RNA–Protein interactions for RNA: ENST00000493903.1

GTF3A-208, Transcript of general transcription factor IIIA, humanhuman

TSL 3

Gene GTF3A, Length 748 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-208ENST00000493903 PYDC2Q56P42 97 aa2.42□□□□□ -2.02
GTF3A-208ENST00000493903 DYNAPQ8N1N2 210 aa2.42□□□□□ -2.02
GTF3A-208ENST00000493903 SLC25A40Q8TBP6 338 aa2.42□□□□□ -2.02
GTF3A-208ENST00000493903 ZNF471Q9BX82 626 aaPredicted RBP2.42□□□□□ -2.02
GTF3A-208ENST00000493903 CHST6Q9GZX3 395 aa2.42□□□□□ -2.02
GTF3A-208ENST00000493903 ACER3Q9NUN7 267 aa2.42□□□□□ -2.02
GTF3A-208ENST00000493903 SSR3Q9UNL2 185 aa2.42□□□□□ -2.02
GTF3A-208ENST00000493903 NOTCH2Q04721 2471 aa2.42□□□□□ -2.02
GTF3A-208ENST00000493903 TLN1Q9Y490 2541 aaKnown RBP2.41□□□□□ -2.02
GTF3A-208ENST00000493903 G3V3Q6 166 aa2.41□□□□□ -2.02
GTF3A-208ENST00000493903 H7C1C5 153 aa2.41□□□□□ -2.02
GTF3A-208ENST00000493903 C19orf84I3L1E1 186 aa2.41□□□□□ -2.02
GTF3A-208ENST00000493903 GPR31O00270 319 aa2.41□□□□□ -2.02
GTF3A-208ENST00000493903 GNRH2O43555 120 aa2.41□□□□□ -2.02
GTF3A-208ENST00000493903 SMIM17P0DL12 118 aa2.41□□□□□ -2.02
GTF3A-208ENST00000493903 PSMB8P28062 276 aa2.41□□□□□ -2.02
GTF3A-208ENST00000493903 EMP1P54849 157 aa2.41□□□□□ -2.02
GTF3A-208ENST00000493903 LCN6P62502 163 aa2.41□□□□□ -2.02
GTF3A-208ENST00000493903 RHOBP62745 196 aa2.41□□□□□ -2.02
GTF3A-208ENST00000493903 GNG5P63218 68 aa2.41□□□□□ -2.02
GTF3A-208ENST00000493903 MEF2BQ02080 365 aaPredicted RBP2.41□□□□□ -2.02
GTF3A-208ENST00000493903 SPANXN3Q5MJ09 141 aa2.41□□□□□ -2.02
GTF3A-208ENST00000493903 MSRB3Q8IXL7 192 aa2.41□□□□□ -2.02
GTF3A-208ENST00000493903 ZNF439Q8NDP4 499 aa2.41□□□□□ -2.02
GTF3A-208ENST00000493903 PYDC1Q8WXC3 89 aa2.41□□□□□ -2.02
GTF3A-208ENST00000493903 GPER1Q99527 375 aa2.41□□□□□ -2.02
GTF3A-208ENST00000493903 PBDC1Q9BVG4 233 aa2.41□□□□□ -2.02
GTF3A-208ENST00000493903 IMUPQ9GZP8 106 aa2.41□□□□□ -2.02
GTF3A-208ENST00000493903 TP73-AS1Q9UF72 201 aa2.41□□□□□ -2.02
GTF3A-208ENST00000493903 PSORS1C2Q9UIG4 136 aa2.41□□□□□ -2.02
GTF3A-208ENST00000493903 SLC35A3Q9Y2D2 325 aa2.41□□□□□ -2.02
GTF3A-208ENST00000493903 DOPEY2Q9Y3R5 2298 aa2.41□□□□□ -2.02
GTF3A-208ENST00000493903 GOLGA4Q13439 2230 aaKnown RBP2.41□□□□□ -2.02
GTF3A-208ENST00000493903 FBN2P35556 2912 aa2.41□□□□□ -2.02
GTF3A-208ENST00000493903 MYH11P35749 1972 aa2.4□□□□□ -2.02
GTF3A-208ENST00000493903 ABCA12Q86UK0 2595 aa2.4□□□□□ -2.02
GTF3A-208ENST00000493903 AKAP9Q99996 3911 aa2.4□□□□□ -2.03
GTF3A-208ENST00000493903 CSMD1Q96PZ7 3565 aa2.4□□□□□ -2.03
GTF3A-208ENST00000493903 TRGV5A0A0B4J1U4 118 aa2.4□□□□□ -2.03
GTF3A-208ENST00000493903 MDFIC2A0A1B0GVS7 189 aa2.4□□□□□ -2.03
GTF3A-208ENST00000493903 A0A1W2PNM2 257 aa2.4□□□□□ -2.03
GTF3A-208ENST00000493903 A0A1W2PNU3 283 aaPredicted RBP2.4□□□□□ -2.03
GTF3A-208ENST00000493903 MFSD11O43934 449 aa2.4□□□□□ -2.03
GTF3A-208ENST00000493903 CREBL2O60519 120 aaPredicted RBP2.4□□□□□ -2.03
GTF3A-208ENST00000493903 OR2J2O76002 312 aa2.4□□□□□ -2.03
GTF3A-208ENST00000493903 IGHV3-7P01780 117 aa2.4□□□□□ -2.03
GTF3A-208ENST00000493903 CRHP06850 196 aa2.4□□□□□ -2.03
GTF3A-208ENST00000493903 MSMBP08118 114 aa2.4□□□□□ -2.03
GTF3A-208ENST00000493903 RPS4Y1P22090 263 aaKnown RBP2.4□□□□□ -2.03
GTF3A-208ENST00000493903 MSNP26038 577 aaKnown RBP2.4□□□□□ -2.03
GTF3A-208ENST00000493903 HLA-DMBP28068 263 aa2.4□□□□□ -2.03
GTF3A-208ENST00000493903 ATP5G3P48201 142 aa2.4□□□□□ -2.03
GTF3A-208ENST00000493903 KRTAP12-2P59991 146 aa2.4□□□□□ -2.03
GTF3A-208ENST00000493903 SCGB2B2Q4G0G5 96 aa2.4□□□□□ -2.03
GTF3A-208ENST00000493903 LYRM7Q5U5X0 104 aa2.4□□□□□ -2.03
GTF3A-208ENST00000493903 ZNF705AQ6ZN79 300 aaPredicted RBP2.4□□□□□ -2.03
GTF3A-208ENST00000493903 TCF24Q7RTU0 167 aa2.4□□□□□ -2.03
GTF3A-208ENST00000493903 LHFPL1Q86WI0 220 aa2.4□□□□□ -2.03
GTF3A-208ENST00000493903 PHF13Q86YI8 300 aaPredicted RBP2.4□□□□□ -2.03
GTF3A-208ENST00000493903 OR4C16Q8NGL9 310 aa2.4□□□□□ -2.03
GTF3A-208ENST00000493903 RASSF5Q8WWW0 418 aa2.4□□□□□ -2.03
GTF3A-208ENST00000493903 OR8D2Q9GZM6 311 aa2.4□□□□□ -2.03
GTF3A-208ENST00000493903 PBOV1Q9GZY1 135 aa2.4□□□□□ -2.03
GTF3A-208ENST00000493903 C19orf12Q9NSK7 152 aa2.4□□□□□ -2.03
GTF3A-208ENST00000493903 SS18L2Q9UHA2 77 aa2.4□□□□□ -2.03
GTF3A-208ENST00000493903 MINOS1-NBL1R4GNA1 71 aa2.4□□□□□ -2.03
GTF3A-208ENST00000493903 MYO18AQ92614 2054 aaKnown RBP2.4□□□□□ -2.03
GTF3A-208ENST00000493903 MYOFQ9NZM1 2061 aa2.4□□□□□ -2.03
GTF3A-208ENST00000493903 UTP20O75691 2785 aaKnown RBP2.39□□□□□ -2.03
GTF3A-208ENST00000493903 PLXNA2O75051 1894 aa2.39□□□□□ -2.03
GTF3A-208ENST00000493903 ZNF106Q9H2Y7 1883 aaKnown RBP2.39□□□□□ -2.03
GTF3A-208ENST00000493903 TCHHQ07283 1943 aa2.39□□□□□ -2.03
GTF3A-208ENST00000493903 KNL1Q8NG31 2342 aa2.39□□□□□ -2.03
GTF3A-208ENST00000493903 FAM92AA1XBS5 289 aa2.39□□□□□ -2.03
GTF3A-208ENST00000493903 VPS37CA5D8V6 355 aaPredicted RBP2.39□□□□□ -2.03
GTF3A-208ENST00000493903 GGT3PA6NGU5 568 aa2.39□□□□□ -2.03
GTF3A-208ENST00000493903 C11orf86A6NJI1 115 aa2.39□□□□□ -2.03
GTF3A-208ENST00000493903 IGLV6-57P01721 117 aa2.39□□□□□ -2.03
GTF3A-208ENST00000493903 TFPTP0C1Z6 253 aa2.39□□□□□ -2.03
GTF3A-208ENST00000493903 NFYAP23511 347 aaPredicted RBP2.39□□□□□ -2.03
GTF3A-208ENST00000493903 CASP1P29466 404 aa2.39□□□□□ -2.03
GTF3A-208ENST00000493903 PIGPP57054 158 aa2.39□□□□□ -2.03
GTF3A-208ENST00000493903 TPI1P60174 286 aa2.39□□□□□ -2.03
GTF3A-208ENST00000493903 TMEM86AQ8N2M4 240 aa2.39□□□□□ -2.03
GTF3A-208ENST00000493903 ZNF561Q8N587 486 aa2.39□□□□□ -2.03
GTF3A-208ENST00000493903 MALSU1Q96EH3 234 aa2.39□□□□□ -2.03
GTF3A-208ENST00000493903 RBM7Q9Y580 266 aaKnown RBP2.39□□□□□ -2.03
GTF3A-208ENST00000493903 NUMA1Q14980 2115 aa2.39□□□□□ -2.03
GTF3A-208ENST00000493903 MYLKQ15746 1914 aa2.38□□□□□ -2.03
GTF3A-208ENST00000493903 OTOGQ6ZRI0 2925 aa2.38□□□□□ -2.03
GTF3A-208ENST00000493903 KNTC1P50748 2209 aa2.38□□□□□ -2.03
GTF3A-208ENST00000493903 AHCTF1Q8WYP5 2266 aa2.38□□□□□ -2.03
GTF3A-208ENST00000493903 ITPR2Q14571 2701 aa2.38□□□□□ -2.03
GTF3A-208ENST00000493903 LRBAP50851 2863 aa2.38□□□□□ -2.03
GTF3A-208ENST00000493903 TRAV41A0A0B4J266 112 aa2.38□□□□□ -2.03
GTF3A-208ENST00000493903 A0A0J9YX75 114 aa2.38□□□□□ -2.03
GTF3A-208ENST00000493903 SPRR5A0A1B0GTR4 108 aa2.38□□□□□ -2.03
GTF3A-208ENST00000493903 BUB1B-PAK6H3BSN5 160 aa2.38□□□□□ -2.03
GTF3A-208ENST00000493903 PRB2P02812 416 aaPredicted RBP2.38□□□□□ -2.03
GTF3A-208ENST00000493903 ZNF80P51504 273 aaPredicted RBP2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms