RNA–Protein interactions for RNA: ENST00000494043.1

MCF2L-231, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 896 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-231ENST00000494043 LOC102723971A0A1B0GUV8 181 aa8.61□□□□□ -1.03
MCF2L-231ENST00000494043 A0A1W2PRE2 83 aa8.61□□□□□ -1.03
MCF2L-231ENST00000494043 RAB19A4D1S5 217 aa8.61□□□□□ -1.03
MCF2L-231ENST00000494043 RBFOX3A6NFN3 312 aa8.61□□□□□ -1.03
MCF2L-231ENST00000494043 FAM74A7A6NL05 159 aa8.61□□□□□ -1.03
MCF2L-231ENST00000494043 ZNF785A8K8V0 405 aa8.61□□□□□ -1.03
MCF2L-231ENST00000494043 SLC17A3O00476 420 aa8.61□□□□□ -1.03
MCF2L-231ENST00000494043 PAGE4O60829 102 aa8.61□□□□□ -1.03
MCF2L-231ENST00000494043 ZNF253O75346 499 aa8.61□□□□□ -1.03
MCF2L-231ENST00000494043 NDUFB4O95168 129 aa8.61□□□□□ -1.03
MCF2L-231ENST00000494043 CD5P06127 495 aa8.61□□□□□ -1.03
MCF2L-231ENST00000494043 TAGLN2P37802 199 aaKnown RBP8.61□□□□□ -1.03
MCF2L-231ENST00000494043 MEOX2P50222 304 aa8.61□□□□□ -1.03
MCF2L-231ENST00000494043 KRTAP21-3Q3LHN1 58 aa8.61□□□□□ -1.03
MCF2L-231ENST00000494043 TOR2AQ5JU69 321 aa8.61□□□□□ -1.03
MCF2L-231ENST00000494043 ZNF506Q5JVG8 444 aa8.61□□□□□ -1.03
MCF2L-231ENST00000494043 FAM90A2PQ658T7 463 aa8.61□□□□□ -1.03
MCF2L-231ENST00000494043 KRTAP3-3Q9BYR6 98 aa8.61□□□□□ -1.03
MCF2L-231ENST00000494043 KRTAP3-2Q9BYR7 98 aa8.61□□□□□ -1.03
MCF2L-231ENST00000494043 GGTLC3B5MD39 225 aa8.6□□□□□ -1.03
MCF2L-231ENST00000494043 SAP30O75446 220 aa8.6□□□□□ -1.03
MCF2L-231ENST00000494043 RPL11P62913 178 aaKnown RBP8.6□□□□□ -1.03
MCF2L-231ENST00000494043 ICAM4Q14773 271 aa8.6□□□□□ -1.03
MCF2L-231ENST00000494043 NDUFA5Q16718 116 aa8.6□□□□□ -1.03
MCF2L-231ENST00000494043 DEFB114Q30KQ6 69 aa8.6□□□□□ -1.03
MCF2L-231ENST00000494043 CST9LP1Q5W188 147 aa8.6□□□□□ -1.03
MCF2L-231ENST00000494043 MDFIQ99750 246 aa8.6□□□□□ -1.03
MCF2L-231ENST00000494043 RARRES2Q99969 163 aa8.6□□□□□ -1.03
MCF2L-231ENST00000494043 EIF5A2Q9GZV4 153 aaKnown RBP8.6□□□□□ -1.03
MCF2L-231ENST00000494043 NRN1Q9NPD7 142 aa8.6□□□□□ -1.03
MCF2L-231ENST00000494043 VAX2Q9UIW0 290 aa8.6□□□□□ -1.03
MCF2L-231ENST00000494043 C11orf94C9JXX5 98 aa8.59□□□□□ -1.03
MCF2L-231ENST00000494043 SOCS3O14543 225 aa8.59□□□□□ -1.03
MCF2L-231ENST00000494043 ATP5G3P48201 142 aa8.59□□□□□ -1.03
MCF2L-231ENST00000494043 RANP62826 216 aaKnown RBP8.59□□□□□ -1.03
MCF2L-231ENST00000494043 PSG9Q00887 426 aa8.59□□□□□ -1.03
MCF2L-231ENST00000494043 MEF2BQ02080 365 aaPredicted RBP8.59□□□□□ -1.03
MCF2L-231ENST00000494043 LYPD1Q8N2G4 141 aa8.59□□□□□ -1.03
MCF2L-231ENST00000494043 RXFP4Q8TDU9 374 aa8.59□□□□□ -1.03
MCF2L-231ENST00000494043 TXNDC17Q9BRA2 123 aa8.59□□□□□ -1.03
MCF2L-231ENST00000494043 SLC50A1Q9BRV3 221 aa8.59□□□□□ -1.03
MCF2L-231ENST00000494043 NKX6-2Q9C056 277 aaPredicted RBP8.59□□□□□ -1.03
MCF2L-231ENST00000494043 Q9H3A6 140 aa8.59□□□□□ -1.03
MCF2L-231ENST00000494043 ZNF331Q9NQX6 463 aaPredicted RBP8.59□□□□□ -1.03
MCF2L-231ENST00000494043 OTORQ9NRC9 128 aa8.59□□□□□ -1.03
MCF2L-231ENST00000494043 IGKV3-7A0A075B6H7 116 aa8.58□□□□□ -1.04
MCF2L-231ENST00000494043 TRAV25A0A0B4J276 109 aa8.58□□□□□ -1.04
MCF2L-231ENST00000494043 CD81P60033 236 aa8.58□□□□□ -1.04
MCF2L-231ENST00000494043 SRSF3P84103 164 aaKnown RBP8.58□□□□□ -1.04
MCF2L-231ENST00000494043 PEA15Q15121 130 aa8.58□□□□□ -1.04
MCF2L-231ENST00000494043 CD300EQ496F6 205 aaPredicted RBP8.58□□□□□ -1.04
MCF2L-231ENST00000494043 SAMD13Q5VXD3 122 aa8.58□□□□□ -1.04
MCF2L-231ENST00000494043 RBPMS2Q6ZRY4 209 aaKnown RBP8.58□□□□□ -1.04
MCF2L-231ENST00000494043 CCDC28AQ8IWP9 274 aa8.58□□□□□ -1.04
MCF2L-231ENST00000494043 TMEM61Q8N0U2 210 aa8.58□□□□□ -1.04
MCF2L-231ENST00000494043 EXOC3-AS1Q8N2X6 119 aa8.58□□□□□ -1.04
MCF2L-231ENST00000494043 GBGT1Q8N5D6 347 aa8.58□□□□□ -1.04
MCF2L-231ENST00000494043 EIF4E3Q8N5X7 224 aaKnown RBP8.58□□□□□ -1.04
MCF2L-231ENST00000494043 SPATA3Q8NHX4 192 aa8.58□□□□□ -1.04
MCF2L-231ENST00000494043 DCANP1Q8TF63 244 aa8.58□□□□□ -1.04
MCF2L-231ENST00000494043 MS4A6AQ9H2W1 248 aa8.58□□□□□ -1.04
MCF2L-231ENST00000494043 TRAV2A0A0B4J234 112 aa8.57□□□□□ -1.04
MCF2L-231ENST00000494043 TRAV8-2A0A0B4J237 113 aa8.57□□□□□ -1.04
MCF2L-231ENST00000494043 PGPA6NDG6 321 aa8.57□□□□□ -1.04
MCF2L-231ENST00000494043 DNASE2O00115 360 aaPredicted RBP8.57□□□□□ -1.04
MCF2L-231ENST00000494043 ISLRO14498 428 aa8.57□□□□□ -1.04
MCF2L-231ENST00000494043 TSPAN4O14817 238 aa8.57□□□□□ -1.04
MCF2L-231ENST00000494043 NDUFS6O75380 124 aaKnown RBP8.57□□□□□ -1.04
MCF2L-231ENST00000494043 IGLV1-51P01701 117 aa8.57□□□□□ -1.04
MCF2L-231ENST00000494043 CD33P20138 364 aa8.57□□□□□ -1.04
MCF2L-231ENST00000494043 SUMO1P63165 101 aaKnown RBP8.57□□□□□ -1.04
MCF2L-231ENST00000494043 UQCC3Q6UW78 93 aa8.57□□□□□ -1.04
MCF2L-231ENST00000494043 SLC7A5P1Q8MH63 180 aa8.57□□□□□ -1.04
MCF2L-231ENST00000494043 WFDC9Q8NEX5 89 aa8.57□□□□□ -1.04
MCF2L-231ENST00000494043 OR2K2Q8NGT1 345 aa8.57□□□□□ -1.04
MCF2L-231ENST00000494043 C16orf92Q96LL3 132 aa8.57□□□□□ -1.04
MCF2L-231ENST00000494043 MCRIP2Q9BUT9 160 aaKnown RBP8.57□□□□□ -1.04
MCF2L-231ENST00000494043 SMDT1Q9H4I9 107 aa8.57□□□□□ -1.04
MCF2L-231ENST00000494043 AAMDCQ9H7C9 122 aa8.57□□□□□ -1.04
MCF2L-231ENST00000494043 IZUMO1RA6ND01 250 aa8.56□□□□□ -1.04
MCF2L-231ENST00000494043 C9JQL5 133 aa8.56□□□□□ -1.04
MCF2L-231ENST00000494043 F6UZH7 168 aa8.56□□□□□ -1.04
MCF2L-231ENST00000494043 K7EQG2 157 aa8.56□□□□□ -1.04
MCF2L-231ENST00000494043 PDE6DO43924 150 aa8.56□□□□□ -1.04
MCF2L-231ENST00000494043 SLC25A5P05141 298 aaKnown RBP8.56□□□□□ -1.04
MCF2L-231ENST00000494043 SRP19P09132 144 aaKnown RBP8.56□□□□□ -1.04
MCF2L-231ENST00000494043 HLA-DMBP28068 263 aa8.56□□□□□ -1.04
MCF2L-231ENST00000494043 TFPI2P48307 235 aa8.56□□□□□ -1.04
MCF2L-231ENST00000494043 INSL3P51460 131 aa8.56□□□□□ -1.04
MCF2L-231ENST00000494043 PAFAH1B2P68402 229 aa8.56□□□□□ -1.04
MCF2L-231ENST00000494043 C9orf66Q5T8R8 295 aa8.56□□□□□ -1.04
MCF2L-231ENST00000494043 IGFL4Q6B9Z1 124 aa8.56□□□□□ -1.04
MCF2L-231ENST00000494043 WFDC3Q8IUB2 231 aa8.56□□□□□ -1.04
MCF2L-231ENST00000494043 C5orf17Q8NAS9 161 aa8.56□□□□□ -1.04
MCF2L-231ENST00000494043 SPAG8Q99932 426 aaPredicted RBP8.56□□□□□ -1.04
MCF2L-231ENST00000494043 TCEAL7Q9BRU2 100 aa8.56□□□□□ -1.04
MCF2L-231ENST00000494043 TREM1Q9NP99 234 aa8.56□□□□□ -1.04
MCF2L-231ENST00000494043 CLEC5AQ9NY25 188 aa8.56□□□□□ -1.04
MCF2L-231ENST00000494043 PRELID1Q9Y255 219 aa8.56□□□□□ -1.04
MCF2L-231ENST00000494043 SCO2A0A1W2PP80 73 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms