RNA–Protein interactions for RNA: ENST00000494815.1

TSPAN4-212, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 2,187 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-212ENST00000494815 IGLV11-55A0A075B6I3 123 aa14.56□□□□□ -0.08
TSPAN4-212ENST00000494815 GGTLC3B5MD39 225 aa14.56□□□□□ -0.08
TSPAN4-212ENST00000494815 HYPMO75409 117 aa14.56□□□□□ -0.08
TSPAN4-212ENST00000494815 C8orf88P0DMB2 117 aa14.56□□□□□ -0.08
TSPAN4-212ENST00000494815 EGR2P11161 476 aaPredicted RBP14.56□□□□□ -0.08
TSPAN4-212ENST00000494815 RNF151Q2KHN1 245 aa14.56□□□□□ -0.08
TSPAN4-212ENST00000494815 MRPL54Q6P161 138 aaKnown RBP14.56□□□□□ -0.08
TSPAN4-212ENST00000494815 J3QLI3 93 aa14.56□□□□□ -0.08
TSPAN4-212ENST00000494815 IGLC1P0CG04 106 aa14.56□□□□□ -0.08
TSPAN4-212ENST00000494815 C10orf113Q5VZT2 155 aa14.56□□□□□ -0.08
TSPAN4-212ENST00000494815 ORAOV1Q8WV07 137 aa14.56□□□□□ -0.08
TSPAN4-212ENST00000494815 FANCD2OSQ96PS1 177 aa14.56□□□□□ -0.08
TSPAN4-212ENST00000494815 SVEP1Q4LDE5 3571 aa14.55□□□□□ -0.08
TSPAN4-212ENST00000494815 IZUMO1RA6ND01 250 aa14.55□□□□□ -0.08
TSPAN4-212ENST00000494815 OR7C2O60412 319 aa14.55□□□□□ -0.08
TSPAN4-212ENST00000494815 C5orf56Q8N8D9 126 aa14.55□□□□□ -0.08
TSPAN4-212ENST00000494815 PIFOQ8TCI5 191 aa14.55□□□□□ -0.08
TSPAN4-212ENST00000494815 TSKUQ8WUA8 353 aa14.55□□□□□ -0.08
TSPAN4-212ENST00000494815 MBD6Q96DN6 1003 aa14.55□□□□□ -0.08
TSPAN4-212ENST00000494815 TXN2Q99757 166 aa14.55□□□□□ -0.08
TSPAN4-212ENST00000494815 ALKBH7Q9BT30 221 aaPredicted RBP14.55□□□□□ -0.08
TSPAN4-212ENST00000494815 MOB4Q9Y3A3 225 aa14.55□□□□□ -0.08
TSPAN4-212ENST00000494815 MAP1AP78559 2803 aaPredicted RBP14.55□□□□□ -0.08
TSPAN4-212ENST00000494815 A0A1W2PRE2 83 aa14.54□□□□□ -0.08
TSPAN4-212ENST00000494815 APCSP02743 223 aa14.54□□□□□ -0.08
TSPAN4-212ENST00000494815 HNRNPA3P51991 378 aaKnown RBP14.54□□□□□ -0.08
TSPAN4-212ENST00000494815 PLP1P60201 277 aa14.54□□□□□ -0.08
TSPAN4-212ENST00000494815 KLF17Q5JT82 389 aaPredicted RBP14.54□□□□□ -0.08
TSPAN4-212ENST00000494815 Q6ZN92 141 aa14.54□□□□□ -0.08
TSPAN4-212ENST00000494815 KLHDC1Q8N7A1 406 aa14.54□□□□□ -0.08
TSPAN4-212ENST00000494815 STPG4Q8N801 248 aa14.54□□□□□ -0.08
TSPAN4-212ENST00000494815 THYN1Q9P016 225 aa14.54□□□□□ -0.08
TSPAN4-212ENST00000494815 MRPL27Q9P0M9 148 aaKnown RBP14.54□□□□□ -0.08
TSPAN4-212ENST00000494815 CSMD2Q7Z408 3487 aa14.54□□□□□ -0.08
TSPAN4-212ENST00000494815 MGST1P10620 155 aaKnown RBP14.54□□□□□ -0.08
TSPAN4-212ENST00000494815 Q5PR19 223 aa14.54□□□□□ -0.08
TSPAN4-212ENST00000494815 PATE2Q6UY27 113 aa14.54□□□□□ -0.08
TSPAN4-212ENST00000494815 LAMTOR2Q9Y2Q5 125 aa14.54□□□□□ -0.08
TSPAN4-212ENST00000494815 BORCS7Q96B45 105 aa14.53□□□□□ -0.08
TSPAN4-212ENST00000494815 ZNF48Q96MX3 618 aaPredicted RBP14.53□□□□□ -0.08
TSPAN4-212ENST00000494815 SERTAD4Q9NUC0 356 aa14.53□□□□□ -0.08
TSPAN4-212ENST00000494815 TMEM238C9JI98 176 aa14.53□□□□□ -0.08
TSPAN4-212ENST00000494815 AVPP01185 164 aa14.53□□□□□ -0.08
TSPAN4-212ENST00000494815 PRSS57Q6UWY2 283 aa14.53□□□□□ -0.08
TSPAN4-212ENST00000494815 FAM110DQ8TAY7 271 aaPredicted RBP14.53□□□□□ -0.08
TSPAN4-212ENST00000494815 WIPF2Q8TF74 440 aaPredicted RBP14.53□□□□□ -0.08
TSPAN4-212ENST00000494815 FAM167A-AS1Q96KT0 104 aa14.53□□□□□ -0.08
TSPAN4-212ENST00000494815 PSMG3-AS1Q96PY0 264 aa14.53□□□□□ -0.08
TSPAN4-212ENST00000494815 RNF223E7ERA6 249 aa14.52□□□□□ -0.08
TSPAN4-212ENST00000494815 KLK9Q2XQG4 91 aa14.52□□□□□ -0.08
TSPAN4-212ENST00000494815 RASL11AQ6T310 242 aa14.52□□□□□ -0.08
TSPAN4-212ENST00000494815 FAM19A2Q8N3H0 131 aa14.52□□□□□ -0.08
TSPAN4-212ENST00000494815 C18orf32Q8TCD1 76 aa14.52□□□□□ -0.08
TSPAN4-212ENST00000494815 SLC25A2Q9BXI2 301 aa14.52□□□□□ -0.08
TSPAN4-212ENST00000494815 ZNF331Q9NQX6 463 aaPredicted RBP14.52□□□□□ -0.08
TSPAN4-212ENST00000494815 ZNF355PQ9NSJ1 428 aa14.52□□□□□ -0.08
TSPAN4-212ENST00000494815 KLK9Q9UKQ9 250 aa14.52□□□□□ -0.08
TSPAN4-212ENST00000494815 TENM4Q6N022 2769 aa14.52□□□□□ -0.09
TSPAN4-212ENST00000494815 DOPEY2Q9Y3R5 2298 aa14.52□□□□□ -0.09
TSPAN4-212ENST00000494815 CBY3A6NI87 242 aa14.51□□□□□ -0.09
TSPAN4-212ENST00000494815 ATP6V0E1O15342 81 aa14.51□□□□□ -0.09
TSPAN4-212ENST00000494815 TOMM40O96008 361 aa14.51□□□□□ -0.09
TSPAN4-212ENST00000494815 IGKV1-17P01599 117 aa14.51□□□□□ -0.09
TSPAN4-212ENST00000494815 TRAV30A0A087WSZ9 112 aa14.51□□□□□ -0.09
TSPAN4-212ENST00000494815 ORM2P19652 201 aa14.51□□□□□ -0.09
TSPAN4-212ENST00000494815 SLAQ13239 276 aa14.51□□□□□ -0.09
TSPAN4-212ENST00000494815 UBE2V1Q13404 147 aa14.51□□□□□ -0.09
TSPAN4-212ENST00000494815 MORN5Q5VZ52 161 aa14.51□□□□□ -0.09
TSPAN4-212ENST00000494815 LINC00305Q7Z4B0 112 aa14.51□□□□□ -0.09
TSPAN4-212ENST00000494815 TMEM219Q86XT9 240 aa14.51□□□□□ -0.09
TSPAN4-212ENST00000494815 OR1B1Q8NGR6 318 aa14.51□□□□□ -0.09
TSPAN4-212ENST00000494815 TMUB1Q9BVT8 246 aa14.51□□□□□ -0.09
TSPAN4-212ENST00000494815 TGFAP01135 160 aa14.5□□□□□ -0.09
TSPAN4-212ENST00000494815 PSG1P11464 419 aa14.5□□□□□ -0.09
TSPAN4-212ENST00000494815 NTF3P20783 257 aa14.5□□□□□ -0.09
TSPAN4-212ENST00000494815 MFAP4P55083 255 aa14.5□□□□□ -0.09
TSPAN4-212ENST00000494815 PMCHL1Q16048 86 aa14.5□□□□□ -0.09
TSPAN4-212ENST00000494815 UNQ5815/PRO19632Q6UWF5 114 aa14.5□□□□□ -0.09
TSPAN4-212ENST00000494815 STXBP6Q8NFX7 210 aa14.5□□□□□ -0.09
TSPAN4-212ENST00000494815 CA1P00915 261 aaPredicted RBP14.49□□□□□ -0.09
TSPAN4-212ENST00000494815 MRPS16Q9Y3D3 137 aaKnown RBP14.49□□□□□ -0.09
TSPAN4-212ENST00000494815 TRAV5A0A0B4J249 113 aa14.49□□□□□ -0.09
TSPAN4-212ENST00000494815 A6NDX4 124 aa14.49□□□□□ -0.09
TSPAN4-212ENST00000494815 S100A7P31151 101 aa14.49□□□□□ -0.09
TSPAN4-212ENST00000494815 UBE2L3P68036 154 aaKnown RBP14.49□□□□□ -0.09
TSPAN4-212ENST00000494815 ECSCRQ19T08 205 aa14.49□□□□□ -0.09
TSPAN4-212ENST00000494815 FAM231DQ6ZW35 169 aa14.49□□□□□ -0.09
TSPAN4-212ENST00000494815 CSTL1Q9H114 145 aa14.49□□□□□ -0.09
TSPAN4-212ENST00000494815 C21orf62Q9NYP8 219 aa14.49□□□□□ -0.09
TSPAN4-212ENST00000494815 RPH3ALQ9UNE2 315 aa14.49□□□□□ -0.09
TSPAN4-212ENST00000494815 CREBBPQ92793 2442 aa14.48□□□□□ -0.09
TSPAN4-212ENST00000494815 APCP25054 2843 aa14.48□□□□□ -0.09
TSPAN4-212ENST00000494815 H3BUX3 64 aa14.48□□□□□ -0.09
TSPAN4-212ENST00000494815 GNG7O60262 68 aa14.48□□□□□ -0.09
TSPAN4-212ENST00000494815 IGHV4-31P0DP07 118 aa14.48□□□□□ -0.09
TSPAN4-212ENST00000494815 TSPOP30536 169 aa14.48□□□□□ -0.09
TSPAN4-212ENST00000494815 NHLRC2Q8NBF2 726 aa14.48□□□□□ -0.09
TSPAN4-212ENST00000494815 MAPK1IP1LQ8NDC0 245 aa14.48□□□□□ -0.09
TSPAN4-212ENST00000494815 PAXXQ9BUH6 204 aa14.48□□□□□ -0.09
TSPAN4-212ENST00000494815 OR2J3O76001 311 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms