RNA–Protein interactions for RNA: ENST00000493608.1

COL6A3-214, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 2

Gene COL6A3, Length 742 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-214ENST00000493608 PLP1P60201 277 aa7.66□□□□□ -1.18
COL6A3-214ENST00000493608 S100A10P60903 97 aa7.66□□□□□ -1.18
COL6A3-214ENST00000493608 RAB32Q13637 225 aa7.66□□□□□ -1.18
COL6A3-214ENST00000493608 C12orf74Q32Q52 190 aa7.66□□□□□ -1.18
COL6A3-214ENST00000493608 MZT2BQ6NZ67 158 aa7.66□□□□□ -1.18
COL6A3-214ENST00000493608 ZNF705AQ6ZN79 300 aaPredicted RBP7.66□□□□□ -1.18
COL6A3-214ENST00000493608 S100ZQ8WXG8 99 aa7.66□□□□□ -1.18
COL6A3-214ENST00000493608 GPR82Q96P67 336 aa7.66□□□□□ -1.18
COL6A3-214ENST00000493608 MGST2Q99735 147 aa7.66□□□□□ -1.18
COL6A3-214ENST00000493608 KRTAP4-11Q9BYQ6 195 aa7.66□□□□□ -1.18
COL6A3-214ENST00000493608 ARV1Q9H2C2 271 aa7.66□□□□□ -1.18
COL6A3-214ENST00000493608 HRH4Q9H3N8 390 aa7.66□□□□□ -1.18
COL6A3-214ENST00000493608 ZNF705FA8MVS1 300 aaPredicted RBP7.65□□□□□ -1.18
COL6A3-214ENST00000493608 C11orf94C9JXX5 98 aa7.65□□□□□ -1.18
COL6A3-214ENST00000493608 FNDC10F2Z333 226 aa7.65□□□□□ -1.18
COL6A3-214ENST00000493608 SIX6O95475 246 aa7.65□□□□□ -1.18
COL6A3-214ENST00000493608 PRM2P04554 102 aa7.65□□□□□ -1.18
COL6A3-214ENST00000493608 S100A7P31151 101 aa7.65□□□□□ -1.18
COL6A3-214ENST00000493608 IFITM3Q01628 133 aa7.65□□□□□ -1.18
COL6A3-214ENST00000493608 ASAH1Q13510 395 aa7.65□□□□□ -1.18
COL6A3-214ENST00000493608 SAMD13Q5VXD3 122 aa7.65□□□□□ -1.18
COL6A3-214ENST00000493608 SPATA31B1PQ5VZV4 182 aa7.65□□□□□ -1.18
COL6A3-214ENST00000493608 C1orf158Q8N1D5 194 aa7.65□□□□□ -1.18
COL6A3-214ENST00000493608 ZNF738Q8NE65 137 aa7.65□□□□□ -1.18
COL6A3-214ENST00000493608 LRRC20Q8TCA0 184 aa7.65□□□□□ -1.18
COL6A3-214ENST00000493608 C11orf1Q9H5F2 150 aa7.65□□□□□ -1.18
COL6A3-214ENST00000493608 APLNQ9ULZ1 77 aa7.65□□□□□ -1.18
COL6A3-214ENST00000493608 EPPK1P58107 5090 aaKnown RBP7.64□□□□□ -1.19
COL6A3-214ENST00000493608 TRAV10A0A0B4J240 114 aa7.64□□□□□ -1.19
COL6A3-214ENST00000493608 H3BTX0 84 aa7.64□□□□□ -1.19
COL6A3-214ENST00000493608 M0R2Z0 102 aa7.64□□□□□ -1.19
COL6A3-214ENST00000493608 RPL7P18124 248 aaKnown RBP7.64□□□□□ -1.19
COL6A3-214ENST00000493608 CNN1P51911 297 aaKnown RBP7.64□□□□□ -1.19
COL6A3-214ENST00000493608 IL15RAQ13261 267 aa7.64□□□□□ -1.19
COL6A3-214ENST00000493608 SPINK13Q1W4C9 94 aa7.64□□□□□ -1.19
COL6A3-214ENST00000493608 MORN5Q5VZ52 161 aa7.64□□□□□ -1.19
COL6A3-214ENST00000493608 MIC13Q5XKP0 118 aa7.64□□□□□ -1.19
COL6A3-214ENST00000493608 LGALS9CQ6DKI2 356 aa7.64□□□□□ -1.19
COL6A3-214ENST00000493608 LINC00299Q6ZSB3 139 aa7.64□□□□□ -1.19
COL6A3-214ENST00000493608 LINC00305Q7Z4B0 112 aa7.64□□□□□ -1.19
COL6A3-214ENST00000493608 NRARPQ7Z6K4 114 aa7.64□□□□□ -1.19
COL6A3-214ENST00000493608 CLUHP3Q96NS8 147 aa7.64□□□□□ -1.19
COL6A3-214ENST00000493608 GGACTQ9BVM4 153 aa7.64□□□□□ -1.19
COL6A3-214ENST00000493608 DEFB131BA0A096LNP1 70 aa7.63□□□□□ -1.19
COL6A3-214ENST00000493608 TRAV5A0A0B4J249 113 aa7.63□□□□□ -1.19
COL6A3-214ENST00000493608 IGSF23A1L1A6 192 aa7.63□□□□□ -1.19
COL6A3-214ENST00000493608 COX7A2P2O60397 106 aa7.63□□□□□ -1.19
COL6A3-214ENST00000493608 UPK1BO75841 260 aa7.63□□□□□ -1.19
COL6A3-214ENST00000493608 CXCL3P19876 107 aa7.63□□□□□ -1.19
COL6A3-214ENST00000493608 PVALBP20472 110 aaPredicted RBP7.63□□□□□ -1.19
COL6A3-214ENST00000493608 HOXA5P20719 270 aa7.63□□□□□ -1.19
COL6A3-214ENST00000493608 CAMLGP49069 296 aa7.63□□□□□ -1.19
COL6A3-214ENST00000493608 AMTNQ6UX39 209 aa7.63□□□□□ -1.19
COL6A3-214ENST00000493608 ZNF546Q86UE3 836 aa7.63□□□□□ -1.19
COL6A3-214ENST00000493608 OR11H7Q8NGC8 314 aa7.63□□□□□ -1.19
COL6A3-214ENST00000493608 ENKURQ8TC29 256 aa7.63□□□□□ -1.19
COL6A3-214ENST00000493608 TMEM37Q8WXS4 190 aa7.63□□□□□ -1.19
COL6A3-214ENST00000493608 NEU1Q99519 415 aa7.63□□□□□ -1.19
COL6A3-214ENST00000493608 GOLT1BQ9Y3E0 138 aa7.63□□□□□ -1.19
COL6A3-214ENST00000493608 IGHV4-4A0A075B6R2 117 aa7.62□□□□□ -1.19
COL6A3-214ENST00000493608 TRAV12-2A0A075B6T6 113 aa7.62□□□□□ -1.19
COL6A3-214ENST00000493608 A0A087X0K7 114 aa7.62□□□□□ -1.19
COL6A3-214ENST00000493608 UBE2L5PA0A1B0GUS4 154 aa7.62□□□□□ -1.19
COL6A3-214ENST00000493608 SMIM9A6NGZ8 99 aa7.62□□□□□ -1.19
COL6A3-214ENST00000493608 A8MTW9 85 aa7.62□□□□□ -1.19
COL6A3-214ENST00000493608 ZNF705GA8MUZ8 300 aaPredicted RBP7.62□□□□□ -1.19
COL6A3-214ENST00000493608 MRPS12O15235 138 aaKnown RBP7.62□□□□□ -1.19
COL6A3-214ENST00000493608 DUSP14O95147 198 aaKnown RBP7.62□□□□□ -1.19
COL6A3-214ENST00000493608 SPART-AS1P0CW21 52 aa7.62□□□□□ -1.19
COL6A3-214ENST00000493608 SULT1A1P50225 295 aa7.62□□□□□ -1.19
COL6A3-214ENST00000493608 RHOBP62745 196 aa7.62□□□□□ -1.19
COL6A3-214ENST00000493608 HIST1H1AQ02539 215 aaPredicted RBP7.62□□□□□ -1.19
COL6A3-214ENST00000493608 KIR3DS1Q14943 382 aa7.62□□□□□ -1.19
COL6A3-214ENST00000493608 PSG3Q16557 428 aa7.62□□□□□ -1.19
COL6A3-214ENST00000493608 FAM222AQ5U5X8 452 aa7.62□□□□□ -1.19
COL6A3-214ENST00000493608 C10orf113Q5VZT2 155 aa7.62□□□□□ -1.19
COL6A3-214ENST00000493608 BAP18Q8IXM2 172 aa7.62□□□□□ -1.19
COL6A3-214ENST00000493608 TMEM252Q8N6L7 170 aa7.62□□□□□ -1.19
COL6A3-214ENST00000493608 TMEM208Q9BTX3 173 aa7.62□□□□□ -1.19
COL6A3-214ENST00000493608 DNAJC4Q9NNZ3 241 aa7.62□□□□□ -1.19
COL6A3-214ENST00000493608 LYRM2Q9NU23 88 aaPredicted RBP7.62□□□□□ -1.19
COL6A3-214ENST00000493608 UQCC1Q9NVA1 299 aa7.62□□□□□ -1.19
COL6A3-214ENST00000493608 RFNGQ9Y644 331 aa7.62□□□□□ -1.19
COL6A3-214ENST00000493608 LOC102723971A0A1B0GUV8 181 aa7.61□□□□□ -1.19
COL6A3-214ENST00000493608 CRXO43186 299 aaPredicted RBP7.61□□□□□ -1.19
COL6A3-214ENST00000493608 HBE1P02100 147 aa7.61□□□□□ -1.19
COL6A3-214ENST00000493608 HTN3P15516 51 aa7.61□□□□□ -1.19
COL6A3-214ENST00000493608 SRSF3P84103 164 aaKnown RBP7.61□□□□□ -1.19
COL6A3-214ENST00000493608 NHLH2Q02577 135 aa7.61□□□□□ -1.19
COL6A3-214ENST00000493608 BAXQ07812 192 aa7.61□□□□□ -1.19
COL6A3-214ENST00000493608 RAB31Q13636 194 aa7.61□□□□□ -1.19
COL6A3-214ENST00000493608 OPCMLQ14982 345 aa7.61□□□□□ -1.19
COL6A3-214ENST00000493608 RRN3P1Q2M238 152 aa7.61□□□□□ -1.19
COL6A3-214ENST00000493608 LCE5AQ5TCM9 118 aa7.61□□□□□ -1.19
COL6A3-214ENST00000493608 PXDC1Q5TGL8 231 aa7.61□□□□□ -1.19
COL6A3-214ENST00000493608 Q6ZRG5 221 aa7.61□□□□□ -1.19
COL6A3-214ENST00000493608 S100A7AQ86SG5 101 aa7.61□□□□□ -1.19
COL6A3-214ENST00000493608 BPIFA4PQ86YQ2 179 aa7.61□□□□□ -1.19
COL6A3-214ENST00000493608 OR8A1Q8NGG7 326 aa7.61□□□□□ -1.19
COL6A3-214ENST00000493608 RPUSD4Q96CM3 377 aaKnown RBP7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms