RNA–Protein interactions for RNA: ENST00000494973.1

APTX-231, Transcript of aprataxin, human

TSL 4

Gene APTX, Length 547 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APTX-231	ENST00000494973	PMS2P11	Q13670	270 aa		10.24	□□□□□ -0.77
APTX-231	ENST00000494973	CLLU1	Q5K131	121 aa		10.24	□□□□□ -0.77
APTX-231	ENST00000494973	LYPD6B	Q8NI32	183 aa		10.24	□□□□□ -0.77
APTX-231	ENST00000494973	SUN5	Q8TC36	379 aa		10.24	□□□□□ -0.77
APTX-231	ENST00000494973	FXYD5	Q96DB9	178 aa		10.24	□□□□□ -0.77
APTX-231	ENST00000494973	TXNDC17	Q9BRA2	123 aa		10.24	□□□□□ -0.77
APTX-231	ENST00000494973	AAMDC	Q9H7C9	122 aa		10.24	□□□□□ -0.77
APTX-231	ENST00000494973	TRBV19	A0A075B6N1	114 aa		10.23	□□□□□ -0.77
APTX-231	ENST00000494973	ISLR	O14498	428 aa		10.23	□□□□□ -0.77
APTX-231	ENST00000494973	WIPF1	O43516	503 aa		10.23	□□□□□ -0.77
APTX-231	ENST00000494973	NMB	P08949	121 aa		10.23	□□□□□ -0.77
APTX-231	ENST00000494973	OR10J4	P0C629	311 aa		10.23	□□□□□ -0.77
APTX-231	ENST00000494973	PYY	P10082	97 aa		10.23	□□□□□ -0.77
APTX-231	ENST00000494973	FGF8	P55075	233 aa	Predicted RBP	10.23	□□□□□ -0.77
APTX-231	ENST00000494973	ADAMTSL5	Q6ZMM2	481 aa		10.23	□□□□□ -0.77
APTX-231	ENST00000494973	SSX7	Q7RTT5	188 aa		10.23	□□□□□ -0.77
APTX-231	ENST00000494973	TCEAL7	Q9BRU2	100 aa		10.23	□□□□□ -0.77
APTX-231	ENST00000494973	PRELID1	Q9Y255	219 aa		10.23	□□□□□ -0.77
APTX-231	ENST00000494973		A0A1W2PRE2	83 aa		10.22	□□□□□ -0.77
APTX-231	ENST00000494973	SNRPD3	P62318	126 aa	Known RBP	10.22	□□□□□ -0.77
APTX-231	ENST00000494973	CD300E	Q496F6	205 aa	Predicted RBP	10.22	□□□□□ -0.77
APTX-231	ENST00000494973	TMEM61	Q8N0U2	210 aa		10.22	□□□□□ -0.77
APTX-231	ENST00000494973	ZNF503	Q96F45	646 aa		10.22	□□□□□ -0.77
APTX-231	ENST00000494973	C16orf92	Q96LL3	132 aa		10.22	□□□□□ -0.77
APTX-231	ENST00000494973	EDN2	P20800	178 aa		10.21	□□□□□ -0.77
APTX-231	ENST00000494973	UNQ5830/PRO19650/PRO19816	Q6UY13	95 aa		10.21	□□□□□ -0.77
APTX-231	ENST00000494973	ARL6IP6	Q8N6S5	226 aa		10.21	□□□□□ -0.77
APTX-231	ENST00000494973	BLNK	Q8WV28	456 aa		10.21	□□□□□ -0.77
APTX-231	ENST00000494973	MRPL53	Q96EL3	112 aa	Known RBP	10.21	□□□□□ -0.77
APTX-231	ENST00000494973	MS4A6A	Q9H2W1	248 aa		10.21	□□□□□ -0.77
APTX-231	ENST00000494973	ZNF586	Q9NXT0	402 aa		10.21	□□□□□ -0.77
APTX-231	ENST00000494973		H3BQ15	152 aa		10.2	□□□□□ -0.78
APTX-231	ENST00000494973	CSN1S1	P47710	185 aa		10.2	□□□□□ -0.78
APTX-231	ENST00000494973	CMTM2	Q8TAZ6	248 aa		10.2	□□□□□ -0.78
APTX-231	ENST00000494973	RXFP4	Q8TDU9	374 aa		10.2	□□□□□ -0.78
APTX-231	ENST00000494973	ZNF331	Q9NQX6	463 aa	Predicted RBP	10.2	□□□□□ -0.78
APTX-231	ENST00000494973	OTOR	Q9NRC9	128 aa		10.2	□□□□□ -0.78
APTX-231	ENST00000494973	GNG13	Q9P2W3	67 aa		10.2	□□□□□ -0.78
APTX-231	ENST00000494973	SMAD5-AS1	Q9Y6J3	95 aa		10.2	□□□□□ -0.78
APTX-231	ENST00000494973		A0A1B0GV50	99 aa		10.19	□□□□□ -0.78
APTX-231	ENST00000494973	SERTM2	A0A1B0GWG4	89 aa		10.19	□□□□□ -0.78
APTX-231	ENST00000494973		K7EQG2	157 aa		10.19	□□□□□ -0.78
APTX-231	ENST00000494973	NDUFS6	O75380	124 aa	Known RBP	10.19	□□□□□ -0.78
APTX-231	ENST00000494973	BCL2	P10415	239 aa		10.19	□□□□□ -0.78
APTX-231	ENST00000494973	GUCA2B	Q16661	112 aa		10.19	□□□□□ -0.78
APTX-231	ENST00000494973	DCANP1	Q8TF63	244 aa		10.19	□□□□□ -0.78
APTX-231	ENST00000494973	FAM110A	Q9BQ89	295 aa		10.19	□□□□□ -0.78
APTX-231	ENST00000494973	SMDT1	Q9H4I9	107 aa		10.19	□□□□□ -0.78
APTX-231	ENST00000494973	VAX2	Q9UIW0	290 aa		10.19	□□□□□ -0.78
APTX-231	ENST00000494973	IGKV3-7	A0A075B6H7	116 aa		10.18	□□□□□ -0.78
APTX-231	ENST00000494973		F6UZH7	168 aa		10.18	□□□□□ -0.78
APTX-231	ENST00000494973	SOCS3	O14543	225 aa		10.18	□□□□□ -0.78
APTX-231	ENST00000494973	EIF3G	O75821	320 aa	Known RBP eCLIP	10.18	□□□□□ -0.78
APTX-231	ENST00000494973	IGLL1	P15814	213 aa		10.18	□□□□□ -0.78
APTX-231	ENST00000494973	RAN	P62826	216 aa	Known RBP	10.18	□□□□□ -0.78
APTX-231	ENST00000494973	GTSCR1	Q86UQ5	136 aa		10.18	□□□□□ -0.78
APTX-231	ENST00000494973	GBGT1	Q8N5D6	347 aa		10.18	□□□□□ -0.78
APTX-231	ENST00000494973	C5orf17	Q8NAS9	161 aa		10.18	□□□□□ -0.78
APTX-231	ENST00000494973		Q9H3A6	140 aa		10.18	□□□□□ -0.78
APTX-231	ENST00000494973	MED9	Q9NWA0	146 aa		10.18	□□□□□ -0.78
APTX-231	ENST00000494973	FAM74A7	A6NL05	159 aa		10.17	□□□□□ -0.78
APTX-231	ENST00000494973		K7EQM0	130 aa		10.17	□□□□□ -0.78
APTX-231	ENST00000494973	PDE6D	O43924	150 aa		10.17	□□□□□ -0.78
APTX-231	ENST00000494973	NDUFB4	O95168	129 aa		10.17	□□□□□ -0.78
APTX-231	ENST00000494973	MEF2B	Q02080	365 aa	Predicted RBP	10.17	□□□□□ -0.78
APTX-231	ENST00000494973	CST9LP1	Q5W188	147 aa		10.17	□□□□□ -0.78
APTX-231	ENST00000494973	FAM210A	Q96ND0	272 aa		10.17	□□□□□ -0.78
APTX-231	ENST00000494973	TMPRSS5	Q9H3S3	457 aa		10.17	□□□□□ -0.78
APTX-231	ENST00000494973	ANK2	Q01484	3957 aa		10.16	□□□□□ -0.78
APTX-231	ENST00000494973	RAB19	A4D1S5	217 aa		10.16	□□□□□ -0.78
APTX-231	ENST00000494973	RBFOX3	A6NFN3	312 aa		10.16	□□□□□ -0.78
APTX-231	ENST00000494973	FBLL1	A6NHQ2	334 aa	Known RBP	10.16	□□□□□ -0.78
APTX-231	ENST00000494973	C11orf94	C9JXX5	98 aa		10.16	□□□□□ -0.78
APTX-231	ENST00000494973	SLC17A3	O00476	420 aa		10.16	□□□□□ -0.78
APTX-231	ENST00000494973	PAGE4	O60829	102 aa		10.16	□□□□□ -0.78
APTX-231	ENST00000494973	TFPI2	P48307	235 aa		10.16	□□□□□ -0.78
APTX-231	ENST00000494973	UBE2G2	P60604	165 aa		10.16	□□□□□ -0.78
APTX-231	ENST00000494973	ICAM4	Q14773	271 aa		10.16	□□□□□ -0.78
APTX-231	ENST00000494973	PEA15	Q15121	130 aa		10.16	□□□□□ -0.78
APTX-231	ENST00000494973	WFDC3	Q8IUB2	231 aa		10.16	□□□□□ -0.78
APTX-231	ENST00000494973	HIST1H2BA	Q96A08	127 aa		10.16	□□□□□ -0.78
APTX-231	ENST00000494973	RPUSD4	Q96CM3	377 aa	Known RBP	10.16	□□□□□ -0.78
APTX-231	ENST00000494973	LOC102723971	A0A1B0GUV8	181 aa		10.15	□□□□□ -0.78
APTX-231	ENST00000494973	PGP	A6NDG6	321 aa		10.15	□□□□□ -0.78
APTX-231	ENST00000494973		H3BTX0	84 aa		10.15	□□□□□ -0.78
APTX-231	ENST00000494973	SLC25A5	P05141	298 aa	Known RBP	10.15	□□□□□ -0.78
APTX-231	ENST00000494973	CCL20	P78556	96 aa		10.15	□□□□□ -0.78
APTX-231	ENST00000494973	PSG3	Q16557	428 aa		10.15	□□□□□ -0.78
APTX-231	ENST00000494973	BEAN1	Q3B7T3	259 aa		10.15	□□□□□ -0.78
APTX-231	ENST00000494973	ZNF506	Q5JVG8	444 aa		10.15	□□□□□ -0.78
APTX-231	ENST00000494973	ZNF738	Q8NE65	137 aa		10.15	□□□□□ -0.78
APTX-231	ENST00000494973	C17orf77	Q96MU5	243 aa		10.15	□□□□□ -0.78
APTX-231	ENST00000494973	EIF5A2	Q9GZV4	153 aa	Known RBP	10.15	□□□□□ -0.78
APTX-231	ENST00000494973	ZNF256	Q9Y2P7	627 aa	Predicted RBP	10.15	□□□□□ -0.78
APTX-231	ENST00000494973	TRAV8-2	A0A0B4J237	113 aa		10.14	□□□□□ -0.79
APTX-231	ENST00000494973	RBAKDN	A6NC62	111 aa		10.14	□□□□□ -0.79
APTX-231	ENST00000494973	OR11H12	B2RN74	326 aa		10.14	□□□□□ -0.79
APTX-231	ENST00000494973	GGTLC3	B5MD39	225 aa		10.14	□□□□□ -0.79
APTX-231	ENST00000494973	ZNF688	P0C7X2	276 aa		10.14	□□□□□ -0.79
APTX-231	ENST00000494973	SUMO1	P63165	101 aa	Known RBP	10.14	□□□□□ -0.79

Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms