RNA–Protein interactions for RNA: ENST00000495910.6

NF1-216, Transcript of neurofibromin 1, humanhuman

TSL 2

Gene NF1, Length 8,223 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-216ENST00000495910 PRR31Q5SQ13 230 aa4.24□□□□□ -1.73
NF1-216ENST00000495910 EXOC3-AS1Q8N2X6 119 aa4.24□□□□□ -1.73
NF1-216ENST00000495910 LHFPL6Q9Y693 200 aa4.24□□□□□ -1.73
NF1-216ENST00000495910 H0Y9J4 135 aa4.24□□□□□ -1.73
NF1-216ENST00000495910 NDPQ00604 133 aa4.24□□□□□ -1.73
NF1-216ENST00000495910 VWC2Q2TAL6 325 aa4.24□□□□□ -1.73
NF1-216ENST00000495910 C9orf47Q6ZRZ4 202 aa4.24□□□□□ -1.73
NF1-216ENST00000495910 COX7B2Q8TF08 81 aa4.24□□□□□ -1.73
NF1-216ENST00000495910 SDK1Q7Z5N4 2213 aa4.24□□□□□ -1.73
NF1-216ENST00000495910 DEFB130BP0DP73 79 aa4.24□□□□□ -1.73
NF1-216ENST00000495910 DEFB130AP0DP74 79 aa4.24□□□□□ -1.73
NF1-216ENST00000495910 DYNAPQ8N1N2 210 aa4.24□□□□□ -1.73
NF1-216ENST00000495910 TIMM17AQ99595 171 aa4.24□□□□□ -1.73
NF1-216ENST00000495910 RFNGQ9Y644 331 aa4.24□□□□□ -1.73
NF1-216ENST00000495910 SAA2-SAA4A0A096LPE2 208 aa4.24□□□□□ -1.73
NF1-216ENST00000495910 H0YIZ8 118 aa4.24□□□□□ -1.73
NF1-216ENST00000495910 SAA2P0DJI9 122 aaPredicted RBP4.24□□□□□ -1.73
NF1-216ENST00000495910 FAM168AQ92567 244 aa4.24□□□□□ -1.73
NF1-216ENST00000495910 LYZL4Q96KX0 146 aa4.24□□□□□ -1.73
NF1-216ENST00000495910 HS3ST6Q96QI5 342 aa4.24□□□□□ -1.73
NF1-216ENST00000495910 IGLV3-16A0A075B6K0 115 aa4.24□□□□□ -1.73
NF1-216ENST00000495910 CCL25O15444 150 aa4.24□□□□□ -1.73
NF1-216ENST00000495910 MYEOVQ96EZ4 313 aa4.24□□□□□ -1.73
NF1-216ENST00000495910 YPEL2Q96QA6 119 aa4.24□□□□□ -1.73
NF1-216ENST00000495910 AMELYQ99218 206 aa4.24□□□□□ -1.73
NF1-216ENST00000495910 FHL5Q5TD97 284 aa4.24□□□□□ -1.73
NF1-216ENST00000495910 HIST2H2BCQ6DN03 193 aa4.24□□□□□ -1.73
NF1-216ENST00000495910 HIST2H2BDQ6DRA6 164 aa4.24□□□□□ -1.73
NF1-216ENST00000495910 C10orf105Q8TEF2 133 aa4.24□□□□□ -1.73
NF1-216ENST00000495910 OPRPNQ99935 248 aaPredicted RBP4.24□□□□□ -1.73
NF1-216ENST00000495910 RALGAPA2Q2PPJ7 1873 aa4.23□□□□□ -1.73
NF1-216ENST00000495910 NTN3O00634 580 aaPredicted RBP4.23□□□□□ -1.73
NF1-216ENST00000495910 PIN1P1O15428 100 aa4.23□□□□□ -1.73
NF1-216ENST00000495910 ZFP36L1Q07352 338 aaKnown RBP4.23□□□□□ -1.73
NF1-216ENST00000495910 CR1LQ2VPA4 569 aa4.23□□□□□ -1.73
NF1-216ENST00000495910 Q6ZNB5 142 aa4.23□□□□□ -1.73
NF1-216ENST00000495910 SIGLEC8Q9NYZ4 499 aa4.23□□□□□ -1.73
NF1-216ENST00000495910 METRNQ9UJH8 293 aa4.23□□□□□ -1.73
NF1-216ENST00000495910 TP53BP1Q12888 1972 aaPredicted RBP4.23□□□□□ -1.73
NF1-216ENST00000495910 CKAP5Q14008 2032 aa4.23□□□□□ -1.73
NF1-216ENST00000495910 F5H768 121 aa4.23□□□□□ -1.73
NF1-216ENST00000495910 RPL15P61313 204 aaKnown RBP4.23□□□□□ -1.73
NF1-216ENST00000495910 C1orf210Q8IVY1 113 aa4.23□□□□□ -1.73
NF1-216ENST00000495910 ZNF503Q96F45 646 aa4.23□□□□□ -1.73
NF1-216ENST00000495910 TRGV9Q99603 122 aa4.23□□□□□ -1.73
NF1-216ENST00000495910 WFDC1Q9HC57 220 aa4.23□□□□□ -1.73
NF1-216ENST00000495910 SCN1AP35498 2009 aa4.23□□□□□ -1.73
NF1-216ENST00000495910 DOCK6Q96HP0 2047 aa4.23□□□□□ -1.73
NF1-216ENST00000495910 IGHV4-4A0A075B6R2 117 aa4.23□□□□□ -1.73
NF1-216ENST00000495910 A0A1B0GTI1 187 aa4.23□□□□□ -1.73
NF1-216ENST00000495910 PRSS46E5RG02 174 aa4.23□□□□□ -1.73
NF1-216ENST00000495910 UQCRQO14949 82 aa4.23□□□□□ -1.73
NF1-216ENST00000495910 GLI3P10071 1580 aa4.23□□□□□ -1.73
NF1-216ENST00000495910 IGLL5B9A064 214 aa4.23□□□□□ -1.73
NF1-216ENST00000495910 CD55P08174 381 aa4.23□□□□□ -1.73
NF1-216ENST00000495910 TRBV7-1A0A0A6YYK4 115 aa4.23□□□□□ -1.73
NF1-216ENST00000495910 IGHMP01871 453 aa4.23□□□□□ -1.73
NF1-216ENST00000495910 LIMS1P48059 325 aa4.23□□□□□ -1.73
NF1-216ENST00000495910 TIRAPP58753 221 aa4.23□□□□□ -1.73
NF1-216ENST00000495910 RSPO2Q6UXX9 243 aaPredicted RBP4.23□□□□□ -1.73
NF1-216ENST00000495910 FAM110AQ9BQ89 295 aa4.23□□□□□ -1.73
NF1-216ENST00000495910 ELANEP08246 267 aa4.23□□□□□ -1.73
NF1-216ENST00000495910 ZCCHC24Q8N2G6 241 aaKnown RBP4.23□□□□□ -1.73
NF1-216ENST00000495910 GAFA1Q96PS6 74 aa4.23□□□□□ -1.73
NF1-216ENST00000495910 QSER1Q2KHR3 1735 aa4.23□□□□□ -1.73
NF1-216ENST00000495910 STRCP1A6NGW2 1772 aa4.22□□□□□ -1.73
NF1-216ENST00000495910 CFHR1Q03591 330 aa4.22□□□□□ -1.73
NF1-216ENST00000495910 TREML4Q6UXN2 200 aa4.22□□□□□ -1.73
NF1-216ENST00000495910 ARMS2P0C7Q2 107 aa4.22□□□□□ -1.73
NF1-216ENST00000495910 PDE6GP18545 87 aa4.22□□□□□ -1.73
NF1-216ENST00000495910 FAM216BQ8N7L0 139 aa4.22□□□□□ -1.73
NF1-216ENST00000495910 SLC25A29Q8N8R3 303 aa4.22□□□□□ -1.73
NF1-216ENST00000495910 DKK2Q9UBU2 259 aa4.22□□□□□ -1.73
NF1-216ENST00000495910 MSRB2Q9Y3D2 182 aa4.22□□□□□ -1.73
NF1-216ENST00000495910 TRBV6-7A0A0A0MS04 114 aa4.22□□□□□ -1.73
NF1-216ENST00000495910 IGKV1-5P01602 117 aa4.22□□□□□ -1.73
NF1-216ENST00000495910 SRSF7Q16629 238 aaKnown RBP eCLIP4.22□□□□□ -1.73
NF1-216ENST00000495910 Q86TA4 180 aa4.22□□□□□ -1.73
NF1-216ENST00000495910 ICOSQ9Y6W8 199 aa4.22□□□□□ -1.73
NF1-216ENST00000495910 F8VRH5 84 aa4.22□□□□□ -1.73
NF1-216ENST00000495910 HRKO00198 91 aa4.22□□□□□ -1.73
NF1-216ENST00000495910 IGLV3-25P01717 112 aa4.22□□□□□ -1.73
NF1-216ENST00000495910 SH2D6Q7Z4S9 175 aa4.22□□□□□ -1.73
NF1-216ENST00000495910 Q8TAT8 98 aa4.22□□□□□ -1.73
NF1-216ENST00000495910 UPK3BQ9BT76 320 aa4.22□□□□□ -1.73
NF1-216ENST00000495910 TMEM133Q9H2Q1 129 aa4.22□□□□□ -1.73
NF1-216ENST00000495910 FAM60AQ9NP50 221 aa4.22□□□□□ -1.73
NF1-216ENST00000495910 COL24A1Q17RW2 1714 aa4.22□□□□□ -1.73
NF1-216ENST00000495910 SMIM27A0A1W2PRY6 76 aa4.22□□□□□ -1.73
NF1-216ENST00000495910 C18orf32Q8TCD1 76 aa4.22□□□□□ -1.73
NF1-216ENST00000495910 IGHV4OR15-8A0A075B7B6 117 aa4.22□□□□□ -1.73
NF1-216ENST00000495910 A0A087WW49 117 aa4.22□□□□□ -1.73
NF1-216ENST00000495910 IGLC7A0M8Q6 106 aa4.22□□□□□ -1.73
NF1-216ENST00000495910 LINC00271P0C7V0 271 aa4.22□□□□□ -1.73
NF1-216ENST00000495910 IGLL1P15814 213 aa4.22□□□□□ -1.73
NF1-216ENST00000495910 CCL3L1P16619 93 aa4.22□□□□□ -1.73
NF1-216ENST00000495910 NOVP48745 357 aa4.22□□□□□ -1.73
NF1-216ENST00000495910 SLC25A45Q8N413 288 aa4.22□□□□□ -1.73
NF1-216ENST00000495910 WIPF2Q8TF74 440 aaPredicted RBP4.22□□□□□ -1.73
NF1-216ENST00000495910 SPTBP11277 2137 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 151.9 ms