00000498041 TAS2R46P59540 309 aa1.64□□□□□ -2.15
RIF1-212ENST00000498041 BPIFB3P59826 476 aa1.64□□□□□ -2.15
RIF1-212ENST00000498041 KRTAP10-10P60014 251 aa1.64□□□□□ -2.15
RIF1-212ENST00000498041 UBE2G2P60604 165 aa1.64□□□□□ -2.15
RIF1-212ENST00000498041 GNG5P63218 68 aa1.64□□□□□ -2.15
RIF1-212ENST00000498041 MRPS10P82664 201 aaKnown RBP1.64□□□□□ -2.15
RIF1-212ENST00000498041 SSBP1Q04837 148 aaKnown RBP1.64□□□□□ -2.15
RIF1-212ENST00000498041 KIAA0087Q14695 138 aa1.64□□□□□ -2.15
RIF1-212ENST00000498041 TNXAQ16473 311 aa1.64□□□□□ -2.15
RIF1-212ENST00000498041 TMEM183BQ1AE95 376 aa1.64□□□□□ -2.15
RIF1-212ENST00000498041 HLA-DRB5Q30154 266 aa1.64□□□□□ -2.15
RIF1-212ENST00000498041 DEFB116Q30KQ4 102 aa1.64□□□□□ -2.15
RIF1-212ENST00000498041 SMIM21Q3B7S5 101 aa1.64□□□□□ -2.15
RIF1-212ENST00000498041 TPTE2P1Q5T6R2 138 aa1.64□□□□□ -2.15
RIF1-212ENST00000498041 TMEM14EPQ6UXP3 125 aa1.64□□□□□ -2.15
RIF1-212ENST00000498041 LINC00322Q6ZN03 302 aaPredicted RBP1.64□□□□□ -2.15
RIF1-212ENST00000498041 Q6ZS49 121 aa1.64□□□□□ -2.15
RIF1-212ENST00000498041 PCP2Q8IVA1 136 aa1.64□□□□□ -2.15
RIF1-212ENST00000498041 TMEM183AQ8IXX5 376 aa1.64□□□□□ -2.15
RIF1-212ENST00000498041 PUSL1Q8N0Z8 303 aaKnown RBP1.64□□□□□ -2.15
RIF1-212ENST00000498041 LGI3Q8N145 548 aa1.64□□□□□ -2.15
RIF1-212ENST00000498041 ZNF645Q8N7E2 425 aa1.64□□□□□ -2.15
RIF1-212ENST00000498041 SREK1IP1Q8N9Q2 155 aaPredicted RBP1.64□□□□□ -2.15
RIF1-212ENST00000498041 LFNGQ8NES3 379 aa1.64□□□□□ -2.15
RIF1-212ENST00000498041 OR5D13Q8NGL4 314 aa1.64□□□□□ -2.15
RIF1-212ENST00000498041 OR5C1Q8NGR4 320 aa1.64□□□□□ -2.15
RIF1-212ENST00000498041 RXFP4Q8TDU9 374 aa1.64□□□□□ -2.15
RIF1-212ENST00000498041 DEFB104AQ8WTQ1 72 aa1.64□□□□□ -2.15
RIF1-212ENST00000498041 GALNT14Q96FL9 552 aa1.64□□□□□ -2.15
RIF1-212ENST00000498041 P2RX4Q99571 388 aa1.64□□□□□ -2.15
RIF1-212ENST00000498041 PHB2Q99623 299 aa1.64□□□□□ -2.15
RIF1-212ENST00000498041 CCL19Q99731 98 aa1.64□□□□□ -2.15
RIF1-212ENST00000498041 TOLLIPQ9H0E2 274 aa1.64□□□□□ -2.15
RIF1-212ENST00000498041 DNTTIP1Q9H147 329 aa1.64□□□□□ -2.15
RIF1-212ENST00000498041 ARV1Q9H2C2 271 aa1.64□□□□□ -2.15
RIF1-212ENST00000498041 RAB18Q9NP72 206 aa1.64□□□□□ -2.15
RIF1-212ENST00000498041 RPRMQ9NS64 109 aa1.64□□□□□ -2.15
RIF1-212ENST00000498041 KCNIP1Q9NZI2 227 aa1.64□□□□□ -2.15
RIF1-212ENST00000498041 NUP50Q9UKX7 468 aa1.64□□□□□ -2.15
RIF1-212ENST00000498041 OR51B2Q9Y5P1 312 aa1.64□□□□□ -2.15
RIF1-212ENST00000498041 INSIG2Q9Y5U4 225 aa1.64□□□□□ -2.15
RIF1-212ENST00000498041 SPTA1P02549 2419 aa1.64□□□□□ -2.15
RIF1-212ENST00000498041 LAMA5O15230 3695 aa1.63□□□□□ -2.15
RIF1-212ENST00000498041 CSMD1Q96PZ7 3565 aa1.63□□□□□ -2.15
RIF1-212ENST00000498041 IGKV3-7A0A075B6H7 116 aa1.63□□□□□ -2.15
RIF1-212ENST00000498041 IGLV11-55A0A075B6I3 123 aa1.63□□□□□ -2.15
RIF1-212ENST00000498041 TRGV10A0A0A0MS01 117 aa1.63□□□□□ -2.15
RIF1-212ENST00000498041 MUC21A0A0G2JKD1 596 aa1.63□□□□□ -2.15
RIF1-212ENST00000498041 MUC21A0A140T8X8 626 aa1.63□□□□□ -2.15
RIF1-212ENST00000498041 hADV38S2A0JD32 116 aa1.63□□□□□ -2.15
RIF1-212ENST00000498041 IGLC7A0M8Q6 106 aa1.63□□□□□ -2.15
RIF1-212ENST00000498041 SMCO3A2RU48 225 aa1.63□□□□□ -2.15
RIF1-212ENST00000498041 LINC00862A6NCI5 91 aa1.63□□□□□ -2.15
RIF1-212ENST00000498041 RBMY1BA6NDE4 496 aaKnown RBP1.63□□□□□ -2.15
RIF1-212ENST00000498041 RBMY1EA6NEQ0 496 aaKnown RBP1.63□□□□□ -2.15
RIF1-212ENST00000498041 HMSDA8MTL9 139 aa1.63□□□□□ -2.15
RIF1-212ENST00000498041 ZNF705FA8MVS1 300 aaPredicted RBP1.63□□□□□ -2.15
RIF1-212ENST00000498041 ODF3BA8MYP8 253 aa1.63□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms