RNA–Protein interactions for RNA: ENST00000495485.1

HDAC3-214, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 797 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-214ENST00000495485 GGTLC3B5MD39 225 aa7.95□□□□□ -1.14
HDAC3-214ENST00000495485 IGLV1-40P01703 118 aa7.95□□□□□ -1.14
HDAC3-214ENST00000495485 ELANEP08246 267 aa7.95□□□□□ -1.14
HDAC3-214ENST00000495485 FOLR2P14207 255 aa7.95□□□□□ -1.14
HDAC3-214ENST00000495485 USF2Q15853 346 aaPredicted RBP7.95□□□□□ -1.14
HDAC3-214ENST00000495485 TEX38Q6PEX7 206 aa7.95□□□□□ -1.14
HDAC3-214ENST00000495485 TOMM20LQ6UXN7 152 aa7.95□□□□□ -1.14
HDAC3-214ENST00000495485 FAM24BQ8N5W8 94 aa7.95□□□□□ -1.14
HDAC3-214ENST00000495485 OR10G8Q8NGN5 311 aa7.95□□□□□ -1.14
HDAC3-214ENST00000495485 SPATA3Q8NHX4 192 aa7.95□□□□□ -1.14
HDAC3-214ENST00000495485 C2CD4CQ8TF44 421 aa7.95□□□□□ -1.14
HDAC3-214ENST00000495485 ISOC2Q96AB3 205 aa7.95□□□□□ -1.14
HDAC3-214ENST00000495485 SFRP2Q96HF1 295 aa7.95□□□□□ -1.14
HDAC3-214ENST00000495485 CCDC140Q96MF4 163 aa7.95□□□□□ -1.14
HDAC3-214ENST00000495485 LINC00527Q9UJ94 153 aa7.95□□□□□ -1.14
HDAC3-214ENST00000495485 SOX21Q9Y651 276 aaPredicted RBP7.95□□□□□ -1.14
HDAC3-214ENST00000495485 TRAV9-1A0A075B6T8 112 aa7.94□□□□□ -1.14
HDAC3-214ENST00000495485 FAM181BA6NEQ2 426 aa7.94□□□□□ -1.14
HDAC3-214ENST00000495485 GGCTO75223 188 aaKnown RBP7.94□□□□□ -1.14
HDAC3-214ENST00000495485 IGHG4P01861 327 aa7.94□□□□□ -1.14
HDAC3-214ENST00000495485 RAB5AP20339 215 aa7.94□□□□□ -1.14
HDAC3-214ENST00000495485 ADMP35318 185 aa7.94□□□□□ -1.14
HDAC3-214ENST00000495485 MYCNOSP40205 109 aa7.94□□□□□ -1.14
HDAC3-214ENST00000495485 TMEM183BQ1AE95 376 aa7.94□□□□□ -1.14
HDAC3-214ENST00000495485 FAM106AQ4KMX7 169 aa7.94□□□□□ -1.14
HDAC3-214ENST00000495485 LEMD1Q68G75 181 aa7.94□□□□□ -1.14
HDAC3-214ENST00000495485 OCC1Q8TAD7 63 aa7.94□□□□□ -1.14
HDAC3-214ENST00000495485 NOL4LQ96MY1 436 aaPredicted RBP7.94□□□□□ -1.14
HDAC3-214ENST00000495485 SLC50A1Q9BRV3 221 aa7.94□□□□□ -1.14
HDAC3-214ENST00000495485 C16orf95Q9H693 158 aa7.94□□□□□ -1.14
HDAC3-214ENST00000495485 ZNF586Q9NXT0 402 aa7.94□□□□□ -1.14
HDAC3-214ENST00000495485 ZNF785A8K8V0 405 aa7.93□□□□□ -1.14
HDAC3-214ENST00000495485 IGLC2P0DOY2 106 aa7.93□□□□□ -1.14
HDAC3-214ENST00000495485 ERVFC1-1P60608 527 aa7.93□□□□□ -1.14
HDAC3-214ENST00000495485 FOXE3Q13461 319 aa7.93□□□□□ -1.14
HDAC3-214ENST00000495485 ELOBQ15370 118 aa7.93□□□□□ -1.14
HDAC3-214ENST00000495485 KRTAP24-1Q3LI83 254 aa7.93□□□□□ -1.14
HDAC3-214ENST00000495485 CENPWQ5EE01 88 aa7.93□□□□□ -1.14
HDAC3-214ENST00000495485 BAGE2Q86Y30 109 aa7.93□□□□□ -1.14
HDAC3-214ENST00000495485 OR4X2Q8NGF9 303 aa7.93□□□□□ -1.14
HDAC3-214ENST00000495485 ZNF414Q96IQ9 312 aa7.93□□□□□ -1.14
HDAC3-214ENST00000495485 DERL1Q9BUN8 251 aa7.93□□□□□ -1.14
HDAC3-214ENST00000495485 ZFAND3Q9H8U3 227 aa7.93□□□□□ -1.14
HDAC3-214ENST00000495485 OSTCQ9NRP0 149 aa7.93□□□□□ -1.14
HDAC3-214ENST00000495485 PEF1Q9UBV8 284 aaKnown RBP7.93□□□□□ -1.14
HDAC3-214ENST00000495485 TRBV24-1A0A075B6N3 115 aa7.92□□□□□ -1.14
HDAC3-214ENST00000495485 A0A087X0K7 114 aa7.92□□□□□ -1.14
HDAC3-214ENST00000495485 TRBV6-1A0A0K0K1D8 114 aa7.92□□□□□ -1.14
HDAC3-214ENST00000495485 CLPSL1A2RUU4 121 aa7.92□□□□□ -1.14
HDAC3-214ENST00000495485 ISLRO14498 428 aa7.92□□□□□ -1.14
HDAC3-214ENST00000495485 GCGP01275 180 aa7.92□□□□□ -1.14
HDAC3-214ENST00000495485 TCRAP04437 139 aa7.92□□□□□ -1.14
HDAC3-214ENST00000495485 MGST1P10620 155 aaKnown RBP7.92□□□□□ -1.14
HDAC3-214ENST00000495485 RPS10P46783 165 aaKnown RBP7.92□□□□□ -1.14
HDAC3-214ENST00000495485 FLI1Q01543 452 aaPredicted RBP7.92□□□□□ -1.14
HDAC3-214ENST00000495485 CFHR3Q02985 330 aa7.92□□□□□ -1.14
HDAC3-214ENST00000495485 COX19Q49B96 90 aa7.92□□□□□ -1.14
HDAC3-214ENST00000495485 Q8N2B8 174 aa7.92□□□□□ -1.14
HDAC3-214ENST00000495485 DAZAP1Q96EP5 407 aaKnown RBP7.92□□□□□ -1.14
HDAC3-214ENST00000495485 ZFP30Q9Y2G7 519 aa7.92□□□□□ -1.14
HDAC3-214ENST00000495485 KLF12Q9Y4X4 402 aa7.92□□□□□ -1.14
HDAC3-214ENST00000495485 URGCP-MRPS24S4R325 110 aa7.92□□□□□ -1.14
HDAC3-214ENST00000495485 WNK1Q9H4A3 2382 aa7.91□□□□□ -1.14
HDAC3-214ENST00000495485 PPP5D1E7EU14 171 aa7.91□□□□□ -1.14
HDAC3-214ENST00000495485 K7EMT4 169 aa7.91□□□□□ -1.14
HDAC3-214ENST00000495485 BUB3O43684 328 aa7.91□□□□□ -1.14
HDAC3-214ENST00000495485 PSMB8P28062 276 aa7.91□□□□□ -1.14
HDAC3-214ENST00000495485 RPEL1Q2QD12 228 aa7.91□□□□□ -1.14
HDAC3-214ENST00000495485 IBA57Q5T440 356 aaKnown RBP7.91□□□□□ -1.14
HDAC3-214ENST00000495485 SAMD13Q5VXD3 122 aa7.91□□□□□ -1.14
HDAC3-214ENST00000495485 FAM231DQ6ZW35 169 aa7.91□□□□□ -1.14
HDAC3-214ENST00000495485 C1QL4Q86Z23 238 aa7.91□□□□□ -1.14
HDAC3-214ENST00000495485 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.91□□□□□ -1.14
HDAC3-214ENST00000495485 TMEM75Q8N9X5 138 aa7.91□□□□□ -1.14
HDAC3-214ENST00000495485 FAM210BQ96KR6 192 aa7.91□□□□□ -1.14
HDAC3-214ENST00000495485 DUX5Q96PT3 197 aa7.91□□□□□ -1.14
HDAC3-214ENST00000495485 RPH3ALQ9UNE2 315 aa7.91□□□□□ -1.14
HDAC3-214ENST00000495485 UFC1Q9Y3C8 167 aa7.91□□□□□ -1.14
HDAC3-214ENST00000495485 TRBV20OR9-2A0A075B6H5 130 aa7.9□□□□□ -1.14
HDAC3-214ENST00000495485 MRPS12O15235 138 aaKnown RBP7.9□□□□□ -1.14
HDAC3-214ENST00000495485 S100A6P06703 90 aa7.9□□□□□ -1.14
HDAC3-214ENST00000495485 PFN1P07737 140 aaKnown RBP7.9□□□□□ -1.14
HDAC3-214ENST00000495485 C12orf54Q6X4T0 127 aa7.9□□□□□ -1.14
HDAC3-214ENST00000495485 SIGLEC15Q6ZMC9 328 aa7.9□□□□□ -1.14
HDAC3-214ENST00000495485 GPHB5Q86YW7 130 aa7.9□□□□□ -1.14
HDAC3-214ENST00000495485 IGF2BP2-AS1Q96M15 143 aa7.9□□□□□ -1.14
HDAC3-214ENST00000495485 ZNF702PQ9H963 129 aa7.9□□□□□ -1.14
HDAC3-214ENST00000495485 IL36BQ9NZH7 164 aa7.9□□□□□ -1.14
HDAC3-214ENST00000495485 IGHV3-35A0A0C4DH35 117 aa7.89□□□□□ -1.15
HDAC3-214ENST00000495485 ZNF705GA8MUZ8 300 aaPredicted RBP7.89□□□□□ -1.15
HDAC3-214ENST00000495485 GATCO43716 136 aaKnown RBP7.89□□□□□ -1.15
HDAC3-214ENST00000495485 LTAP01374 205 aa7.89□□□□□ -1.15
HDAC3-214ENST00000495485 FAM3BP58499 235 aaPredicted RBP7.89□□□□□ -1.15
HDAC3-214ENST00000495485 PSG3Q16557 428 aa7.89□□□□□ -1.15
HDAC3-214ENST00000495485 SAPCD1Q5SSQ6 148 aa7.89□□□□□ -1.15
HDAC3-214ENST00000495485 C16orf54Q6UWD8 224 aa7.89□□□□□ -1.15
HDAC3-214ENST00000495485 Q6ZSV7 163 aa7.89□□□□□ -1.15
HDAC3-214ENST00000495485 EXOC3-AS1Q8N2X6 119 aa7.89□□□□□ -1.15
HDAC3-214ENST00000495485 WFDC12Q8WWY7 111 aa7.89□□□□□ -1.15
HDAC3-214ENST00000495485 MRPL53Q96EL3 112 aaKnown RBP7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms