RNA–Protein interactions for RNA: ENST00000493945.5

ACTB-213, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 1,236 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-213ENST00000493945 SPATA31B1PQ5VZV4 182 aa11.22□□□□□ -0.61
ACTB-213ENST00000493945 WFDC3Q8IUB2 231 aa11.22□□□□□ -0.61
ACTB-213ENST00000493945 LYPD1Q8N2G4 141 aa11.22□□□□□ -0.61
ACTB-213ENST00000493945 SFT2D1Q8WV19 159 aa11.22□□□□□ -0.61
ACTB-213ENST00000493945 SAT2Q96F10 170 aaPredicted RBP11.22□□□□□ -0.61
ACTB-213ENST00000493945 NKX6-2Q9C056 277 aaPredicted RBP11.22□□□□□ -0.61
ACTB-213ENST00000493945 PRELID1Q9Y255 219 aa11.22□□□□□ -0.61
ACTB-213ENST00000493945 VWFP04275 2813 aa11.21□□□□□ -0.61
ACTB-213ENST00000493945 K7EQG2 157 aa11.21□□□□□ -0.61
ACTB-213ENST00000493945 IFNA1P01562 189 aa11.21□□□□□ -0.61
ACTB-213ENST00000493945 OR10J4P0C629 311 aa11.21□□□□□ -0.61
ACTB-213ENST00000493945 GCHFRP30047 84 aa11.21□□□□□ -0.61
ACTB-213ENST00000493945 CD81P60033 236 aa11.21□□□□□ -0.61
ACTB-213ENST00000493945 RAB14P61106 215 aa11.21□□□□□ -0.61
ACTB-213ENST00000493945 MORN5Q5VZ52 161 aa11.21□□□□□ -0.61
ACTB-213ENST00000493945 TEX261Q6UWH6 196 aa11.21□□□□□ -0.61
ACTB-213ENST00000493945 BLNKQ8WV28 456 aa11.21□□□□□ -0.61
ACTB-213ENST00000493945 FAM167A-AS1Q96KT0 104 aa11.21□□□□□ -0.61
ACTB-213ENST00000493945 ARL2-SNX15V9GYD0 113 aa11.21□□□□□ -0.61
ACTB-213ENST00000493945 TRBV19A0A075B6N1 114 aa11.2□□□□□ -0.62
ACTB-213ENST00000493945 G3V4G9 280 aa11.2□□□□□ -0.62
ACTB-213ENST00000493945 PYYP10082 97 aa11.2□□□□□ -0.62
ACTB-213ENST00000493945 CSN1S1P47710 185 aa11.2□□□□□ -0.62
ACTB-213ENST00000493945 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.2□□□□□ -0.62
ACTB-213ENST00000493945 DCANP1Q8TF63 244 aa11.2□□□□□ -0.62
ACTB-213ENST00000493945 MBD3L1Q8WWY6 194 aa11.2□□□□□ -0.62
ACTB-213ENST00000493945 IZUMO1RA6ND01 250 aa11.19□□□□□ -0.62
ACTB-213ENST00000493945 MRPS12O15235 138 aaKnown RBP11.19□□□□□ -0.62
ACTB-213ENST00000493945 HMGB3O15347 200 aaKnown RBP11.19□□□□□ -0.62
ACTB-213ENST00000493945 TAGLN2P37802 199 aaKnown RBP11.19□□□□□ -0.62
ACTB-213ENST00000493945 BEAN1Q3B7T3 259 aa11.19□□□□□ -0.62
ACTB-213ENST00000493945 ZNF767PQ75MW2 155 aa11.19□□□□□ -0.62
ACTB-213ENST00000493945 CMTM2Q8TAZ6 248 aa11.19□□□□□ -0.62
ACTB-213ENST00000493945 FXYD5Q96DB9 178 aa11.19□□□□□ -0.62
ACTB-213ENST00000493945 MANBALQ9NQG1 85 aa11.19□□□□□ -0.62
ACTB-213ENST00000493945 ZNF331Q9NQX6 463 aaPredicted RBP11.19□□□□□ -0.62
ACTB-213ENST00000493945 TRAV1-1A0A0B4J248 108 aa11.18□□□□□ -0.62
ACTB-213ENST00000493945 ZNF688P0C7X2 276 aa11.18□□□□□ -0.62
ACTB-213ENST00000493945 PSMG4Q5JS54 123 aa11.18□□□□□ -0.62
ACTB-213ENST00000493945 EBLN2Q6P2I7 272 aa11.18□□□□□ -0.62
ACTB-213ENST00000493945 ZNF738Q8NE65 137 aa11.18□□□□□ -0.62
ACTB-213ENST00000493945 ZNF680Q8NEM1 530 aa11.18□□□□□ -0.62
ACTB-213ENST00000493945 RXFP4Q8TDU9 374 aa11.18□□□□□ -0.62
ACTB-213ENST00000493945 MRPL53Q96EL3 112 aaKnown RBP11.18□□□□□ -0.62
ACTB-213ENST00000493945 LINC00052Q96N35 136 aa11.18□□□□□ -0.62
ACTB-213ENST00000493945 ZNF586Q9NXT0 402 aa11.18□□□□□ -0.62
ACTB-213ENST00000493945 SELENOKQ9Y6D0 94 aa11.18□□□□□ -0.62
ACTB-213ENST00000493945 K7EQM0 130 aa11.17□□□□□ -0.62
ACTB-213ENST00000493945 FHITP49789 147 aa11.17□□□□□ -0.62
ACTB-213ENST00000493945 ZNF726P1Q15940 193 aa11.17□□□□□ -0.62
ACTB-213ENST00000493945 KPRPQ5T749 579 aaPredicted RBP11.17□□□□□ -0.62
ACTB-213ENST00000493945 TCEAL7Q9BRU2 100 aa11.17□□□□□ -0.62
ACTB-213ENST00000493945 OTORQ9NRC9 128 aa11.17□□□□□ -0.62
ACTB-213ENST00000493945 SMAD5-AS1Q9Y6J3 95 aa11.17□□□□□ -0.62
ACTB-213ENST00000493945 TRRAPQ9Y4A5 3859 aa11.16□□□□□ -0.62
ACTB-213ENST00000493945 A0A1W2PRE2 83 aa11.16□□□□□ -0.62
ACTB-213ENST00000493945 H3BQ15 152 aa11.16□□□□□ -0.62
ACTB-213ENST00000493945 SOCS3O14543 225 aa11.16□□□□□ -0.62
ACTB-213ENST00000493945 FGF8P55075 233 aaPredicted RBP11.16□□□□□ -0.62
ACTB-213ENST00000493945 DEFB131AP59861 70 aa11.16□□□□□ -0.62
ACTB-213ENST00000493945 ARL6IP6Q8N6S5 226 aa11.16□□□□□ -0.62
ACTB-213ENST00000493945 TXNDC17Q9BRA2 123 aa11.16□□□□□ -0.62
ACTB-213ENST00000493945 MAP6D1Q9H9H5 199 aa11.16□□□□□ -0.62
ACTB-213ENST00000493945 MGAM2Q2M2H8 2515 aa11.16□□□□□ -0.62
ACTB-213ENST00000493945 SERTM2A0A1B0GWG4 89 aa11.15□□□□□ -0.62
ACTB-213ENST00000493945 F6UZH7 168 aa11.15□□□□□ -0.62
ACTB-213ENST00000493945 DUSP14O95147 198 aaKnown RBP11.15□□□□□ -0.62
ACTB-213ENST00000493945 RANP62826 216 aaKnown RBP11.15□□□□□ -0.62
ACTB-213ENST00000493945 PSG3Q16557 428 aa11.15□□□□□ -0.62
ACTB-213ENST00000493945 FOXI2Q6ZQN5 318 aa11.15□□□□□ -0.62
ACTB-213ENST00000493945 SSX7Q7RTT5 188 aa11.15□□□□□ -0.62
ACTB-213ENST00000493945 SUN5Q8TC36 379 aa11.15□□□□□ -0.62
ACTB-213ENST00000493945 ZNF503Q96F45 646 aa11.15□□□□□ -0.62
ACTB-213ENST00000493945 Q9H3A6 140 aa11.15□□□□□ -0.62
ACTB-213ENST00000493945 TUBA4BQ9H853 241 aa11.15□□□□□ -0.62
ACTB-213ENST00000493945 H3BTX0 84 aa11.14□□□□□ -0.63
ACTB-213ENST00000493945 ICAM4Q14773 271 aa11.14□□□□□ -0.63
ACTB-213ENST00000493945 STHQ8IWL8 128 aa11.14□□□□□ -0.63
ACTB-213ENST00000493945 C5orf17Q8NAS9 161 aa11.14□□□□□ -0.63
ACTB-213ENST00000493945 OR10J6PQ8NGY7 276 aa11.14□□□□□ -0.63
ACTB-213ENST00000493945 PRR25Q96S07 402 aa11.14□□□□□ -0.63
ACTB-213ENST00000493945 A0A1B0GV50 99 aa11.13□□□□□ -0.63
ACTB-213ENST00000493945 SLC17A3O00476 420 aa11.13□□□□□ -0.63
ACTB-213ENST00000493945 SNRPCP09234 159 aaKnown RBP11.13□□□□□ -0.63
ACTB-213ENST00000493945 CD7P09564 240 aa11.13□□□□□ -0.63
ACTB-213ENST00000493945 NUTF2P61970 127 aaKnown RBP11.13□□□□□ -0.63
ACTB-213ENST00000493945 ODF3L2Q3SX64 289 aa11.13□□□□□ -0.63
ACTB-213ENST00000493945 CST9LP1Q5W188 147 aa11.13□□□□□ -0.63
ACTB-213ENST00000493945 RPUSD4Q96CM3 377 aaKnown RBP11.13□□□□□ -0.63
ACTB-213ENST00000493945 PPP1R14DQ9NXH3 145 aa11.13□□□□□ -0.63
ACTB-213ENST00000493945 PLA2G2EQ9NZK7 142 aa11.13□□□□□ -0.63
ACTB-213ENST00000493945 GNG13Q9P2W3 67 aa11.13□□□□□ -0.63
ACTB-213ENST00000493945 PGPA6NDG6 321 aa11.12□□□□□ -0.63
ACTB-213ENST00000493945 FBLL1A6NHQ2 334 aaKnown RBP11.12□□□□□ -0.63
ACTB-213ENST00000493945 EIF3GO75821 320 aaKnown RBP eCLIP11.12□□□□□ -0.63
ACTB-213ENST00000493945 SLC25A5P05141 298 aaKnown RBP11.12□□□□□ -0.63
ACTB-213ENST00000493945 UBE2G2P60604 165 aa11.12□□□□□ -0.63
ACTB-213ENST00000493945 PMS2P11Q13670 270 aa11.12□□□□□ -0.63
ACTB-213ENST00000493945 C17orf77Q96MU5 243 aa11.12□□□□□ -0.63
ACTB-213ENST00000493945 PKD1L1Q8TDX9 2849 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms