RNA–Protein interactions for RNA: ENST00000496910.1

EXOSC3-208, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 217 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-208ENST00000496910 ZNF586Q9NXT0 402 aa2.42□□□□□ -2.02
EXOSC3-208ENST00000496910 C21orf62Q9NYP8 219 aa2.42□□□□□ -2.02
EXOSC3-208ENST00000496910 TVP23BQ9NYZ1 205 aa2.42□□□□□ -2.02
EXOSC3-208ENST00000496910 TRAPPC2LQ9UL33 140 aa2.42□□□□□ -2.02
EXOSC3-208ENST00000496910 DSCAMO60469 2012 aa2.42□□□□□ -2.02
EXOSC3-208ENST00000496910 DNAH10Q8IVF4 4471 aa2.42□□□□□ -2.02
EXOSC3-208ENST00000496910 TRAV9-1A0A075B6T8 112 aa2.41□□□□□ -2.02
EXOSC3-208ENST00000496910 BORCS7-ASMTA0A0B4J1R7 106 aa2.41□□□□□ -2.02
EXOSC3-208ENST00000496910 TMEM269A0A1B0GVZ9 245 aa2.41□□□□□ -2.02
EXOSC3-208ENST00000496910 C9JCJ5 164 aa2.41□□□□□ -2.02
EXOSC3-208ENST00000496910 BCL2L11O43521 198 aa2.41□□□□□ -2.02
EXOSC3-208ENST00000496910 HLA-DQA1P01909 254 aa2.41□□□□□ -2.02
EXOSC3-208ENST00000496910 CD7P09564 240 aa2.41□□□□□ -2.02
EXOSC3-208ENST00000496910 OR5AC1P0C628 307 aa2.41□□□□□ -2.02
EXOSC3-208ENST00000496910 CD200P41217 278 aa2.41□□□□□ -2.02
EXOSC3-208ENST00000496910 LPAR6P43657 344 aa2.41□□□□□ -2.02
EXOSC3-208ENST00000496910 HIGD2BQ4VC39 106 aa2.41□□□□□ -2.02
EXOSC3-208ENST00000496910 SPINK14Q6IE38 97 aa2.41□□□□□ -2.02
EXOSC3-208ENST00000496910 PRSS54Q6PEW0 395 aa2.41□□□□□ -2.02
EXOSC3-208ENST00000496910 ZNF101Q8IZC7 436 aa2.41□□□□□ -2.02
EXOSC3-208ENST00000496910 FER1L6-AS1Q8NA97 138 aa2.41□□□□□ -2.02
EXOSC3-208ENST00000496910 ZFP62Q8NB50 900 aaPredicted RBP2.41□□□□□ -2.02
EXOSC3-208ENST00000496910 OR11G2Q8NGC1 345 aa2.41□□□□□ -2.02
EXOSC3-208ENST00000496910 OR10G2Q8NGC3 310 aa2.41□□□□□ -2.02
EXOSC3-208ENST00000496910 OR4K13Q8NH42 304 aa2.41□□□□□ -2.02
EXOSC3-208ENST00000496910 TOMM6Q96B49 74 aa2.41□□□□□ -2.02
EXOSC3-208ENST00000496910 ZC2HC1AQ96GY0 325 aa2.41□□□□□ -2.02
EXOSC3-208ENST00000496910 SPIN2AQ99865 258 aa2.41□□□□□ -2.02
EXOSC3-208ENST00000496910 SPIN2BQ9BPZ2 258 aa2.41□□□□□ -2.02
EXOSC3-208ENST00000496910 RPS10P5Q9NQ39 176 aa2.41□□□□□ -2.02
EXOSC3-208ENST00000496910 ZNF222Q9UK12 451 aa2.41□□□□□ -2.02
EXOSC3-208ENST00000496910 PCTPQ9UKL6 214 aa2.41□□□□□ -2.02
EXOSC3-208ENST00000496910 IGKV3D-20A0A0C4DH25 116 aa2.4□□□□□ -2.03
EXOSC3-208ENST00000496910 A0A1B0GW64 132 aa2.4□□□□□ -2.03
EXOSC3-208ENST00000496910 A0A1W2PP18 115 aa2.4□□□□□ -2.03
EXOSC3-208ENST00000496910 DUXBA0A1W2PPF3 345 aa2.4□□□□□ -2.03
EXOSC3-208ENST00000496910 TMEM223A0PJW6 202 aa2.4□□□□□ -2.03
EXOSC3-208ENST00000496910 IGLL5B9A064 214 aa2.4□□□□□ -2.03
EXOSC3-208ENST00000496910 J3QRK9 145 aa2.4□□□□□ -2.03
EXOSC3-208ENST00000496910 ZNF73O43830 326 aaPredicted RBP2.4□□□□□ -2.03
EXOSC3-208ENST00000496910 ZNF324O75467 553 aaPredicted RBP2.4□□□□□ -2.03
EXOSC3-208ENST00000496910 PGLYRP1O75594 196 aaPredicted RBP2.4□□□□□ -2.03
EXOSC3-208ENST00000496910 IGKV1-5P01602 117 aa2.4□□□□□ -2.03
EXOSC3-208ENST00000496910 SRP19P09132 144 aaKnown RBP2.4□□□□□ -2.03
EXOSC3-208ENST00000496910 ZNF286BP0CG31 522 aa2.4□□□□□ -2.03
EXOSC3-208ENST00000496910 ZNF705DP0CH99 300 aaPredicted RBP2.4□□□□□ -2.03
EXOSC3-208ENST00000496910 S100PP25815 95 aa2.4□□□□□ -2.03
EXOSC3-208ENST00000496910 ZNF80P51504 273 aaPredicted RBP2.4□□□□□ -2.03
EXOSC3-208ENST00000496910 KLF3P57682 345 aaPredicted RBP2.4□□□□□ -2.03
EXOSC3-208ENST00000496910 SLC38A11Q08AI6 406 aa2.4□□□□□ -2.03
EXOSC3-208ENST00000496910 LGALS9BQ3B8N2 356 aa2.4□□□□□ -2.03
EXOSC3-208ENST00000496910 SCGB2B2Q4G0G5 96 aa2.4□□□□□ -2.03
EXOSC3-208ENST00000496910 DNLZQ5SXM8 178 aa2.4□□□□□ -2.03
EXOSC3-208ENST00000496910 LELP1Q5T871 98 aa2.4□□□□□ -2.03
EXOSC3-208ENST00000496910 LGALS9CQ6DKI2 356 aa2.4□□□□□ -2.03
EXOSC3-208ENST00000496910 SCXQ7RTU7 201 aa2.4□□□□□ -2.03
EXOSC3-208ENST00000496910 H1FOOQ8IZA3 346 aaPredicted RBP2.4□□□□□ -2.03
EXOSC3-208ENST00000496910 DAND5Q8N907 189 aa2.4□□□□□ -2.03
EXOSC3-208ENST00000496910 TMEM229BQ8NBD8 167 aa2.4□□□□□ -2.03
EXOSC3-208ENST00000496910 MUC7Q8TAX7 377 aa2.4□□□□□ -2.03
EXOSC3-208ENST00000496910 CANT1Q8WVQ1 401 aa2.4□□□□□ -2.03
EXOSC3-208ENST00000496910 NARS2Q96I59 477 aaKnown RBP2.4□□□□□ -2.03
EXOSC3-208ENST00000496910 C12orf57Q99622 126 aa2.4□□□□□ -2.03
EXOSC3-208ENST00000496910 OR2D2Q9H210 308 aa2.4□□□□□ -2.03
EXOSC3-208ENST00000496910 EFCAB1Q9HAE3 211 aa2.4□□□□□ -2.03
EXOSC3-208ENST00000496910 CACYBPQ9HB71 228 aaKnown RBP2.4□□□□□ -2.03
EXOSC3-208ENST00000496910 SPANXCQ9NY87 97 aa2.4□□□□□ -2.03
EXOSC3-208ENST00000496910 MED31Q9Y3C7 131 aa2.4□□□□□ -2.03
EXOSC3-208ENST00000496910 U3KQ87 197 aa2.4□□□□□ -2.03
EXOSC3-208ENST00000496910 AGRNO00468 2067 aa2.39□□□□□ -2.03
EXOSC3-208ENST00000496910 A0A087WUU8 490 aa2.39□□□□□ -2.03
EXOSC3-208ENST00000496910 MEIKINA0A087WXM9 373 aa2.39□□□□□ -2.03
EXOSC3-208ENST00000496910 A0A096LPI6 279 aa2.39□□□□□ -2.03
EXOSC3-208ENST00000496910 IGHV3-21A0A0B4J1V1 117 aa2.39□□□□□ -2.03
EXOSC3-208ENST00000496910 IGHV1-3A0A0C4DH29 117 aa2.39□□□□□ -2.03
EXOSC3-208ENST00000496910 NKX2-6A6NCS4 301 aa2.39□□□□□ -2.03
EXOSC3-208ENST00000496910 C9JAW5 83 aa2.39□□□□□ -2.03
EXOSC3-208ENST00000496910 I3L521 148 aa2.39□□□□□ -2.03
EXOSC3-208ENST00000496910 IGF2P01344 180 aa2.39□□□□□ -2.03
EXOSC3-208ENST00000496910 DBIP07108 87 aaKnown RBP2.39□□□□□ -2.03
EXOSC3-208ENST00000496910 FKBP2P26885 142 aaKnown RBP2.39□□□□□ -2.03
EXOSC3-208ENST00000496910 CRYBB3P26998 211 aa2.39□□□□□ -2.03
EXOSC3-208ENST00000496910 S100A11P31949 105 aa2.39□□□□□ -2.03
EXOSC3-208ENST00000496910 RPS10P46783 165 aaKnown RBP2.39□□□□□ -2.03
EXOSC3-208ENST00000496910 NUDT2P50583 147 aa2.39□□□□□ -2.03
EXOSC3-208ENST00000496910 INSL3P51460 131 aa2.39□□□□□ -2.03
EXOSC3-208ENST00000496910 TAS2R30P59541 319 aa2.39□□□□□ -2.03
EXOSC3-208ENST00000496910 RRAS2P62070 204 aaPredicted RBP2.39□□□□□ -2.03
EXOSC3-208ENST00000496910 IGLV3-21P80748 117 aaPredicted RBP2.39□□□□□ -2.03
EXOSC3-208ENST00000496910 PSG9Q00887 426 aa2.39□□□□□ -2.03
EXOSC3-208ENST00000496910 HIST1H1AQ02539 215 aaPredicted RBP2.39□□□□□ -2.03
EXOSC3-208ENST00000496910 PLCXD2Q0VAA5 305 aa2.39□□□□□ -2.03
EXOSC3-208ENST00000496910 C15orf32Q32M92 178 aa2.39□□□□□ -2.03
EXOSC3-208ENST00000496910 MORN2Q502X0 79 aa2.39□□□□□ -2.03
EXOSC3-208ENST00000496910 FAM104BQ5XKR9 115 aa2.39□□□□□ -2.03
EXOSC3-208ENST00000496910 IDO2Q6ZQW0 420 aa2.39□□□□□ -2.03
EXOSC3-208ENST00000496910 LCA10Q71F78 164 aa2.39□□□□□ -2.03
EXOSC3-208ENST00000496910 KTN1-AS1Q86SY8 53 aa2.39□□□□□ -2.03
EXOSC3-208ENST00000496910 LHFPL1Q86WI0 220 aa2.39□□□□□ -2.03
EXOSC3-208ENST00000496910 AMN1Q8IY45 258 aa2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms