RNA–Protein interactions for RNA: ENST00000493682.6

COL9A1-210, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 5

Gene COL9A1, Length 1,117 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-210ENST00000493682 TIMM8BQ9Y5J9 83 aaPredicted RBP12.13□□□□□ -0.47
COL9A1-210ENST00000493682 A0A087X0K7 114 aa12.12□□□□□ -0.47
COL9A1-210ENST00000493682 OR5G3P0C626 314 aa12.12□□□□□ -0.47
COL9A1-210ENST00000493682 LINC00869P0C866 280 aa12.12□□□□□ -0.47
COL9A1-210ENST00000493682 POLR2GP62487 172 aaKnown RBP eCLIP12.12□□□□□ -0.47
COL9A1-210ENST00000493682 ID3Q02535 119 aa12.12□□□□□ -0.47
COL9A1-210ENST00000493682 MAPKAPK5-AS1Q8N8E1 139 aa12.12□□□□□ -0.47
COL9A1-210ENST00000493682 PMS2P5A8MQ11 134 aa12.11□□□□□ -0.47
COL9A1-210ENST00000493682 H3BMQ9 156 aa12.11□□□□□ -0.47
COL9A1-210ENST00000493682 SELENOTP62341 195 aa12.11□□□□□ -0.47
COL9A1-210ENST00000493682 CLINT1Q14677 625 aa12.11□□□□□ -0.47
COL9A1-210ENST00000493682 SSX7Q7RTT5 188 aa12.11□□□□□ -0.47
COL9A1-210ENST00000493682 LRRC20Q8TCA0 184 aa12.11□□□□□ -0.47
COL9A1-210ENST00000493682 NOP10Q9NPE3 64 aaKnown RBP12.11□□□□□ -0.47
COL9A1-210ENST00000493682 PSENENQ9NZ42 101 aa12.11□□□□□ -0.47
COL9A1-210ENST00000493682 ADAP1O75689 374 aa12.1□□□□□ -0.47
COL9A1-210ENST00000493682 CDKN1BP46527 198 aa12.1□□□□□ -0.47
COL9A1-210ENST00000493682 ZNF493Q6ZR52 646 aa12.1□□□□□ -0.47
COL9A1-210ENST00000493682 RNASE8Q8TDE3 154 aaKnown RBP12.1□□□□□ -0.47
COL9A1-210ENST00000493682 RPUSD4Q96CM3 377 aaKnown RBP12.1□□□□□ -0.47
COL9A1-210ENST00000493682 ARL6Q9H0F7 186 aa12.1□□□□□ -0.47
COL9A1-210ENST00000493682 V9GYH0 126 aa12.1□□□□□ -0.47
COL9A1-210ENST00000493682 MRPS12O15235 138 aaKnown RBP12.09□□□□□ -0.47
COL9A1-210ENST00000493682 NOL3O60936 208 aaKnown RBP12.09□□□□□ -0.47
COL9A1-210ENST00000493682 CCNKO75909 580 aa12.09□□□□□ -0.47
COL9A1-210ENST00000493682 RRAS2P62070 204 aaPredicted RBP12.09□□□□□ -0.47
COL9A1-210ENST00000493682 PATE2Q6UY27 113 aa12.09□□□□□ -0.47
COL9A1-210ENST00000493682 S100A7AQ86SG5 101 aa12.09□□□□□ -0.47
COL9A1-210ENST00000493682 TMEM263Q8WUH6 116 aaKnown RBP12.09□□□□□ -0.47
COL9A1-210ENST00000493682 DEDD2Q8WXF8 326 aa12.09□□□□□ -0.47
COL9A1-210ENST00000493682 Q9H8V8 135 aa12.09□□□□□ -0.47
COL9A1-210ENST00000493682 H7BYZ3 331 aa12.08□□□□□ -0.48
COL9A1-210ENST00000493682 SSSCA1O60232 199 aa12.08□□□□□ -0.48
COL9A1-210ENST00000493682 ANXA7P20073 488 aaKnown RBP12.08□□□□□ -0.48
COL9A1-210ENST00000493682 UBE2MP61081 183 aaKnown RBP12.08□□□□□ -0.48
COL9A1-210ENST00000493682 DLK1P80370 383 aa12.08□□□□□ -0.48
COL9A1-210ENST00000493682 SPATA12Q7Z6I5 190 aa12.08□□□□□ -0.48
COL9A1-210ENST00000493682 LINC00528Q8N1L1 170 aa12.08□□□□□ -0.48
COL9A1-210ENST00000493682 SMIM8Q96KF7 97 aa12.08□□□□□ -0.48
COL9A1-210ENST00000493682 LRP1BQ9NZR2 4599 aa12.07□□□□□ -0.48
COL9A1-210ENST00000493682 C9orf170A2RU37 121 aa12.07□□□□□ -0.48
COL9A1-210ENST00000493682 K7EPK0 472 aa12.07□□□□□ -0.48
COL9A1-210ENST00000493682 OR5I1Q13606 314 aa12.07□□□□□ -0.48
COL9A1-210ENST00000493682 KIR3DS1Q14943 382 aa12.07□□□□□ -0.48
COL9A1-210ENST00000493682 OR10J6PQ8NGY7 276 aa12.07□□□□□ -0.48
COL9A1-210ENST00000493682 GNPNAT1Q96EK6 184 aaPredicted RBP12.07□□□□□ -0.48
COL9A1-210ENST00000493682 KRTAP1-5Q9BYS1 174 aa12.07□□□□□ -0.48
COL9A1-210ENST00000493682 ARV1Q9H2C2 271 aa12.07□□□□□ -0.48
COL9A1-210ENST00000493682 NPVFQ9HCQ7 196 aa12.07□□□□□ -0.48
COL9A1-210ENST00000493682 ZNF331Q9NQX6 463 aaPredicted RBP12.07□□□□□ -0.48
COL9A1-210ENST00000493682 TRAV26-1A0A087WT03 109 aa12.06□□□□□ -0.48
COL9A1-210ENST00000493682 FNDC10F2Z333 226 aa12.06□□□□□ -0.48
COL9A1-210ENST00000493682 SNRPCP09234 159 aaKnown RBP12.06□□□□□ -0.48
COL9A1-210ENST00000493682 METTL15P1P0C7V9 234 aa12.06□□□□□ -0.48
COL9A1-210ENST00000493682 CXCL2P19875 107 aa12.06□□□□□ -0.48
COL9A1-210ENST00000493682 M6PRP20645 277 aa12.06□□□□□ -0.48
COL9A1-210ENST00000493682 SLC38A11Q08AI6 406 aa12.06□□□□□ -0.48
COL9A1-210ENST00000493682 TMEM14EPQ6UXP3 125 aa12.06□□□□□ -0.48
COL9A1-210ENST00000493682 Q8N1X5 172 aa12.06□□□□□ -0.48
COL9A1-210ENST00000493682 LINC00612Q8N6U2 182 aa12.06□□□□□ -0.48
COL9A1-210ENST00000493682 RXFP4Q8TDU9 374 aa12.06□□□□□ -0.48
COL9A1-210ENST00000493682 ZNF503Q96F45 646 aa12.06□□□□□ -0.48
COL9A1-210ENST00000493682 C20orf144Q9BQM9 153 aa12.06□□□□□ -0.48
COL9A1-210ENST00000493682 PARD6GQ9BYG4 376 aaPredicted RBP12.06□□□□□ -0.48
COL9A1-210ENST00000493682 RNF24Q9Y225 148 aa12.06□□□□□ -0.48
COL9A1-210ENST00000493682 ZNF701M0R085 212 aaPredicted RBP12.05□□□□□ -0.48
COL9A1-210ENST00000493682 TTC32Q5I0X7 151 aa12.05□□□□□ -0.48
COL9A1-210ENST00000493682 PXDC1Q5TGL8 231 aa12.05□□□□□ -0.48
COL9A1-210ENST00000493682 TEPPQ6URK8 271 aa12.05□□□□□ -0.48
COL9A1-210ENST00000493682 LCN15Q6UWW0 184 aa12.05□□□□□ -0.48
COL9A1-210ENST00000493682 OR10P1Q8NGE3 313 aa12.05□□□□□ -0.48
COL9A1-210ENST00000493682 SLC50A1Q9BRV3 221 aa12.05□□□□□ -0.48
COL9A1-210ENST00000493682 MGAT4CQ9UBM8 478 aa12.05□□□□□ -0.48
COL9A1-210ENST00000493682 A0A0J9YY99 117 aa12.04□□□□□ -0.48
COL9A1-210ENST00000493682 PRAC2D3DTV9 90 aa12.04□□□□□ -0.48
COL9A1-210ENST00000493682 HOXA5P20719 270 aa12.04□□□□□ -0.48
COL9A1-210ENST00000493682 GFI1BQ5VTD9 330 aa12.04□□□□□ -0.48
COL9A1-210ENST00000493682 LINC00305Q7Z4B0 112 aa12.04□□□□□ -0.48
COL9A1-210ENST00000493682 CCDC28AQ8IWP9 274 aa12.04□□□□□ -0.48
COL9A1-210ENST00000493682 Q9H3A6 140 aa12.04□□□□□ -0.48
COL9A1-210ENST00000493682 GAGE12BA1L429 117 aa12.03□□□□□ -0.48
COL9A1-210ENST00000493682 SLC17A3O00476 420 aa12.03□□□□□ -0.48
COL9A1-210ENST00000493682 GOSR2O14653 212 aa12.03□□□□□ -0.48
COL9A1-210ENST00000493682 GAGE7O76087 117 aa12.03□□□□□ -0.48
COL9A1-210ENST00000493682 GAGE12FP0CL80 117 aa12.03□□□□□ -0.48
COL9A1-210ENST00000493682 GAGE12GP0CL81 117 aa12.03□□□□□ -0.48
COL9A1-210ENST00000493682 GAGE12IP0CL82 117 aa12.03□□□□□ -0.48
COL9A1-210ENST00000493682 ESRGQ1W209 222 aa12.03□□□□□ -0.48
COL9A1-210ENST00000493682 ZNF546Q86UE3 836 aa12.03□□□□□ -0.48
COL9A1-210ENST00000493682 UPK3BQ9BT76 320 aa12.03□□□□□ -0.48
COL9A1-210ENST00000493682 FLVCR2Q9UPI3 526 aa12.03□□□□□ -0.48
COL9A1-210ENST00000493682 H3BTX0 84 aa12.02□□□□□ -0.49
COL9A1-210ENST00000493682 AGPAT2O15120 278 aa12.02□□□□□ -0.49
COL9A1-210ENST00000493682 TSC22D2O75157 780 aa12.02□□□□□ -0.49
COL9A1-210ENST00000493682 NDUFB6O95139 128 aa12.02□□□□□ -0.49
COL9A1-210ENST00000493682 SCGB1D2O95969 90 aa12.02□□□□□ -0.49
COL9A1-210ENST00000493682 RLN2P04090 185 aa12.02□□□□□ -0.49
COL9A1-210ENST00000493682 S100A5P33763 92 aa12.02□□□□□ -0.49
COL9A1-210ENST00000493682 KRTAP10-2P60368 255 aa12.02□□□□□ -0.49
COL9A1-210ENST00000493682 ARL16Q0P5N6 197 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms