RNA–Protein interactions for RNA: ENST00000497345.1

CMSS1-209, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 3

Gene CMSS1, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-209ENST00000497345 ASCL2Q99929 193 aa3.65□□□□□ -1.83
CMSS1-209ENST00000497345 SHANK2-AS3Q9BTD1 123 aa3.65□□□□□ -1.83
CMSS1-209ENST00000497345 SERTAD4Q9NUC0 356 aa3.65□□□□□ -1.83
CMSS1-209ENST00000497345 MED9Q9NWA0 146 aa3.65□□□□□ -1.83
CMSS1-209ENST00000497345 PEF1Q9UBV8 284 aaKnown RBP3.65□□□□□ -1.83
CMSS1-209ENST00000497345 VAX2Q9UIW0 290 aa3.65□□□□□ -1.83
CMSS1-209ENST00000497345 HIVEP2P31629 2446 aa3.64□□□□□ -1.83
CMSS1-209ENST00000497345 CSMD1Q96PZ7 3565 aa3.64□□□□□ -1.83
CMSS1-209ENST00000497345 MTORP42345 2549 aa3.64□□□□□ -1.83
CMSS1-209ENST00000497345 IGHV4OR15-8A0A075B7B6 117 aa3.64□□□□□ -1.83
CMSS1-209ENST00000497345 A0A087WW49 117 aa3.64□□□□□ -1.83
CMSS1-209ENST00000497345 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP3.64□□□□□ -1.83
CMSS1-209ENST00000497345 TRAV1-1A0A0B4J248 108 aa3.64□□□□□ -1.83
CMSS1-209ENST00000497345 A0A0G2JLM5 398 aa3.64□□□□□ -1.83
CMSS1-209ENST00000497345 ZNF98A6NK75 572 aa3.64□□□□□ -1.83
CMSS1-209ENST00000497345 FAM74A7A6NL05 159 aa3.64□□□□□ -1.83
CMSS1-209ENST00000497345 H3BQ15 152 aa3.64□□□□□ -1.83
CMSS1-209ENST00000497345 H3BRN7 92 aa3.64□□□□□ -1.83
CMSS1-209ENST00000497345 H3BUA1 57 aa3.64□□□□□ -1.83
CMSS1-209ENST00000497345 BMPR1BO00238 502 aa3.64□□□□□ -1.83
CMSS1-209ENST00000497345 TSPAN4O14817 238 aa3.64□□□□□ -1.83
CMSS1-209ENST00000497345 TCF21O43680 179 aa3.64□□□□□ -1.83
CMSS1-209ENST00000497345 CRLF1O75462 422 aa3.64□□□□□ -1.83
CMSS1-209ENST00000497345 CD5P06127 495 aa3.64□□□□□ -1.83
CMSS1-209ENST00000497345 ADCYAP1P18509 176 aa3.64□□□□□ -1.83
CMSS1-209ENST00000497345 MALP21145 153 aa3.64□□□□□ -1.83
CMSS1-209ENST00000497345 ZP3P21754 424 aa3.64□□□□□ -1.83
CMSS1-209ENST00000497345 PSMB8P28062 276 aa3.64□□□□□ -1.83
CMSS1-209ENST00000497345 TFPI2P48307 235 aa3.64□□□□□ -1.83
CMSS1-209ENST00000497345 HILS1P60008 231 aa3.64□□□□□ -1.83
CMSS1-209ENST00000497345 CD81P60033 236 aa3.64□□□□□ -1.83
CMSS1-209ENST00000497345 MEF2BQ02080 365 aaPredicted RBP3.64□□□□□ -1.83
CMSS1-209ENST00000497345 RELQ04864 619 aaPredicted RBP3.64□□□□□ -1.83
CMSS1-209ENST00000497345 GUCA2BQ16661 112 aa3.64□□□□□ -1.83
CMSS1-209ENST00000497345 RPEL1Q2QD12 228 aa3.64□□□□□ -1.83
CMSS1-209ENST00000497345 NSUN5P1Q3KNT7 163 aa3.64□□□□□ -1.83
CMSS1-209ENST00000497345 TCTEX1D4Q5JR98 221 aa3.64□□□□□ -1.83
CMSS1-209ENST00000497345 SOHLH1Q5JUK2 328 aa3.64□□□□□ -1.83
CMSS1-209ENST00000497345 ATRAIDQ6UW56 229 aa3.64□□□□□ -1.83
CMSS1-209ENST00000497345 UQCC3Q6UW78 93 aa3.64□□□□□ -1.83
CMSS1-209ENST00000497345 OR8I2Q8N0Y5 310 aa3.64□□□□□ -1.83
CMSS1-209ENST00000497345 EXOC3-AS1Q8N2X6 119 aa3.64□□□□□ -1.83
CMSS1-209ENST00000497345 KLHL30-AS1Q8NEE0 82 aa3.64□□□□□ -1.83
CMSS1-209ENST00000497345 LYPD6BQ8NI32 183 aa3.64□□□□□ -1.83
CMSS1-209ENST00000497345 FXYD5Q96DB9 178 aa3.64□□□□□ -1.83
CMSS1-209ENST00000497345 METTL26Q96S19 204 aa3.64□□□□□ -1.83
CMSS1-209ENST00000497345 MRPL32Q9BYC8 188 aaKnown RBP3.64□□□□□ -1.83
CMSS1-209ENST00000497345 SLC35B3Q9H1N7 401 aa3.64□□□□□ -1.83
CMSS1-209ENST00000497345 MANBALQ9NQG1 85 aa3.64□□□□□ -1.83
CMSS1-209ENST00000497345 TMEM160Q9NX00 188 aa3.64□□□□□ -1.83
CMSS1-209ENST00000497345 GAR1Q9NY12 217 aaKnown RBP3.64□□□□□ -1.83
CMSS1-209ENST00000497345 MRPL27Q9P0M9 148 aaKnown RBP3.64□□□□□ -1.83
CMSS1-209ENST00000497345 TRAV34A0A0B4J273 112 aa3.63□□□□□ -1.83
CMSS1-209ENST00000497345 PGPA6NDG6 321 aa3.63□□□□□ -1.83
CMSS1-209ENST00000497345 PGPEP1LA6NFU8 196 aa3.63□□□□□ -1.83
CMSS1-209ENST00000497345 PRSS29PA6NIE9 313 aa3.63□□□□□ -1.83
CMSS1-209ENST00000497345 ZNF727A8MUV8 499 aa3.63□□□□□ -1.83
CMSS1-209ENST00000497345 KRBOX1C9JBD0 128 aa3.63□□□□□ -1.83
CMSS1-209ENST00000497345 GGCTO75223 188 aaKnown RBP3.63□□□□□ -1.83
CMSS1-209ENST00000497345 NDUFB4O95168 129 aa3.63□□□□□ -1.83
CMSS1-209ENST00000497345 SLC25A5P05141 298 aaKnown RBP3.63□□□□□ -1.83
CMSS1-209ENST00000497345 NBEAP1P0C6P0 100 aa3.63□□□□□ -1.83
CMSS1-209ENST00000497345 NPPCP23582 126 aa3.63□□□□□ -1.83
CMSS1-209ENST00000497345 CRYBB3P26998 211 aa3.63□□□□□ -1.83
CMSS1-209ENST00000497345 HLA-DMBP28068 263 aa3.63□□□□□ -1.83
CMSS1-209ENST00000497345 SYNJ2BPP57105 145 aa3.63□□□□□ -1.83
CMSS1-209ENST00000497345 ZNF343Q6P1L6 599 aa3.63□□□□□ -1.83
CMSS1-209ENST00000497345 PQLC2Q6ZP29 291 aa3.63□□□□□ -1.83
CMSS1-209ENST00000497345 BPIFA4PQ86YQ2 179 aa3.63□□□□□ -1.83
CMSS1-209ENST00000497345 Q8N2B8 174 aa3.63□□□□□ -1.83
CMSS1-209ENST00000497345 GBGT1Q8N5D6 347 aa3.63□□□□□ -1.83
CMSS1-209ENST00000497345 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.63□□□□□ -1.83
CMSS1-209ENST00000497345 NHLRC2Q8NBF2 726 aa3.63□□□□□ -1.83
CMSS1-209ENST00000497345 OR11H1Q8NG94 326 aa3.63□□□□□ -1.83
CMSS1-209ENST00000497345 OR4F17Q8NGA8 305 aa3.63□□□□□ -1.83
CMSS1-209ENST00000497345 OR1N2Q8NGR9 330 aa3.63□□□□□ -1.83
CMSS1-209ENST00000497345 LINC01006Q8NI28 216 aa3.63□□□□□ -1.83
CMSS1-209ENST00000497345 ZNF414Q96IQ9 312 aa3.63□□□□□ -1.83
CMSS1-209ENST00000497345 LINC00479Q96M42 142 aa3.63□□□□□ -1.83
CMSS1-209ENST00000497345 CITED2Q99967 270 aaPredicted RBP3.63□□□□□ -1.83
CMSS1-209ENST00000497345 DERL1Q9BUN8 251 aa3.63□□□□□ -1.83
CMSS1-209ENST00000497345 C19orf24Q9BVV8 132 aa3.63□□□□□ -1.83
CMSS1-209ENST00000497345 TMEM167BQ9NRX6 74 aa3.63□□□□□ -1.83
CMSS1-209ENST00000497345 ZNF586Q9NXT0 402 aa3.63□□□□□ -1.83
CMSS1-209ENST00000497345 SMAD5-AS1Q9Y6J3 95 aa3.63□□□□□ -1.83
CMSS1-209ENST00000497345 VPS13CQ709C8 3753 aa3.62□□□□□ -1.83
CMSS1-209ENST00000497345 CLPSL1A2RUU4 121 aa3.62□□□□□ -1.83
CMSS1-209ENST00000497345 ZNF705FA8MVS1 300 aaPredicted RBP3.62□□□□□ -1.83
CMSS1-209ENST00000497345 GGTLC3B5MD39 225 aa3.62□□□□□ -1.83
CMSS1-209ENST00000497345 CLDN34H7C241 214 aa3.62□□□□□ -1.83
CMSS1-209ENST00000497345 SLC17A3O00476 420 aa3.62□□□□□ -1.83
CMSS1-209ENST00000497345 NDUFA4O00483 81 aa3.62□□□□□ -1.83
CMSS1-209ENST00000497345 LGALS1P09382 135 aaKnown RBP3.62□□□□□ -1.83
CMSS1-209ENST00000497345 HIST1H1EP10412 219 aaKnown RBP3.62□□□□□ -1.83
CMSS1-209ENST00000497345 MGST1P10620 155 aaKnown RBP3.62□□□□□ -1.83
CMSS1-209ENST00000497345 GP9P14770 177 aa3.62□□□□□ -1.83
CMSS1-209ENST00000497345 HOXD3P31249 432 aaPredicted RBP3.62□□□□□ -1.83
CMSS1-209ENST00000497345 PLP1P60201 277 aa3.62□□□□□ -1.83
CMSS1-209ENST00000497345 ADIRFQ15847 76 aa3.62□□□□□ -1.83
CMSS1-209ENST00000497345 FAM106AQ4KMX7 169 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms