RNA–Protein interactions for RNA: ENST00000497580.5

GAPVD1-220, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 3,720 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-220ENST00000497580 SPRNQ5BIV9 151 aa10.45□□□□□ -0.74
GAPVD1-220ENST00000497580 TMEM160Q9NX00 188 aa10.45□□□□□ -0.74
GAPVD1-220ENST00000497580 DSCAML1Q8TD84 2053 aa10.45□□□□□ -0.74
GAPVD1-220ENST00000497580 SLC25A48Q6ZT89 311 aaKnown RBP10.45□□□□□ -0.74
GAPVD1-220ENST00000497580 MRPL20Q9BYC9 149 aaKnown RBP10.45□□□□□ -0.74
GAPVD1-220ENST00000497580 GFRA4Q9GZZ7 299 aa10.45□□□□□ -0.74
GAPVD1-220ENST00000497580 ZNF492Q9P255 531 aa10.45□□□□□ -0.74
GAPVD1-220ENST00000497580 IGLL5B9A064 214 aa10.44□□□□□ -0.74
GAPVD1-220ENST00000497580 NDUFS7O75251 213 aa10.44□□□□□ -0.74
GAPVD1-220ENST00000497580 IGHV1-2P23083 117 aa10.44□□□□□ -0.74
GAPVD1-220ENST00000497580 FAM222BQ8WU58 562 aa10.44□□□□□ -0.74
GAPVD1-220ENST00000497580 CACNG8Q8WXS5 425 aa10.44□□□□□ -0.74
GAPVD1-220ENST00000497580 TMEM189A5PLL7 270 aa10.44□□□□□ -0.74
GAPVD1-220ENST00000497580 F8W1H4 67 aa10.44□□□□□ -0.74
GAPVD1-220ENST00000497580 ORMDL3Q8N138 153 aa10.44□□□□□ -0.74
GAPVD1-220ENST00000497580 HIST1H4GQ99525 98 aa10.44□□□□□ -0.74
GAPVD1-220ENST00000497580 FOXC2Q99958 501 aa10.44□□□□□ -0.74
GAPVD1-220ENST00000497580 TRBV25-1A0A075B6N4 114 aa10.44□□□□□ -0.74
GAPVD1-220ENST00000497580 IGKV1D-37A0A075B6S9 117 aa10.44□□□□□ -0.74
GAPVD1-220ENST00000497580 LAMTOR5O43504 91 aa10.44□□□□□ -0.74
GAPVD1-220ENST00000497580 MT-ATP8P03928 68 aa10.44□□□□□ -0.74
GAPVD1-220ENST00000497580 C17orf58Q2M2W7 97 aa10.44□□□□□ -0.74
GAPVD1-220ENST00000497580 ZNF418Q8TF45 676 aaPredicted RBP10.44□□□□□ -0.74
GAPVD1-220ENST00000497580 GLMPQ8WWB7 406 aa10.44□□□□□ -0.74
GAPVD1-220ENST00000497580 SPATA25Q9BR10 227 aa10.44□□□□□ -0.74
GAPVD1-220ENST00000497580 KLF12Q9Y4X4 402 aa10.44□□□□□ -0.74
GAPVD1-220ENST00000497580 IGHV3-72A0A0B4J1Y9 119 aa10.43□□□□□ -0.74
GAPVD1-220ENST00000497580 SIVA1O15304 175 aa10.43□□□□□ -0.74
GAPVD1-220ENST00000497580 ENSAO43768 121 aaKnown RBP10.43□□□□□ -0.74
GAPVD1-220ENST00000497580 TGFAP01135 160 aa10.43□□□□□ -0.74
GAPVD1-220ENST00000497580 MYCNOSP40205 109 aa10.43□□□□□ -0.74
GAPVD1-220ENST00000497580 ZC2HC1BQ5TFG8 222 aa10.43□□□□□ -0.74
GAPVD1-220ENST00000497580 FOXI2Q6ZQN5 318 aa10.43□□□□□ -0.74
GAPVD1-220ENST00000497580 ZGRF1Q86YA3 2104 aa10.43□□□□□ -0.74
GAPVD1-220ENST00000497580 MRPL16Q9NX20 251 aaKnown RBP10.43□□□□□ -0.74
GAPVD1-220ENST00000497580 NPYP01303 97 aa10.43□□□□□ -0.74
GAPVD1-220ENST00000497580 ANXA2RQ3ZCQ2 193 aa10.43□□□□□ -0.74
GAPVD1-220ENST00000497580 LYZL1Q6UWQ5 148 aa10.43□□□□□ -0.74
GAPVD1-220ENST00000497580 RNF183Q96D59 192 aa10.43□□□□□ -0.74
GAPVD1-220ENST00000497580 CT45A10P0DMU9 189 aa10.43□□□□□ -0.74
GAPVD1-220ENST00000497580 EVI2AP22794 236 aa10.43□□□□□ -0.74
GAPVD1-220ENST00000497580 SUB1P53999 127 aaKnown RBP eCLIP10.43□□□□□ -0.74
GAPVD1-220ENST00000497580 GCSAMQ8N6F7 178 aa10.43□□□□□ -0.74
GAPVD1-220ENST00000497580 TMEM178AQ8NBL3 297 aa10.43□□□□□ -0.74
GAPVD1-220ENST00000497580 CR1LQ2VPA4 569 aa10.42□□□□□ -0.74
GAPVD1-220ENST00000497580 CCL13Q99616 98 aa10.42□□□□□ -0.74
GAPVD1-220ENST00000497580 DMXL1Q9Y485 3027 aa10.42□□□□□ -0.74
GAPVD1-220ENST00000497580 RALYQ9UKM9 306 aaKnown RBP10.42□□□□□ -0.74
GAPVD1-220ENST00000497580 M0R3E3 92 aa10.42□□□□□ -0.74
GAPVD1-220ENST00000497580 TWIST1Q15672 202 aa10.42□□□□□ -0.74
GAPVD1-220ENST00000497580 CEND1Q8N111 149 aa10.42□□□□□ -0.74
GAPVD1-220ENST00000497580 DPF1Q92782 380 aa10.42□□□□□ -0.74
GAPVD1-220ENST00000497580 C17orf77Q96MU5 243 aa10.42□□□□□ -0.74
GAPVD1-220ENST00000497580 PRRG2O14669 202 aa10.41□□□□□ -0.74
GAPVD1-220ENST00000497580 TNFRSF1AP19438 455 aa10.41□□□□□ -0.74
GAPVD1-220ENST00000497580 LEPP41159 167 aa10.41□□□□□ -0.74
GAPVD1-220ENST00000497580 TMEM164Q5U3C3 297 aa10.41□□□□□ -0.74
GAPVD1-220ENST00000497580 MBNL2Q5VZF2 373 aaKnown RBP10.41□□□□□ -0.74
GAPVD1-220ENST00000497580 PMS2CLQ68D20 193 aa10.41□□□□□ -0.74
GAPVD1-220ENST00000497580 C8orf86Q6ZUL3 223 aa10.41□□□□□ -0.74
GAPVD1-220ENST00000497580 FAM216BQ8N7L0 139 aa10.41□□□□□ -0.74
GAPVD1-220ENST00000497580 LOC107984156A0A0G2JMH3 177 aa10.41□□□□□ -0.74
GAPVD1-220ENST00000497580 C16orf97H3BN30 126 aa10.41□□□□□ -0.74
GAPVD1-220ENST00000497580 TCTEX1D4Q5JR98 221 aa10.41□□□□□ -0.74
GAPVD1-220ENST00000497580 ARL17AQ8IVW1 177 aa10.41□□□□□ -0.74
GAPVD1-220ENST00000497580 C8orf49Q96NF6 230 aa10.41□□□□□ -0.74
GAPVD1-220ENST00000497580 RPUSD1Q9UJJ7 312 aaKnown RBP10.41□□□□□ -0.74
GAPVD1-220ENST00000497580 RBP4P02753 201 aa10.41□□□□□ -0.74
GAPVD1-220ENST00000497580 FER1L6-AS2Q96M78 137 aa10.41□□□□□ -0.74
GAPVD1-220ENST00000497580 TPSG1Q9NRR2 321 aa10.41□□□□□ -0.74
GAPVD1-220ENST00000497580 NDUFA4L2Q9NRX3 87 aa10.41□□□□□ -0.74
GAPVD1-220ENST00000497580 CECR9P0C854 216 aa10.4□□□□□ -0.74
GAPVD1-220ENST00000497580 CCL11P51671 97 aa10.4□□□□□ -0.74
GAPVD1-220ENST00000497580 MRPL51Q4U2R6 128 aaKnown RBP10.4□□□□□ -0.74
GAPVD1-220ENST00000497580 PTH2Q96A98 100 aa10.4□□□□□ -0.74
GAPVD1-220ENST00000497580 CEP192Q8TEP8 1941 aa10.4□□□□□ -0.74
GAPVD1-220ENST00000497580 C12orf74Q32Q52 190 aa10.4□□□□□ -0.74
GAPVD1-220ENST00000497580 OSR1Q8TAX0 266 aaPredicted RBP10.4□□□□□ -0.74
GAPVD1-220ENST00000497580 ANAPC13Q9BS18 74 aa10.4□□□□□ -0.74
GAPVD1-220ENST00000497580 SRRM5B3KS81 715 aa10.4□□□□□ -0.75
GAPVD1-220ENST00000497580 E9PLD3 99 aa10.4□□□□□ -0.75
GAPVD1-220ENST00000497580 HIGD1AQ9Y241 93 aa10.4□□□□□ -0.75
GAPVD1-220ENST00000497580 TRGV5A0A0B4J1U4 118 aa10.39□□□□□ -0.75
GAPVD1-220ENST00000497580 FSTL3O95633 263 aa10.39□□□□□ -0.75
GAPVD1-220ENST00000497580 GP9P14770 177 aa10.39□□□□□ -0.75
GAPVD1-220ENST00000497580 PRB3Q04118 309 aaPredicted RBP10.39□□□□□ -0.75
GAPVD1-220ENST00000497580 DIAPH2-AS1Q14236 149 aa10.39□□□□□ -0.75
GAPVD1-220ENST00000497580 CYSLTR1Q9Y271 337 aa10.39□□□□□ -0.75
GAPVD1-220ENST00000497580 TRAV40A0A0B4J280 105 aa10.39□□□□□ -0.75
GAPVD1-220ENST00000497580 B5MCH6 92 aa10.39□□□□□ -0.75
GAPVD1-220ENST00000497580 IGKCP01834 107 aa10.39□□□□□ -0.75
GAPVD1-220ENST00000497580 ARRDC1-AS1Q9H2J1 176 aa10.39□□□□□ -0.75
GAPVD1-220ENST00000497580 PSG8Q9UQ74 426 aa10.39□□□□□ -0.75
GAPVD1-220ENST00000497580 NPIPB5A8MRT5 1133 aa10.38□□□□□ -0.75
GAPVD1-220ENST00000497580 FAM104BQ5XKR9 115 aa10.38□□□□□ -0.75
GAPVD1-220ENST00000497580 TTC9CQ8N5M4 171 aa10.38□□□□□ -0.75
GAPVD1-220ENST00000497580 PHLDA1Q8WV24 401 aaPredicted RBP10.38□□□□□ -0.75
GAPVD1-220ENST00000497580 H3BVH4 76 aa10.38□□□□□ -0.75
GAPVD1-220ENST00000497580 TMEM8BA6NDV4 472 aa10.38□□□□□ -0.75
GAPVD1-220ENST00000497580 NDUFA3O95167 84 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms