RNA–Protein interactions for RNA: ENST00000495680.2

SHROOM1-206, Transcript of shroom family member 1, humanhuman

TSL 3

Gene SHROOM1, Length 281 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-206ENST00000495680 V9GYH0 126 aa8.37□□□□□ -1.07
SHROOM1-206ENST00000495680 HOXA5P20719 270 aa8.36□□□□□ -1.07
SHROOM1-206ENST00000495680 FAUP35544 74 aaKnown RBP8.36□□□□□ -1.07
SHROOM1-206ENST00000495680 PLP1P60201 277 aa8.36□□□□□ -1.07
SHROOM1-206ENST00000495680 RRAS2P62070 204 aaPredicted RBP8.36□□□□□ -1.07
SHROOM1-206ENST00000495680 ID3Q02535 119 aa8.36□□□□□ -1.07
SHROOM1-206ENST00000495680 SLC38A11Q08AI6 406 aa8.36□□□□□ -1.07
SHROOM1-206ENST00000495680 PYDC2Q56P42 97 aa8.36□□□□□ -1.07
SHROOM1-206ENST00000495680 TOMM5Q8N4H5 51 aa8.36□□□□□ -1.07
SHROOM1-206ENST00000495680 RPUSD4Q96CM3 377 aaKnown RBP8.36□□□□□ -1.07
SHROOM1-206ENST00000495680 C16orf74Q96GX8 76 aa8.36□□□□□ -1.07
SHROOM1-206ENST00000495680 Q9H8V8 135 aa8.36□□□□□ -1.07
SHROOM1-206ENST00000495680 TIMM8BQ9Y5J9 83 aaPredicted RBP8.36□□□□□ -1.07
SHROOM1-206ENST00000495680 TRAV26-1A0A087WT03 109 aa8.35□□□□□ -1.07
SHROOM1-206ENST00000495680 PIGBOS1A0A0B4J2F0 54 aa8.35□□□□□ -1.07
SHROOM1-206ENST00000495680 A0A0J9YY99 117 aa8.35□□□□□ -1.07
SHROOM1-206ENST00000495680 PRAC2D3DTV9 90 aa8.35□□□□□ -1.07
SHROOM1-206ENST00000495680 H3BTX0 84 aa8.35□□□□□ -1.07
SHROOM1-206ENST00000495680 SSSCA1O60232 199 aa8.35□□□□□ -1.07
SHROOM1-206ENST00000495680 OR5I1Q13606 314 aa8.35□□□□□ -1.07
SHROOM1-206ENST00000495680 CLINT1Q14677 625 aa8.35□□□□□ -1.07
SHROOM1-206ENST00000495680 Q8N1X5 172 aa8.35□□□□□ -1.07
SHROOM1-206ENST00000495680 TMEM256Q8N2U0 113 aa8.35□□□□□ -1.07
SHROOM1-206ENST00000495680 LINC00612Q8N6U2 182 aa8.35□□□□□ -1.07
SHROOM1-206ENST00000495680 SLC25A21Q9BQT8 299 aaPredicted RBP8.35□□□□□ -1.07
SHROOM1-206ENST00000495680 ARL6Q9H0F7 186 aa8.35□□□□□ -1.07
SHROOM1-206ENST00000495680 PPP1R14DQ9NXH3 145 aa8.35□□□□□ -1.07
SHROOM1-206ENST00000495680 PSENENQ9NZ42 101 aa8.35□□□□□ -1.07
SHROOM1-206ENST00000495680 SLC17A3O00476 420 aa8.34□□□□□ -1.07
SHROOM1-206ENST00000495680 METTL15P1P0C7V9 234 aa8.34□□□□□ -1.07
SHROOM1-206ENST00000495680 CDKN1BP46527 198 aa8.34□□□□□ -1.07
SHROOM1-206ENST00000495680 ESRGQ1W209 222 aa8.34□□□□□ -1.07
SHROOM1-206ENST00000495680 GFI1BQ5VTD9 330 aa8.34□□□□□ -1.07
SHROOM1-206ENST00000495680 MORN5Q5VZ52 161 aa8.34□□□□□ -1.07
SHROOM1-206ENST00000495680 ZBTB8BQ8NAP8 495 aaPredicted RBP8.34□□□□□ -1.07
SHROOM1-206ENST00000495680 TMEM263Q8WUH6 116 aaKnown RBP8.34□□□□□ -1.07
SHROOM1-206ENST00000495680 BCL7BQ9BQE9 202 aa8.34□□□□□ -1.07
SHROOM1-206ENST00000495680 ARV1Q9H2C2 271 aa8.34□□□□□ -1.07
SHROOM1-206ENST00000495680 SCRT2Q9NQ03 307 aa8.34□□□□□ -1.07
SHROOM1-206ENST00000495680 GAGE12BA1L429 117 aa8.33□□□□□ -1.08
SHROOM1-206ENST00000495680 C9orf170A2RU37 121 aa8.33□□□□□ -1.08
SHROOM1-206ENST00000495680 ZNF701M0R085 212 aaPredicted RBP8.33□□□□□ -1.08
SHROOM1-206ENST00000495680 GAGE7O76087 117 aa8.33□□□□□ -1.08
SHROOM1-206ENST00000495680 GAGE12FP0CL80 117 aa8.33□□□□□ -1.08
SHROOM1-206ENST00000495680 GAGE12GP0CL81 117 aa8.33□□□□□ -1.08
SHROOM1-206ENST00000495680 GAGE12IP0CL82 117 aa8.33□□□□□ -1.08
SHROOM1-206ENST00000495680 ANXA7P20073 488 aaKnown RBP8.33□□□□□ -1.08
SHROOM1-206ENST00000495680 S100A7P31151 101 aa8.33□□□□□ -1.08
SHROOM1-206ENST00000495680 AP3S2P59780 193 aa8.33□□□□□ -1.08
SHROOM1-206ENST00000495680 DLK1P80370 383 aa8.33□□□□□ -1.08
SHROOM1-206ENST00000495680 ARL16Q0P5N6 197 aa8.33□□□□□ -1.08
SHROOM1-206ENST00000495680 TMEM14EPQ6UXP3 125 aa8.33□□□□□ -1.08
SHROOM1-206ENST00000495680 LRRC20Q8TCA0 184 aa8.33□□□□□ -1.08
SHROOM1-206ENST00000495680 GNPNAT1Q96EK6 184 aaPredicted RBP8.33□□□□□ -1.08
SHROOM1-206ENST00000495680 ZNF331Q9NQX6 463 aaPredicted RBP8.33□□□□□ -1.08
SHROOM1-206ENST00000495680 FLVCR2Q9UPI3 526 aa8.33□□□□□ -1.08
SHROOM1-206ENST00000495680 LINC00854A0A1B0GVQ3 168 aa8.32□□□□□ -1.08
SHROOM1-206ENST00000495680 H7BYZ3 331 aa8.32□□□□□ -1.08
SHROOM1-206ENST00000495680 J3KRW8 73 aa8.32□□□□□ -1.08
SHROOM1-206ENST00000495680 K7EPK0 472 aa8.32□□□□□ -1.08
SHROOM1-206ENST00000495680 M6PRP20645 277 aa8.32□□□□□ -1.08
SHROOM1-206ENST00000495680 FUSP35637 526 aaKnown RBP eCLIP8.32□□□□□ -1.08
SHROOM1-206ENST00000495680 SELENOTP62341 195 aa8.32□□□□□ -1.08
SHROOM1-206ENST00000495680 ZNF493Q6ZR52 646 aa8.32□□□□□ -1.08
SHROOM1-206ENST00000495680 RXFP4Q8TDU9 374 aa8.32□□□□□ -1.08
SHROOM1-206ENST00000495680 SMIM8Q96KF7 97 aa8.32□□□□□ -1.08
SHROOM1-206ENST00000495680 Q9H3A6 140 aa8.32□□□□□ -1.08
SHROOM1-206ENST00000495680 HERC1Q15751 4861 aa8.32□□□□□ -1.08
SHROOM1-206ENST00000495680 H3BQ15 152 aa8.31□□□□□ -1.08
SHROOM1-206ENST00000495680 SCGB1D2O95969 90 aa8.31□□□□□ -1.08
SHROOM1-206ENST00000495680 LCN15Q6UWW0 184 aa8.31□□□□□ -1.08
SHROOM1-206ENST00000495680 LINC00305Q7Z4B0 112 aa8.31□□□□□ -1.08
SHROOM1-206ENST00000495680 CCDC190Q86UF4 302 aa8.31□□□□□ -1.08
SHROOM1-206ENST00000495680 TMEM37Q8WXS4 190 aa8.31□□□□□ -1.08
SHROOM1-206ENST00000495680 UPK3BQ9BT76 320 aa8.31□□□□□ -1.08
SHROOM1-206ENST00000495680 TMPRSS5Q9H3S3 457 aa8.31□□□□□ -1.08
SHROOM1-206ENST00000495680 NPVFQ9HCQ7 196 aa8.31□□□□□ -1.08
SHROOM1-206ENST00000495680 ZNF586Q9NXT0 402 aa8.31□□□□□ -1.08
SHROOM1-206ENST00000495680 RCL1Q9Y2P8 373 aaKnown RBP8.31□□□□□ -1.08
SHROOM1-206ENST00000495680 FAT1Q14517 4588 aa8.31□□□□□ -1.08
SHROOM1-206ENST00000495680 AGPAT2O15120 278 aa8.3□□□□□ -1.08
SHROOM1-206ENST00000495680 CT45A10P0DMU9 189 aa8.3□□□□□ -1.08
SHROOM1-206ENST00000495680 IGLC2P0DOY2 106 aa8.3□□□□□ -1.08
SHROOM1-206ENST00000495680 UBE2MP61081 183 aaKnown RBP8.3□□□□□ -1.08
SHROOM1-206ENST00000495680 OPCMLQ14982 345 aa8.3□□□□□ -1.08
SHROOM1-206ENST00000495680 TEPPQ6URK8 271 aa8.3□□□□□ -1.08
SHROOM1-206ENST00000495680 Q6ZTI0 123 aa8.3□□□□□ -1.08
SHROOM1-206ENST00000495680 OR10J6PQ8NGY7 276 aa8.3□□□□□ -1.08
SHROOM1-206ENST00000495680 ZNF503Q96F45 646 aa8.3□□□□□ -1.08
SHROOM1-206ENST00000495680 VSIG2Q96IQ7 327 aa8.3□□□□□ -1.08
SHROOM1-206ENST00000495680 MGST2Q99735 147 aa8.3□□□□□ -1.08
SHROOM1-206ENST00000495680 TRAV5A0A0B4J249 113 aa8.29□□□□□ -1.08
SHROOM1-206ENST00000495680 TRAV12-3A0A0B4J271 114 aa8.29□□□□□ -1.08
SHROOM1-206ENST00000495680 FNDC10F2Z333 226 aa8.29□□□□□ -1.08
SHROOM1-206ENST00000495680 GOSR2O14653 212 aa8.29□□□□□ -1.08
SHROOM1-206ENST00000495680 NOL3O60936 208 aaKnown RBP8.29□□□□□ -1.08
SHROOM1-206ENST00000495680 NDUFB6O95139 128 aa8.29□□□□□ -1.08
SHROOM1-206ENST00000495680 RLN2P04090 185 aa8.29□□□□□ -1.08
SHROOM1-206ENST00000495680 CXCL2P19875 107 aa8.29□□□□□ -1.08
SHROOM1-206ENST00000495680 BAK1Q16611 211 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms