RNA–Protein interactions for RNA: ENST00000496081.5

HLA-A-208, Transcript of major histocompatibility complex, class I, A, humanhuman

Gene HLA-A, Length 1,786 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-208ENST00000496081 IGHV3-49A0A0A0MS15 119 aa12.56□□□□□ -0.4
HLA-A-208ENST00000496081 IGHV3-74A0A0B4J1X5 117 aa12.56□□□□□ -0.4
HLA-A-208ENST00000496081 ISLRO14498 428 aa12.56□□□□□ -0.4
HLA-A-208ENST00000496081 IGLV2-8P01709 118 aa12.56□□□□□ -0.4
HLA-A-208ENST00000496081 ELOBQ15370 118 aa12.56□□□□□ -0.4
HLA-A-208ENST00000496081 TMEM183BQ1AE95 376 aa12.56□□□□□ -0.4
HLA-A-208ENST00000496081 C1orf194Q5T5A4 169 aa12.56□□□□□ -0.4
HLA-A-208ENST00000496081 ANK3Q12955 4377 aaKnown RBP12.56□□□□□ -0.4
HLA-A-208ENST00000496081 H7BYZ3 331 aa12.56□□□□□ -0.4
HLA-A-208ENST00000496081 LY6G6DO95868 133 aa12.56□□□□□ -0.4
HLA-A-208ENST00000496081 RNF152Q8N8N0 203 aa12.56□□□□□ -0.4
HLA-A-208ENST00000496081 CMTM2Q8TAZ6 248 aa12.56□□□□□ -0.4
HLA-A-208ENST00000496081 SFRP2Q96HF1 295 aa12.56□□□□□ -0.4
HLA-A-208ENST00000496081 GPR82Q96P67 336 aa12.56□□□□□ -0.4
HLA-A-208ENST00000496081 MTORP42345 2549 aa12.55□□□□□ -0.4
HLA-A-208ENST00000496081 ATF4P18848 351 aaPredicted RBP12.55□□□□□ -0.4
HLA-A-208ENST00000496081 SCGB2A2Q13296 93 aa12.55□□□□□ -0.4
HLA-A-208ENST00000496081 OR5I1Q13606 314 aa12.55□□□□□ -0.4
HLA-A-208ENST00000496081 Q6ZSV7 163 aa12.55□□□□□ -0.4
HLA-A-208ENST00000496081 TMEM190Q8WZ59 177 aa12.55□□□□□ -0.4
HLA-A-208ENST00000496081 SGK494Q96LW2 274 aa12.55□□□□□ -0.4
HLA-A-208ENST00000496081 UBE2G1P62253 170 aa12.54□□□□□ -0.4
HLA-A-208ENST00000496081 PSG9Q00887 426 aa12.54□□□□□ -0.4
HLA-A-208ENST00000496081 AAMDCQ9H7C9 122 aa12.54□□□□□ -0.4
HLA-A-208ENST00000496081 MAST4O15021 2626 aa12.54□□□□□ -0.4
HLA-A-208ENST00000496081 A0A087X0K7 114 aa12.53□□□□□ -0.4
HLA-A-208ENST00000496081 ZNF320A2RRD8 509 aa12.53□□□□□ -0.4
HLA-A-208ENST00000496081 GCGP01275 180 aa12.53□□□□□ -0.4
HLA-A-208ENST00000496081 CXCL1P09341 107 aa12.53□□□□□ -0.4
HLA-A-208ENST00000496081 BAGE2Q86Y30 109 aa12.53□□□□□ -0.4
HLA-A-208ENST00000496081 KLHDC1Q8N7A1 406 aa12.53□□□□□ -0.4
HLA-A-208ENST00000496081 NHLRC2Q8NBF2 726 aa12.53□□□□□ -0.4
HLA-A-208ENST00000496081 UBE2E2Q96LR5 201 aa12.53□□□□□ -0.4
HLA-A-208ENST00000496081 HIVEP1P15822 2718 aa12.53□□□□□ -0.4
HLA-A-208ENST00000496081 TGIF2-C20orf24A0A0A6YYL0 155 aa12.53□□□□□ -0.4
HLA-A-208ENST00000496081 ZNF785A8K8V0 405 aa12.53□□□□□ -0.4
HLA-A-208ENST00000496081 M0R3E3 92 aa12.53□□□□□ -0.4
HLA-A-208ENST00000496081 PPP1R2P9O14990 202 aa12.53□□□□□ -0.4
HLA-A-208ENST00000496081 ZNF253O75346 499 aa12.53□□□□□ -0.4
HLA-A-208ENST00000496081 S100A9P06702 114 aaKnown RBP12.53□□□□□ -0.4
HLA-A-208ENST00000496081 SRD5A1P18405 259 aa12.53□□□□□ -0.4
HLA-A-208ENST00000496081 GALR1P47211 349 aa12.53□□□□□ -0.4
HLA-A-208ENST00000496081 C16orf54Q6UWD8 224 aa12.53□□□□□ -0.4
HLA-A-208ENST00000496081 GOLT1AQ6ZVE7 132 aa12.53□□□□□ -0.4
HLA-A-208ENST00000496081 FMC1Q96HJ9 113 aa12.53□□□□□ -0.4
HLA-A-208ENST00000496081 HIVEP2P31629 2446 aa12.52□□□□□ -0.4
HLA-A-208ENST00000496081 CRYBA1P05813 215 aa12.52□□□□□ -0.41
HLA-A-208ENST00000496081 PFN1P07737 140 aaKnown RBP12.52□□□□□ -0.41
HLA-A-208ENST00000496081 LGALS1P09382 135 aaKnown RBP12.52□□□□□ -0.41
HLA-A-208ENST00000496081 MGST1P10620 155 aaKnown RBP12.52□□□□□ -0.41
HLA-A-208ENST00000496081 RAB5AP20339 215 aa12.52□□□□□ -0.41
HLA-A-208ENST00000496081 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.52□□□□□ -0.41
HLA-A-208ENST00000496081 Q71RC1 249 aaPredicted RBP12.52□□□□□ -0.41
HLA-A-208ENST00000496081 OR10G8Q8NGN5 311 aa12.52□□□□□ -0.41
HLA-A-208ENST00000496081 ZNF331Q9NQX6 463 aaPredicted RBP12.52□□□□□ -0.41
HLA-A-208ENST00000496081 CUBNO60494 3623 aa12.51□□□□□ -0.41
HLA-A-208ENST00000496081 TRAV8-1A0A0A6YYK1 113 aa12.51□□□□□ -0.41
HLA-A-208ENST00000496081 DIRC3C9JPN6 131 aa12.51□□□□□ -0.41
HLA-A-208ENST00000496081 IGLV2-11P01706 119 aa12.51□□□□□ -0.41
HLA-A-208ENST00000496081 GPHB5Q86YW7 130 aa12.51□□□□□ -0.41
HLA-A-208ENST00000496081 GLMPQ8WWB7 406 aa12.51□□□□□ -0.41
HLA-A-208ENST00000496081 LTAP01374 205 aa12.51□□□□□ -0.41
HLA-A-208ENST00000496081 RNASE1P07998 156 aaKnown RBP12.51□□□□□ -0.41
HLA-A-208ENST00000496081 PRB4P10163 310 aaPredicted RBP12.51□□□□□ -0.41
HLA-A-208ENST00000496081 FOSL1P15407 271 aa12.51□□□□□ -0.41
HLA-A-208ENST00000496081 ERVFC1-1P60608 527 aa12.51□□□□□ -0.41
HLA-A-208ENST00000496081 FAM106AQ4KMX7 169 aa12.51□□□□□ -0.41
HLA-A-208ENST00000496081 IGFL4Q6B9Z1 124 aa12.51□□□□□ -0.41
HLA-A-208ENST00000496081 NF1P21359 2839 aa12.5□□□□□ -0.41
HLA-A-208ENST00000496081 FOLR2P14207 255 aa12.5□□□□□ -0.41
HLA-A-208ENST00000496081 TM4SF20Q53R12 229 aa12.5□□□□□ -0.41
HLA-A-208ENST00000496081 ZNF418Q8TF45 676 aaPredicted RBP12.5□□□□□ -0.41
HLA-A-208ENST00000496081 SMIM12Q96EX1 92 aa12.5□□□□□ -0.41
HLA-A-208ENST00000496081 MLST8Q9BVC4 326 aa12.5□□□□□ -0.41
HLA-A-208ENST00000496081 RNASE7Q9H1E1 156 aaKnown RBP12.5□□□□□ -0.41
HLA-A-208ENST00000496081 DAZ1Q9NQZ3 744 aaKnown RBP12.5□□□□□ -0.41
HLA-A-208ENST00000496081 F8P00451 2351 aa12.49□□□□□ -0.41
HLA-A-208ENST00000496081 TRBV24-1A0A075B6N3 115 aa12.49□□□□□ -0.41
HLA-A-208ENST00000496081 LOC105371267A0A1B0GV96 52 aa12.49□□□□□ -0.41
HLA-A-208ENST00000496081 S100PP25815 95 aa12.49□□□□□ -0.41
HLA-A-208ENST00000496081 HLA-DMBP28068 263 aa12.49□□□□□ -0.41
HLA-A-208ENST00000496081 HILS1P60008 231 aa12.49□□□□□ -0.41
HLA-A-208ENST00000496081 RPEL1Q2QD12 228 aa12.49□□□□□ -0.41
HLA-A-208ENST00000496081 TCTEX1D4Q5JR98 221 aa12.49□□□□□ -0.41
HLA-A-208ENST00000496081 Q86TA4 180 aa12.49□□□□□ -0.41
HLA-A-208ENST00000496081 TMEM75Q8N9X5 138 aa12.49□□□□□ -0.41
HLA-A-208ENST00000496081 OSTCQ9NRP0 149 aa12.49□□□□□ -0.41
HLA-A-208ENST00000496081 IGHV7-4-1A0A0J9YVY3 117 aa12.48□□□□□ -0.41
HLA-A-208ENST00000496081 TRBV6-1A0A0K0K1D8 114 aa12.48□□□□□ -0.41
HLA-A-208ENST00000496081 A0A1W2PS18 150 aa12.48□□□□□ -0.41
HLA-A-208ENST00000496081 K7EMT4 169 aa12.48□□□□□ -0.41
HLA-A-208ENST00000496081 K7EQM0 130 aa12.48□□□□□ -0.41
HLA-A-208ENST00000496081 CSN1S1P47710 185 aa12.48□□□□□ -0.41
HLA-A-208ENST00000496081 PSG3Q16557 428 aa12.48□□□□□ -0.41
HLA-A-208ENST00000496081 ARL6IP6Q8N6S5 226 aa12.48□□□□□ -0.41
HLA-A-208ENST00000496081 PYGO2Q9BRQ0 406 aa12.48□□□□□ -0.41
HLA-A-208ENST00000496081 V9GYV3 84 aa12.48□□□□□ -0.41
HLA-A-208ENST00000496081 IGHV4OR15-8A0A075B7B6 117 aa12.48□□□□□ -0.41
HLA-A-208ENST00000496081 A0A087WW49 117 aa12.48□□□□□ -0.41
HLA-A-208ENST00000496081 MEOX2P50222 304 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms