RNA–Protein interactions for RNA: ENST00000496622.1

SSBP1-213, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 1 (best)

Gene SSBP1, Length 2,620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-213ENST00000496622 HIST2H2BCQ6DN03 193 aa4.94□□□□□ -1.62
SSBP1-213ENST00000496622 HIST2H2BDQ6DRA6 164 aa4.94□□□□□ -1.62
SSBP1-213ENST00000496622 LCN15Q6UWW0 184 aa4.94□□□□□ -1.62
SSBP1-213ENST00000496622 SGK494Q96LW2 274 aa4.94□□□□□ -1.62
SSBP1-213ENST00000496622 IMMP2LQ96T52 175 aa4.94□□□□□ -1.62
SSBP1-213ENST00000496622 LIN7CQ9NUP9 197 aaKnown RBP4.94□□□□□ -1.62
SSBP1-213ENST00000496622 A0A1W2PRD5 423 aa4.94□□□□□ -1.62
SSBP1-213ENST00000496622 A0A1W2PRF3 423 aa4.94□□□□□ -1.62
SSBP1-213ENST00000496622 A0A1W2PRM7 423 aa4.94□□□□□ -1.62
SSBP1-213ENST00000496622 SRRM4A7MD48 611 aaKnown RBP4.94□□□□□ -1.62
SSBP1-213ENST00000496622 VWC2LB2RUY7 222 aa4.94□□□□□ -1.62
SSBP1-213ENST00000496622 OR9G9P0C7N8 305 aa4.94□□□□□ -1.62
SSBP1-213ENST00000496622 CAMPP49913 170 aa4.94□□□□□ -1.62
SSBP1-213ENST00000496622 DYNLT3P51808 116 aa4.94□□□□□ -1.62
SSBP1-213ENST00000496622 RND2P52198 227 aa4.94□□□□□ -1.62
SSBP1-213ENST00000496622 BVES-AS1Q5T3Y7 98 aa4.94□□□□□ -1.62
SSBP1-213ENST00000496622 OR51G1Q8NGK1 321 aa4.94□□□□□ -1.62
SSBP1-213ENST00000496622 CDIP1Q9H305 208 aa4.94□□□□□ -1.62
SSBP1-213ENST00000496622 C11orf1Q9H5F2 150 aa4.94□□□□□ -1.62
SSBP1-213ENST00000496622 ATRQ13535 2644 aa4.94□□□□□ -1.62
SSBP1-213ENST00000496622 C9JAW5 83 aa4.93□□□□□ -1.62
SSBP1-213ENST00000496622 NDUFB3O43676 98 aa4.93□□□□□ -1.62
SSBP1-213ENST00000496622 SYNGR2O43760 224 aa4.93□□□□□ -1.62
SSBP1-213ENST00000496622 MOSP00540 346 aa4.93□□□□□ -1.62
SSBP1-213ENST00000496622 SRIP30626 198 aa4.93□□□□□ -1.62
SSBP1-213ENST00000496622 SULT1A2P50226 295 aa4.93□□□□□ -1.62
SSBP1-213ENST00000496622 MIDNQ504T8 468 aa4.93□□□□□ -1.62
SSBP1-213ENST00000496622 RASL11AQ6T310 242 aa4.93□□□□□ -1.62
SSBP1-213ENST00000496622 HAPLN4Q86UW8 402 aa4.93□□□□□ -1.62
SSBP1-213ENST00000496622 SPIN2AQ99865 258 aa4.93□□□□□ -1.62
SSBP1-213ENST00000496622 SPIN2BQ9BPZ2 258 aa4.93□□□□□ -1.62
SSBP1-213ENST00000496622 HSPB9Q9BQS6 159 aa4.93□□□□□ -1.62
SSBP1-213ENST00000496622 RETNQ9HD89 108 aa4.93□□□□□ -1.62
SSBP1-213ENST00000496622 HIGD1AQ9Y241 93 aa4.93□□□□□ -1.62
SSBP1-213ENST00000496622 C8orf88P0DMB2 117 aa4.93□□□□□ -1.62
SSBP1-213ENST00000496622 APELAP0DMC3 54 aa4.93□□□□□ -1.62
SSBP1-213ENST00000496622 CR1LQ2VPA4 569 aa4.93□□□□□ -1.62
SSBP1-213ENST00000496622 MEIG1Q5JSS6 88 aa4.93□□□□□ -1.62
SSBP1-213ENST00000496622 TTC9CQ8N5M4 171 aa4.93□□□□□ -1.62
SSBP1-213ENST00000496622 C8orf31Q8N9H6 132 aa4.93□□□□□ -1.62
SSBP1-213ENST00000496622 WIPF2Q8TF74 440 aaPredicted RBP4.93□□□□□ -1.62
SSBP1-213ENST00000496622 RITA1Q96K30 269 aa4.93□□□□□ -1.62
SSBP1-213ENST00000496622 ZNF714Q96N38 554 aa4.93□□□□□ -1.62
SSBP1-213ENST00000496622 HSD17B10Q99714 261 aaKnown RBP4.93□□□□□ -1.62
SSBP1-213ENST00000496622 SPAG8Q99932 426 aaPredicted RBP4.93□□□□□ -1.62
SSBP1-213ENST00000496622 KRTAP9-9Q9BYP9 154 aa4.93□□□□□ -1.62
SSBP1-213ENST00000496622 KRTAP9-4Q9BYQ2 154 aa4.93□□□□□ -1.62
SSBP1-213ENST00000496622 hADV38S2A0JD32 116 aa4.93□□□□□ -1.62
SSBP1-213ENST00000496622 FAM90A9PA6NNJ1 464 aa4.93□□□□□ -1.62
SSBP1-213ENST00000496622 DIRC3C9JPN6 131 aa4.93□□□□□ -1.62
SSBP1-213ENST00000496622 J3KT08 172 aa4.93□□□□□ -1.62
SSBP1-213ENST00000496622 NUDT3O95989 172 aa4.93□□□□□ -1.62
SSBP1-213ENST00000496622 CA1P00915 261 aaPredicted RBP4.93□□□□□ -1.62
SSBP1-213ENST00000496622 COX7A1P24310 79 aa4.93□□□□□ -1.62
SSBP1-213ENST00000496622 CD24P25063 80 aa4.93□□□□□ -1.62
SSBP1-213ENST00000496622 YPEL3P61236 119 aaPredicted RBP4.93□□□□□ -1.62
SSBP1-213ENST00000496622 ACOT6Q3I5F7 207 aaPredicted RBP4.93□□□□□ -1.62
SSBP1-213ENST00000496622 ABHD12Q8N2K0 398 aa4.93□□□□□ -1.62
SSBP1-213ENST00000496622 OR5A1Q8NGJ0 315 aa4.93□□□□□ -1.62
SSBP1-213ENST00000496622 OR2K2Q8NGT1 345 aa4.93□□□□□ -1.62
SSBP1-213ENST00000496622 VSIRQ9H7M9 311 aa4.93□□□□□ -1.62
SSBP1-213ENST00000496622 EDA2RQ9HAV5 297 aa4.93□□□□□ -1.62
SSBP1-213ENST00000496622 SPANXA1Q9NS26 97 aa4.93□□□□□ -1.62
SSBP1-213ENST00000496622 IDI2-AS1Q9NZ38 188 aa4.93□□□□□ -1.62
SSBP1-213ENST00000496622 PSENENQ9NZ42 101 aa4.93□□□□□ -1.62
SSBP1-213ENST00000496622 RPUSD1Q9UJJ7 312 aaKnown RBP4.93□□□□□ -1.62
SSBP1-213ENST00000496622 DSCAML1Q8TD84 2053 aa4.92□□□□□ -1.62
SSBP1-213ENST00000496622 GPR137BO60478 399 aa4.92□□□□□ -1.62
SSBP1-213ENST00000496622 PLA2G1BP04054 148 aaKnown RBP4.92□□□□□ -1.62
SSBP1-213ENST00000496622 DANCRP0C864 163 aa4.92□□□□□ -1.62
SSBP1-213ENST00000496622 MED14OSP0DP75 135 aa4.92□□□□□ -1.62
SSBP1-213ENST00000496622 TPPP2P59282 170 aa4.92□□□□□ -1.62
SSBP1-213ENST00000496622 ADIRFQ15847 76 aa4.92□□□□□ -1.62
SSBP1-213ENST00000496622 RPEL1Q2QD12 228 aa4.92□□□□□ -1.62
SSBP1-213ENST00000496622 TMEM97Q5BJF2 176 aa4.92□□□□□ -1.62
SSBP1-213ENST00000496622 ZFAND6Q6FIF0 208 aa4.92□□□□□ -1.62
SSBP1-213ENST00000496622 Q8N976 141 aa4.92□□□□□ -1.62
SSBP1-213ENST00000496622 SYT8Q8NBV8 401 aa4.92□□□□□ -1.62
SSBP1-213ENST00000496622 CMTM2Q8TAZ6 248 aa4.92□□□□□ -1.62
SSBP1-213ENST00000496622 TVP23CQ96ET8 276 aa4.92□□□□□ -1.62
SSBP1-213ENST00000496622 AP1S3Q96PC3 154 aa4.92□□□□□ -1.62
SSBP1-213ENST00000496622 S1PR3Q99500 378 aa4.92□□□□□ -1.62
SSBP1-213ENST00000496622 RASL11BQ9BPW5 248 aa4.92□□□□□ -1.62
SSBP1-213ENST00000496622 MRPL20Q9BYC9 149 aaKnown RBP4.92□□□□□ -1.62
SSBP1-213ENST00000496622 RNASE7Q9H1E1 156 aaKnown RBP4.92□□□□□ -1.62
SSBP1-213ENST00000496622 PRO0628Q9UI54 55 aa4.92□□□□□ -1.62
SSBP1-213ENST00000496622 LINC00312Q9Y6C7 94 aa4.92□□□□□ -1.62
SSBP1-213ENST00000496622 A1L4Q6 167 aa4.92□□□□□ -1.62
SSBP1-213ENST00000496622 CEBPZOSA8MTT3 80 aa4.92□□□□□ -1.62
SSBP1-213ENST00000496622 E7EUB6 86 aa4.92□□□□□ -1.62
SSBP1-213ENST00000496622 JTBO76095 146 aa4.92□□□□□ -1.62
SSBP1-213ENST00000496622 PRH1P02810 166 aa4.92□□□□□ -1.62
SSBP1-213ENST00000496622 REG1AP05451 166 aa4.92□□□□□ -1.62
SSBP1-213ENST00000496622 LCE4AQ5TA78 99 aa4.92□□□□□ -1.62
SSBP1-213ENST00000496622 STHQ8IWL8 128 aa4.92□□□□□ -1.62
SSBP1-213ENST00000496622 OR4C13Q8NGP0 309 aa4.92□□□□□ -1.62
SSBP1-213ENST00000496622 OSR1Q8TAX0 266 aaPredicted RBP4.92□□□□□ -1.62
SSBP1-213ENST00000496622 LSM10Q969L4 123 aaKnown RBP4.92□□□□□ -1.62
SSBP1-213ENST00000496622 GGTLC1Q9BX51 225 aa4.92□□□□□ -1.62
SSBP1-213ENST00000496622 TECRQ9NZ01 308 aaKnown RBP4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms