RNA–Protein interactions for RNA: ENST00000494123.5

BRCA1-223, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-223ENST00000494123 UBE2L3P68036 154 aaKnown RBP10.86□□□□□ -0.67
BRCA1-223ENST00000494123 GUK1Q16774 197 aa10.86□□□□□ -0.67
BRCA1-223ENST00000494123 ODF3L2Q3SX64 289 aa10.86□□□□□ -0.67
BRCA1-223ENST00000494123 PSMG4Q5JS54 123 aa10.86□□□□□ -0.67
BRCA1-223ENST00000494123 Q8N1Y9 231 aa10.86□□□□□ -0.67
BRCA1-223ENST00000494123 RAB24Q969Q5 203 aa10.86□□□□□ -0.67
BRCA1-223ENST00000494123 LINC00052Q96N35 136 aa10.86□□□□□ -0.67
BRCA1-223ENST00000494123 BOLA1Q9Y3E2 137 aa10.86□□□□□ -0.67
BRCA1-223ENST00000494123 H3BQ15 152 aa10.85□□□□□ -0.67
BRCA1-223ENST00000494123 K7EIL1 84 aa10.85□□□□□ -0.67
BRCA1-223ENST00000494123 SOCS3O14543 225 aa10.85□□□□□ -0.67
BRCA1-223ENST00000494123 HIST1H1EP10412 219 aaKnown RBP10.85□□□□□ -0.67
BRCA1-223ENST00000494123 DEFB131AP59861 70 aa10.85□□□□□ -0.67
BRCA1-223ENST00000494123 PQLC2Q6ZP29 291 aa10.85□□□□□ -0.67
BRCA1-223ENST00000494123 BLNKQ8WV28 456 aa10.85□□□□□ -0.67
BRCA1-223ENST00000494123 RNF141Q8WVD5 230 aa10.85□□□□□ -0.67
BRCA1-223ENST00000494123 C17orf77Q96MU5 243 aa10.85□□□□□ -0.67
BRCA1-223ENST00000494123 FAM110AQ9BQ89 295 aa10.85□□□□□ -0.67
BRCA1-223ENST00000494123 WFDC10AQ9H1F0 79 aa10.85□□□□□ -0.67
BRCA1-223ENST00000494123 CTXND1A0A1B0GTU2 59 aa10.84□□□□□ -0.67
BRCA1-223ENST00000494123 DEFB121Q5J5C9 76 aa10.84□□□□□ -0.67
BRCA1-223ENST00000494123 DEFB125Q8N687 156 aa10.84□□□□□ -0.67
BRCA1-223ENST00000494123 SLC50A1Q9BRV3 221 aa10.84□□□□□ -0.67
BRCA1-223ENST00000494123 TUBA4BQ9H853 241 aa10.84□□□□□ -0.67
BRCA1-223ENST00000494123 ZNF586Q9NXT0 402 aa10.84□□□□□ -0.67
BRCA1-223ENST00000494123 NBEAP1P0C6P0 100 aa10.84□□□□□ -0.67
BRCA1-223ENST00000494123 STAG3L2P0CL84 134 aa10.84□□□□□ -0.67
BRCA1-223ENST00000494123 STAG3L3P0CL85 134 aa10.84□□□□□ -0.67
BRCA1-223ENST00000494123 ARL14EPLP0DKL9 152 aa10.84□□□□□ -0.67
BRCA1-223ENST00000494123 APRG1Q8IVJ8 170 aa10.84□□□□□ -0.67
BRCA1-223ENST00000494123 FAM213BQ8TBF2 198 aa10.84□□□□□ -0.67
BRCA1-223ENST00000494123 MRAPQ8TCY5 172 aa10.84□□□□□ -0.67
BRCA1-223ENST00000494123 C19orf73Q9NVV2 129 aa10.84□□□□□ -0.67
BRCA1-223ENST00000494123 TRBV19A0A075B6N1 114 aa10.83□□□□□ -0.68
BRCA1-223ENST00000494123 SLC17A3O00476 420 aa10.83□□□□□ -0.68
BRCA1-223ENST00000494123 CXorf1O96002 111 aa10.83□□□□□ -0.68
BRCA1-223ENST00000494123 ZNF726P1Q15940 193 aa10.83□□□□□ -0.68
BRCA1-223ENST00000494123 IGFL4Q6B9Z1 124 aa10.83□□□□□ -0.68
BRCA1-223ENST00000494123 DPPA3Q6W0C5 159 aa10.83□□□□□ -0.68
BRCA1-223ENST00000494123 SSX7Q7RTT5 188 aa10.83□□□□□ -0.68
BRCA1-223ENST00000494123 IQCF2Q8IXL9 164 aa10.83□□□□□ -0.68
BRCA1-223ENST00000494123 FXYD5Q96DB9 178 aa10.83□□□□□ -0.68
BRCA1-223ENST00000494123 ZNF503Q96F45 646 aa10.83□□□□□ -0.68
BRCA1-223ENST00000494123 SRD5A3Q9H8P0 318 aa10.83□□□□□ -0.68
BRCA1-223ENST00000494123 ZNF331Q9NQX6 463 aaPredicted RBP10.83□□□□□ -0.68
BRCA1-223ENST00000494123 TRAV8-2A0A0B4J237 113 aa10.82□□□□□ -0.68
BRCA1-223ENST00000494123 ZNF253O75346 499 aa10.82□□□□□ -0.68
BRCA1-223ENST00000494123 IGHV4-30-4P0DP06 118 aa10.82□□□□□ -0.68
BRCA1-223ENST00000494123 FHITP49789 147 aa10.82□□□□□ -0.68
BRCA1-223ENST00000494123 RAB5CP51148 216 aa10.82□□□□□ -0.68
BRCA1-223ENST00000494123 PSG9Q00887 426 aa10.82□□□□□ -0.68
BRCA1-223ENST00000494123 PDE6HQ13956 83 aa10.82□□□□□ -0.68
BRCA1-223ENST00000494123 RNF182Q8N6D2 247 aa10.82□□□□□ -0.68
BRCA1-223ENST00000494123 SAT2Q96F10 170 aaPredicted RBP10.82□□□□□ -0.68
BRCA1-223ENST00000494123 PHYHIPLQ96FC7 376 aa10.82□□□□□ -0.68
BRCA1-223ENST00000494123 AAMDCQ9H7C9 122 aa10.82□□□□□ -0.68
BRCA1-223ENST00000494123 PLA2G2EQ9NZK7 142 aa10.82□□□□□ -0.68
BRCA1-223ENST00000494123 MAP1LC3B2A6NCE7 125 aa10.81□□□□□ -0.68
BRCA1-223ENST00000494123 ZNF124Q15973 351 aa10.81□□□□□ -0.68
BRCA1-223ENST00000494123 ZNF738Q8NE65 137 aa10.81□□□□□ -0.68
BRCA1-223ENST00000494123 MAP1LC3BQ9GZQ8 125 aa10.81□□□□□ -0.68
BRCA1-223ENST00000494123 CLEC5AQ9NY25 188 aa10.81□□□□□ -0.68
BRCA1-223ENST00000494123 GCHFRP30047 84 aa10.8□□□□□ -0.68
BRCA1-223ENST00000494123 SULT1A2P50226 295 aa10.8□□□□□ -0.68
BRCA1-223ENST00000494123 FGF8P55075 233 aaPredicted RBP10.8□□□□□ -0.68
BRCA1-223ENST00000494123 ALKAL2Q6UX46 152 aa10.8□□□□□ -0.68
BRCA1-223ENST00000494123 C20orf173Q96LM9 149 aa10.8□□□□□ -0.68
BRCA1-223ENST00000494123 TMEM167BQ9NRX6 74 aa10.8□□□□□ -0.68
BRCA1-223ENST00000494123 MEGF8Q7Z7M0 2845 aa10.8□□□□□ -0.68
BRCA1-223ENST00000494123 FBN3Q75N90 2809 aa10.8□□□□□ -0.68
BRCA1-223ENST00000494123 NDUFB4O95168 129 aa10.8□□□□□ -0.68
BRCA1-223ENST00000494123 HLA-DMBP28068 263 aa10.8□□□□□ -0.68
BRCA1-223ENST00000494123 PSG3Q16557 428 aa10.8□□□□□ -0.68
BRCA1-223ENST00000494123 ACTL10Q5JWF8 245 aa10.8□□□□□ -0.68
BRCA1-223ENST00000494123 SFT2D1Q8WV19 159 aa10.8□□□□□ -0.68
BRCA1-223ENST00000494123 DNAH3Q8TD57 4116 aa10.79□□□□□ -0.68
BRCA1-223ENST00000494123 KNCNA6PVL3 124 aa10.79□□□□□ -0.68
BRCA1-223ENST00000494123 H2AFB1P0C5Y9 115 aa10.79□□□□□ -0.68
BRCA1-223ENST00000494123 RANP62826 216 aaKnown RBP10.79□□□□□ -0.68
BRCA1-223ENST00000494123 FAM74A1Q5RGS3 127 aa10.79□□□□□ -0.68
BRCA1-223ENST00000494123 EBLN2Q6P2I7 272 aa10.79□□□□□ -0.68
BRCA1-223ENST00000494123 STHQ8IWL8 128 aa10.79□□□□□ -0.68
BRCA1-223ENST00000494123 CITED4Q96RK1 184 aa10.79□□□□□ -0.68
BRCA1-223ENST00000494123 A8MZ25 164 aa10.78□□□□□ -0.68
BRCA1-223ENST00000494123 FRMD6-AS1P0C7T7 363 aa10.78□□□□□ -0.68
BRCA1-223ENST00000494123 ICAM4Q14773 271 aa10.78□□□□□ -0.68
BRCA1-223ENST00000494123 FOXI2Q6ZQN5 318 aa10.78□□□□□ -0.68
BRCA1-223ENST00000494123 LYPD1Q8N2G4 141 aa10.78□□□□□ -0.68
BRCA1-223ENST00000494123 EXOC3-AS1Q8N2X6 119 aa10.78□□□□□ -0.68
BRCA1-223ENST00000494123 Q9H3A6 140 aa10.78□□□□□ -0.68
BRCA1-223ENST00000494123 PRELID1Q9Y255 219 aa10.78□□□□□ -0.68
BRCA1-223ENST00000494123 LOC102724200A0A096LPH7 203 aaPredicted RBP10.77□□□□□ -0.68
BRCA1-223ENST00000494123 A0A1B0GV50 99 aa10.77□□□□□ -0.68
BRCA1-223ENST00000494123 ZNF705EA8MWA4 302 aaPredicted RBP10.77□□□□□ -0.68
BRCA1-223ENST00000494123 TEX46H3BTG2 121 aa10.77□□□□□ -0.68
BRCA1-223ENST00000494123 DEFB1P60022 68 aa10.77□□□□□ -0.68
BRCA1-223ENST00000494123 MBD3L1Q8WWY6 194 aa10.77□□□□□ -0.68
BRCA1-223ENST00000494123 RPUSD4Q96CM3 377 aaKnown RBP10.77□□□□□ -0.68
BRCA1-223ENST00000494123 TMPRSS5Q9H3S3 457 aa10.77□□□□□ -0.68
BRCA1-223ENST00000494123 SAV1Q9H4B6 383 aaPredicted RBP10.77□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms