RNA–Protein interactions for RNA: ENST00000493430.5

PTCD3-218, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 782 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-218ENST00000493430 SPIN2AQ99865 258 aa1.99□□□□□ -2.09
PTCD3-218ENST00000493430 SPIN2BQ9BPZ2 258 aa1.99□□□□□ -2.09
PTCD3-218ENST00000493430 RTBDNQ9BSG5 229 aaPredicted RBP1.99□□□□□ -2.09
PTCD3-218ENST00000493430 COMMD5Q9GZQ3 224 aa1.99□□□□□ -2.09
PTCD3-218ENST00000493430 C6orf62Q9GZU0 229 aaPredicted RBP1.99□□□□□ -2.09
PTCD3-218ENST00000493430 VCX3BQ9H321 246 aa1.99□□□□□ -2.09
PTCD3-218ENST00000493430 Q9HAA7 133 aa1.99□□□□□ -2.09
PTCD3-218ENST00000493430 NDUFA4L2Q9NRX3 87 aa1.99□□□□□ -2.09
PTCD3-218ENST00000493430 BET1LQ9NYM9 111 aa1.99□□□□□ -2.09
PTCD3-218ENST00000493430 SIGLEC8Q9NYZ4 499 aa1.99□□□□□ -2.09
PTCD3-218ENST00000493430 PRELID3BQ9Y3B1 194 aa1.99□□□□□ -2.09
PTCD3-218ENST00000493430 F11RQ9Y624 299 aaKnown RBP1.99□□□□□ -2.09
PTCD3-218ENST00000493430 A0A087WXM4 84 aa1.98□□□□□ -2.09
PTCD3-218ENST00000493430 IGHV7-4-1A0A0J9YVY3 117 aa1.98□□□□□ -2.09
PTCD3-218ENST00000493430 SERTM2A0A1B0GWG4 89 aa1.98□□□□□ -2.09
PTCD3-218ENST00000493430 TNFAIP8O95379 198 aa1.98□□□□□ -2.09
PTCD3-218ENST00000493430 RAB3DO95716 219 aa1.98□□□□□ -2.09
PTCD3-218ENST00000493430 HPRT1P00492 218 aa1.98□□□□□ -2.09
PTCD3-218ENST00000493430 ANXA3P12429 323 aa1.98□□□□□ -2.09
PTCD3-218ENST00000493430 NQO2P16083 231 aa1.98□□□□□ -2.09
PTCD3-218ENST00000493430 RCVRNP35243 200 aa1.98□□□□□ -2.09
PTCD3-218ENST00000493430 RND2P52198 227 aa1.98□□□□□ -2.09
PTCD3-218ENST00000493430 TAS2R31P59538 309 aa1.98□□□□□ -2.09
PTCD3-218ENST00000493430 SEC61GP60059 68 aa1.98□□□□□ -2.09
PTCD3-218ENST00000493430 TSPAN5P62079 268 aa1.98□□□□□ -2.09
PTCD3-218ENST00000493430 CXCL6P80162 114 aa1.98□□□□□ -2.09
PTCD3-218ENST00000493430 ZNF90Q03938 601 aa1.98□□□□□ -2.09
PTCD3-218ENST00000493430 CATR1Q13166 79 aa1.98□□□□□ -2.09
PTCD3-218ENST00000493430 IL18Q14116 193 aa1.98□□□□□ -2.09
PTCD3-218ENST00000493430 POU2AF1Q16633 256 aa1.98□□□□□ -2.09
PTCD3-218ENST00000493430 TRIM16LQ309B1 348 aa1.98□□□□□ -2.09
PTCD3-218ENST00000493430 CNPY1Q3B7I2 92 aa1.98□□□□□ -2.09
PTCD3-218ENST00000493430 RNASE10Q5GAN6 216 aaKnown RBP1.98□□□□□ -2.09
PTCD3-218ENST00000493430 LCN12Q6JVE5 192 aa1.98□□□□□ -2.09
PTCD3-218ENST00000493430 H2BFWTQ7Z2G1 175 aa1.98□□□□□ -2.09
PTCD3-218ENST00000493430 LYZL2Q7Z4W2 148 aa1.98□□□□□ -2.09
PTCD3-218ENST00000493430 TMED4Q7Z7H5 227 aa1.98□□□□□ -2.09
PTCD3-218ENST00000493430 TPRA1Q86W33 373 aa1.98□□□□□ -2.09
PTCD3-218ENST00000493430 SELENOHQ8IZQ5 122 aaKnown RBP1.98□□□□□ -2.09
PTCD3-218ENST00000493430 Q8N402 240 aa1.98□□□□□ -2.09
PTCD3-218ENST00000493430 SLC35G3Q8N808 338 aa1.98□□□□□ -2.09
PTCD3-218ENST00000493430 OR51S1Q8NGJ8 323 aa1.98□□□□□ -2.09
PTCD3-218ENST00000493430 OR4D5Q8NGN0 318 aa1.98□□□□□ -2.09
PTCD3-218ENST00000493430 OR1L6Q8NGR2 347 aa1.98□□□□□ -2.09
PTCD3-218ENST00000493430 OR1L8Q8NGR8 309 aa1.98□□□□□ -2.09
PTCD3-218ENST00000493430 RNASE11Q8TAA1 199 aaKnown RBP1.98□□□□□ -2.09
PTCD3-218ENST00000493430 DYNC2LI1Q8TCX1 351 aa1.98□□□□□ -2.09
PTCD3-218ENST00000493430 LSM10Q969L4 123 aaKnown RBP1.98□□□□□ -2.09
PTCD3-218ENST00000493430 GPR146Q96CH1 333 aa1.98□□□□□ -2.09
PTCD3-218ENST00000493430 S100A16Q96FQ6 103 aaKnown RBP1.98□□□□□ -2.09
PTCD3-218ENST00000493430 ACY3Q96HD9 319 aa1.98□□□□□ -2.09
PTCD3-218ENST00000493430 RHPN1-AS1Q9BWJ2 59 aa1.98□□□□□ -2.09
PTCD3-218ENST00000493430 GGTLC1Q9BX51 225 aa1.98□□□□□ -2.09
PTCD3-218ENST00000493430 ZNF436Q9C0F3 470 aaPredicted RBP1.98□□□□□ -2.09
PTCD3-218ENST00000493430 Q9H521 79 aa1.98□□□□□ -2.09
PTCD3-218ENST00000493430 DIABLOQ9NR28 239 aa1.98□□□□□ -2.09
PTCD3-218ENST00000493430 C21orf62Q9NYP8 219 aa1.98□□□□□ -2.09
PTCD3-218ENST00000493430 COMMD9Q9P000 198 aa1.98□□□□□ -2.09
PTCD3-218ENST00000493430 DOK5Q9P104 306 aa1.98□□□□□ -2.09
PTCD3-218ENST00000493430 RABAC1Q9UI14 185 aa1.98□□□□□ -2.09
PTCD3-218ENST00000493430 FLVCR2Q9UPI3 526 aa1.98□□□□□ -2.09
PTCD3-218ENST00000493430 RNF24Q9Y225 148 aa1.98□□□□□ -2.09
PTCD3-218ENST00000493430 CHTOPQ9Y3Y2 248 aaKnown RBP1.98□□□□□ -2.09
PTCD3-218ENST00000493430 PUS1Q9Y606 427 aaKnown RBP eCLIP1.98□□□□□ -2.09
PTCD3-218ENST00000493430 V9GYH0 126 aa1.98□□□□□ -2.09
PTCD3-218ENST00000493430 KMT2AQ03164 3969 aa1.97□□□□□ -2.09
PTCD3-218ENST00000493430 IGLV2-18A0A075B6J9 118 aa1.97□□□□□ -2.09
PTCD3-218ENST00000493430 IGKV1D-37A0A075B6S9 117 aa1.97□□□□□ -2.09
PTCD3-218ENST00000493430 IGHV3OR16-12A0A075B7B8 117 aa1.97□□□□□ -2.09
PTCD3-218ENST00000493430 IGKV1OR2-108A0A075B7D4 117 aa1.97□□□□□ -2.09
PTCD3-218ENST00000493430 LOC102724200A0A096LPH7 203 aaPredicted RBP1.97□□□□□ -2.09
PTCD3-218ENST00000493430 A0A0G2JLM5 398 aa1.97□□□□□ -2.09
PTCD3-218ENST00000493430 C3orf85A0A1B0GTC6 90 aa1.97□□□□□ -2.09
PTCD3-218ENST00000493430 CCDC160A6NGH7 325 aa1.97□□□□□ -2.09
PTCD3-218ENST00000493430 FAM74A7A6NL05 159 aa1.97□□□□□ -2.09
PTCD3-218ENST00000493430 H0Y980 276 aa1.97□□□□□ -2.09
PTCD3-218ENST00000493430 C3orf84H3BNL1 204 aa1.97□□□□□ -2.09
PTCD3-218ENST00000493430 H3BUA1 57 aa1.97□□□□□ -2.09
PTCD3-218ENST00000493430 M0R2N4 97 aa1.97□□□□□ -2.09
PTCD3-218ENST00000493430 LGALS9O00182 355 aa1.97□□□□□ -2.09
PTCD3-218ENST00000493430 WRBO00258 174 aa1.97□□□□□ -2.09
PTCD3-218ENST00000493430 GNG7O60262 68 aa1.97□□□□□ -2.09
PTCD3-218ENST00000493430 ADAP1O75689 374 aa1.97□□□□□ -2.09
PTCD3-218ENST00000493430 SNAPC5O75971 98 aa1.97□□□□□ -2.09
PTCD3-218ENST00000493430 CA1P00915 261 aaPredicted RBP1.97□□□□□ -2.09
PTCD3-218ENST00000493430 HRASP01112 189 aa1.97□□□□□ -2.09
PTCD3-218ENST00000493430 IFNA17P01571 189 aa1.97□□□□□ -2.09
PTCD3-218ENST00000493430 IGKV1-17P01599 117 aa1.97□□□□□ -2.09
PTCD3-218ENST00000493430 APOA1P02647 267 aa1.97□□□□□ -2.09
PTCD3-218ENST00000493430 C8orf88P0DMB2 117 aa1.97□□□□□ -2.09
PTCD3-218ENST00000493430 AKR1C4P17516 323 aa1.97□□□□□ -2.09
PTCD3-218ENST00000493430 UCP1P25874 307 aa1.97□□□□□ -2.09
PTCD3-218ENST00000493430 CD40LGP29965 261 aa1.97□□□□□ -2.09
PTCD3-218ENST00000493430 SLC6A1P30531 599 aa1.97□□□□□ -2.09
PTCD3-218ENST00000493430 MAS1LP35410 378 aa1.97□□□□□ -2.09
PTCD3-218ENST00000493430 ID1P41134 155 aa1.97□□□□□ -2.09
PTCD3-218ENST00000493430 OPRK1P41145 380 aa1.97□□□□□ -2.09
PTCD3-218ENST00000493430 P2RY1P47900 373 aa1.97□□□□□ -2.09
PTCD3-218ENST00000493430 INSL3P51460 131 aa1.97□□□□□ -2.09
PTCD3-218ENST00000493430 EMP1P54849 157 aa1.97□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms