RNA–Protein interactions for RNA: ENST00000497993.5

TMEM39A-212, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 590 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-212ENST00000497993 ISOC1Q96CN7 298 aa4.32□□□□□ -1.72
TMEM39A-212ENST00000497993 OR2A7Q96R45 310 aa4.32□□□□□ -1.72
TMEM39A-212ENST00000497993 FXYD6Q9H0Q3 95 aa4.32□□□□□ -1.72
TMEM39A-212ENST00000497993 PYGO1Q9Y3Y4 419 aa4.32□□□□□ -1.72
TMEM39A-212ENST00000497993 RBM7Q9Y580 266 aaKnown RBP4.32□□□□□ -1.72
TMEM39A-212ENST00000497993 WSB1Q9Y6I7 421 aa4.32□□□□□ -1.72
TMEM39A-212ENST00000497993 SMIM31A0A1B0GVY4 71 aa4.31□□□□□ -1.72
TMEM39A-212ENST00000497993 IGLC7A0M8Q6 106 aa4.31□□□□□ -1.72
TMEM39A-212ENST00000497993 A8MWP6 167 aa4.31□□□□□ -1.72
TMEM39A-212ENST00000497993 E7EUB6 86 aa4.31□□□□□ -1.72
TMEM39A-212ENST00000497993 GABARAPH6UMI1 98 aa4.31□□□□□ -1.72
TMEM39A-212ENST00000497993 GPR31O00270 319 aa4.31□□□□□ -1.72
TMEM39A-212ENST00000497993 GSTZ1O43708 216 aaPredicted RBP4.31□□□□□ -1.72
TMEM39A-212ENST00000497993 FABP1P07148 127 aa4.31□□□□□ -1.72
TMEM39A-212ENST00000497993 OR4E1P0C645 316 aa4.31□□□□□ -1.72
TMEM39A-212ENST00000497993 LINC01547P58512 204 aaPredicted RBP4.31□□□□□ -1.72
TMEM39A-212ENST00000497993 ZNF45Q02386 682 aa4.31□□□□□ -1.72
TMEM39A-212ENST00000497993 ZNF266Q14584 549 aa4.31□□□□□ -1.72
TMEM39A-212ENST00000497993 PLGLAQ15195 96 aa4.31□□□□□ -1.72
TMEM39A-212ENST00000497993 SURF2Q15527 256 aaPredicted RBP4.31□□□□□ -1.72
TMEM39A-212ENST00000497993 DEFB136Q30KP8 78 aa4.31□□□□□ -1.72
TMEM39A-212ENST00000497993 OR2B11Q5JQS5 317 aa4.31□□□□□ -1.72
TMEM39A-212ENST00000497993 LPCAT3Q6P1A2 487 aa4.31□□□□□ -1.72
TMEM39A-212ENST00000497993 REG3GQ6UW15 175 aa4.31□□□□□ -1.72
TMEM39A-212ENST00000497993 OR5H2Q8NGV7 314 aa4.31□□□□□ -1.72
TMEM39A-212ENST00000497993 SMIM4Q8WVI0 70 aa4.31□□□□□ -1.72
TMEM39A-212ENST00000497993 FAM103A1Q9BTL3 118 aaKnown RBP4.31□□□□□ -1.72
TMEM39A-212ENST00000497993 TMEM208Q9BTX3 173 aa4.31□□□□□ -1.72
TMEM39A-212ENST00000497993 CCL28Q9NRJ3 127 aa4.31□□□□□ -1.72
TMEM39A-212ENST00000497993 NBEAL2Q6ZNJ1 2754 aa4.3□□□□□ -1.72
TMEM39A-212ENST00000497993 IGLV11-55A0A075B6I3 123 aa4.3□□□□□ -1.72
TMEM39A-212ENST00000497993 WI2-2373I1.2A0A1W2PRP0 233 aa4.3□□□□□ -1.72
TMEM39A-212ENST00000497993 H7C1H1 209 aa4.3□□□□□ -1.72
TMEM39A-212ENST00000497993 LGALS9O00182 355 aa4.3□□□□□ -1.72
TMEM39A-212ENST00000497993 UPK2O00526 184 aa4.3□□□□□ -1.72
TMEM39A-212ENST00000497993 OVOL1O14753 267 aa4.3□□□□□ -1.72
TMEM39A-212ENST00000497993 TCAPO15273 167 aa4.3□□□□□ -1.72
TMEM39A-212ENST00000497993 PGLYRP1O75594 196 aaPredicted RBP4.3□□□□□ -1.72
TMEM39A-212ENST00000497993 IGLV1-51P01701 117 aa4.3□□□□□ -1.72
TMEM39A-212ENST00000497993 TRGV3P03979 118 aa4.3□□□□□ -1.72
TMEM39A-212ENST00000497993 TYMSP04818 313 aa4.3□□□□□ -1.72
TMEM39A-212ENST00000497993 HIST1H1BP16401 226 aaKnown RBP4.3□□□□□ -1.72
TMEM39A-212ENST00000497993 ETV6P41212 452 aa4.3□□□□□ -1.72
TMEM39A-212ENST00000497993 RPL27AP46776 148 aaKnown RBP4.3□□□□□ -1.72
TMEM39A-212ENST00000497993 TPPP2P59282 170 aa4.3□□□□□ -1.72
TMEM39A-212ENST00000497993 IL34Q6ZMJ4 242 aa4.3□□□□□ -1.72
TMEM39A-212ENST00000497993 NOTCH2NLQ7Z3S9 236 aa4.3□□□□□ -1.72
TMEM39A-212ENST00000497993 ZNF680Q8NEM1 530 aa4.3□□□□□ -1.72
TMEM39A-212ENST00000497993 OR2K2Q8NGT1 345 aa4.3□□□□□ -1.72
TMEM39A-212ENST00000497993 GRPEL2Q8TAA5 225 aa4.3□□□□□ -1.72
TMEM39A-212ENST00000497993 STOML3Q8TAV4 291 aa4.3□□□□□ -1.72
TMEM39A-212ENST00000497993 DCUN1D4Q92564 292 aa4.3□□□□□ -1.72
TMEM39A-212ENST00000497993 DGCR14Q96DF8 476 aaKnown RBP4.3□□□□□ -1.72
TMEM39A-212ENST00000497993 ZNF414Q96IQ9 312 aa4.3□□□□□ -1.72
TMEM39A-212ENST00000497993 B9D2Q9BPU9 175 aa4.3□□□□□ -1.72
TMEM39A-212ENST00000497993 ZNF2Q9BSG1 426 aaPredicted RBP4.3□□□□□ -1.72
TMEM39A-212ENST00000497993 TMEM14BQ9NUH8 114 aa4.3□□□□□ -1.72
TMEM39A-212ENST00000497993 TAS2R8Q9NYW2 309 aa4.3□□□□□ -1.72
TMEM39A-212ENST00000497993 COMMD3Q9UBI1 195 aa4.3□□□□□ -1.72
TMEM39A-212ENST00000497993 AGRNO00468 2067 aa4.3□□□□□ -1.72
TMEM39A-212ENST00000497993 TINCRA0A1B0GVN0 87 aa4.29□□□□□ -1.72
TMEM39A-212ENST00000497993 S1PR2O95136 353 aa4.29□□□□□ -1.72
TMEM39A-212ENST00000497993 CNIH1O95406 144 aa4.29□□□□□ -1.72
TMEM39A-212ENST00000497993 IGKV1-39P01597 117 aa4.29□□□□□ -1.72
TMEM39A-212ENST00000497993 IGKV1D-39P04432 117 aa4.29□□□□□ -1.72
TMEM39A-212ENST00000497993 G0S2P27469 103 aa4.29□□□□□ -1.72
TMEM39A-212ENST00000497993 TAS2R19P59542 299 aa4.29□□□□□ -1.72
TMEM39A-212ENST00000497993 C10orf55Q5SWW7 151 aa4.29□□□□□ -1.72
TMEM39A-212ENST00000497993 C2orf66Q6UXQ4 117 aa4.29□□□□□ -1.72
TMEM39A-212ENST00000497993 IDO2Q6ZQW0 420 aa4.29□□□□□ -1.72
TMEM39A-212ENST00000497993 Q6ZVH6 145 aa4.29□□□□□ -1.72
TMEM39A-212ENST00000497993 CLVS1Q8IUQ0 354 aaPredicted RBP4.29□□□□□ -1.72
TMEM39A-212ENST00000497993 TMEM229BQ8NBD8 167 aa4.29□□□□□ -1.72
TMEM39A-212ENST00000497993 OR10J6PQ8NGY7 276 aa4.29□□□□□ -1.72
TMEM39A-212ENST00000497993 DTD1Q8TEA8 209 aa4.29□□□□□ -1.72
TMEM39A-212ENST00000497993 IL22RA2Q969J5 263 aa4.29□□□□□ -1.72
TMEM39A-212ENST00000497993 DUX3Q96PT4 197 aa4.29□□□□□ -1.72
TMEM39A-212ENST00000497993 TSC22D3Q99576 134 aa4.29□□□□□ -1.72
TMEM39A-212ENST00000497993 NDUFA4L2Q9NRX3 87 aa4.29□□□□□ -1.72
TMEM39A-212ENST00000497993 V9GYH0 126 aa4.29□□□□□ -1.72
TMEM39A-212ENST00000497993 TRBV7-1A0A0A6YYK4 115 aa4.28□□□□□ -1.72
TMEM39A-212ENST00000497993 IGHV3OR16-9A0A0B4J2B5 98 aa4.28□□□□□ -1.72
TMEM39A-212ENST00000497993 MEIS3P1A6NDR6 274 aa4.28□□□□□ -1.72
TMEM39A-212ENST00000497993 BMPR1BO00238 502 aa4.28□□□□□ -1.72
TMEM39A-212ENST00000497993 DHFRP00374 187 aa4.28□□□□□ -1.72
TMEM39A-212ENST00000497993 PMP2P02689 132 aa4.28□□□□□ -1.72
TMEM39A-212ENST00000497993 CD3DP04234 171 aa4.28□□□□□ -1.72
TMEM39A-212ENST00000497993 S100GP29377 79 aa4.28□□□□□ -1.72
TMEM39A-212ENST00000497993 FXYD4P59646 89 aa4.28□□□□□ -1.72
TMEM39A-212ENST00000497993 RHOGP84095 191 aa4.28□□□□□ -1.72
TMEM39A-212ENST00000497993 ZNF79Q15937 498 aa4.28□□□□□ -1.72
TMEM39A-212ENST00000497993 PRR4Q16378 134 aa4.28□□□□□ -1.72
TMEM39A-212ENST00000497993 ZNF876PQ49A33 203 aa4.28□□□□□ -1.72
TMEM39A-212ENST00000497993 RNASE10Q5GAN6 216 aaKnown RBP4.28□□□□□ -1.72
TMEM39A-212ENST00000497993 TEX43Q6ZNM6 134 aa4.28□□□□□ -1.72
TMEM39A-212ENST00000497993 FAM19A5Q7Z5A7 132 aaPredicted RBP4.28□□□□□ -1.72
TMEM39A-212ENST00000497993 GPHB5Q86YW7 130 aa4.28□□□□□ -1.72
TMEM39A-212ENST00000497993 SNX29P2Q8IUI4 249 aa4.28□□□□□ -1.72
TMEM39A-212ENST00000497993 TMEM252Q8N6L7 170 aa4.28□□□□□ -1.72
TMEM39A-212ENST00000497993 GDPD1Q8N9F7 314 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms