RNA–Protein interactions for RNA: ENST00000493387.5

LSM2-214, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5

Gene LSM2, Length 767 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-214ENST00000493387 C16orf92Q96LL3 132 aa8.66□□□□□ -1.02
LSM2-214ENST00000493387 SLC50A1Q9BRV3 221 aa8.66□□□□□ -1.02
LSM2-214ENST00000493387 TMEM167BQ9NRX6 74 aa8.66□□□□□ -1.02
LSM2-214ENST00000493387 MAP1LC3B2A6NCE7 125 aa8.65□□□□□ -1.02
LSM2-214ENST00000493387 H3BQ15 152 aa8.65□□□□□ -1.02
LSM2-214ENST00000493387 IFNA7P01567 189 aa8.65□□□□□ -1.02
LSM2-214ENST00000493387 HBE1P02100 147 aa8.65□□□□□ -1.02
LSM2-214ENST00000493387 H2AFB1P0C5Y9 115 aa8.65□□□□□ -1.02
LSM2-214ENST00000493387 ARL14EPLP0DKL9 152 aa8.65□□□□□ -1.02
LSM2-214ENST00000493387 PYYP10082 97 aa8.65□□□□□ -1.02
LSM2-214ENST00000493387 PSMB3P49720 205 aa8.65□□□□□ -1.02
LSM2-214ENST00000493387 BLOC1S1P78537 153 aa8.65□□□□□ -1.02
LSM2-214ENST00000493387 PSG9Q00887 426 aa8.65□□□□□ -1.02
LSM2-214ENST00000493387 ZNF726P1Q15940 193 aa8.65□□□□□ -1.02
LSM2-214ENST00000493387 ALKAL2Q6UX46 152 aa8.65□□□□□ -1.02
LSM2-214ENST00000493387 FXYD5Q96DB9 178 aa8.65□□□□□ -1.02
LSM2-214ENST00000493387 MAP1LC3BQ9GZQ8 125 aa8.65□□□□□ -1.02
LSM2-214ENST00000493387 ZNF586Q9NXT0 402 aa8.65□□□□□ -1.02
LSM2-214ENST00000493387 TRBV19A0A075B6N1 114 aa8.64□□□□□ -1.03
LSM2-214ENST00000493387 TRAV1-1A0A0B4J248 108 aa8.64□□□□□ -1.03
LSM2-214ENST00000493387 ZNF705EA8MWA4 302 aaPredicted RBP8.64□□□□□ -1.03
LSM2-214ENST00000493387 SOCS3O14543 225 aa8.64□□□□□ -1.03
LSM2-214ENST00000493387 HMGB3O15347 200 aaKnown RBP8.64□□□□□ -1.03
LSM2-214ENST00000493387 GCHFRP30047 84 aa8.64□□□□□ -1.03
LSM2-214ENST00000493387 FHITP49789 147 aa8.64□□□□□ -1.03
LSM2-214ENST00000493387 KRTAP10-11P60412 298 aa8.64□□□□□ -1.03
LSM2-214ENST00000493387 TEX261Q6UWH6 196 aa8.64□□□□□ -1.03
LSM2-214ENST00000493387 LYPD1Q8N2G4 141 aa8.64□□□□□ -1.03
LSM2-214ENST00000493387 SFT2D1Q8WV19 159 aa8.64□□□□□ -1.03
LSM2-214ENST00000493387 SAT2Q96F10 170 aaPredicted RBP8.64□□□□□ -1.03
LSM2-214ENST00000493387 ZNF503Q96F45 646 aa8.64□□□□□ -1.03
LSM2-214ENST00000493387 AAMDCQ9H7C9 122 aa8.64□□□□□ -1.03
LSM2-214ENST00000493387 ZNF331Q9NQX6 463 aaPredicted RBP8.64□□□□□ -1.03
LSM2-214ENST00000493387 PRELID1Q9Y255 219 aa8.64□□□□□ -1.03
LSM2-214ENST00000493387 TRRAPQ9Y4A5 3859 aa8.63□□□□□ -1.03
LSM2-214ENST00000493387 OR11H12B2RN74 326 aa8.63□□□□□ -1.03
LSM2-214ENST00000493387 OR10J4P0C629 311 aa8.63□□□□□ -1.03
LSM2-214ENST00000493387 PPT1P50897 306 aa8.63□□□□□ -1.03
LSM2-214ENST00000493387 CD81P60033 236 aa8.63□□□□□ -1.03
LSM2-214ENST00000493387 FAM74A1Q5RGS3 127 aa8.63□□□□□ -1.03
LSM2-214ENST00000493387 ZNF680Q8NEM1 530 aa8.63□□□□□ -1.03
LSM2-214ENST00000493387 SUN5Q8TC36 379 aa8.63□□□□□ -1.03
LSM2-214ENST00000493387 BLNKQ8WV28 456 aa8.63□□□□□ -1.03
LSM2-214ENST00000493387 C17orf77Q96MU5 243 aa8.63□□□□□ -1.03
LSM2-214ENST00000493387 EIF3GO75821 320 aaKnown RBP eCLIP8.62□□□□□ -1.03
LSM2-214ENST00000493387 ZNF688P0C7X2 276 aa8.62□□□□□ -1.03
LSM2-214ENST00000493387 PSMG4Q5JS54 123 aa8.62□□□□□ -1.03
LSM2-214ENST00000493387 SSX7Q7RTT5 188 aa8.62□□□□□ -1.03
LSM2-214ENST00000493387 IQCF2Q8IXL9 164 aa8.62□□□□□ -1.03
LSM2-214ENST00000493387 MRPL53Q96EL3 112 aaKnown RBP8.62□□□□□ -1.03
LSM2-214ENST00000493387 LINC00052Q96N35 136 aa8.62□□□□□ -1.03
LSM2-214ENST00000493387 NKX6-2Q9C056 277 aaPredicted RBP8.62□□□□□ -1.03
LSM2-214ENST00000493387 UBQLN2Q9UHD9 624 aa8.62□□□□□ -1.03
LSM2-214ENST00000493387 MGAM2Q2M2H8 2515 aa8.62□□□□□ -1.03
LSM2-214ENST00000493387 TRAV8-2A0A0B4J237 113 aa8.61□□□□□ -1.03
LSM2-214ENST00000493387 NDUFB4O95168 129 aa8.61□□□□□ -1.03
LSM2-214ENST00000493387 SNRPCP09234 159 aaKnown RBP8.61□□□□□ -1.03
LSM2-214ENST00000493387 CD7P09564 240 aa8.61□□□□□ -1.03
LSM2-214ENST00000493387 FGF8P55075 233 aaPredicted RBP8.61□□□□□ -1.03
LSM2-214ENST00000493387 DEFB131AP59861 70 aa8.61□□□□□ -1.03
LSM2-214ENST00000493387 PSG3Q16557 428 aa8.61□□□□□ -1.03
LSM2-214ENST00000493387 ARL6IP6Q8N6S5 226 aa8.61□□□□□ -1.03
LSM2-214ENST00000493387 PRR25Q96S07 402 aa8.61□□□□□ -1.03
LSM2-214ENST00000493387 MAP6D1Q9H9H5 199 aa8.61□□□□□ -1.03
LSM2-214ENST00000493387 OTORQ9NRC9 128 aa8.61□□□□□ -1.03
LSM2-214ENST00000493387 ARL2-SNX15V9GYD0 113 aa8.61□□□□□ -1.03
LSM2-214ENST00000493387 VWFP04275 2813 aa8.61□□□□□ -1.03
LSM2-214ENST00000493387 A0A1W2PRE2 83 aa8.6□□□□□ -1.03
LSM2-214ENST00000493387 H3BTX0 84 aa8.6□□□□□ -1.03
LSM2-214ENST00000493387 SLC17A3O00476 420 aa8.6□□□□□ -1.03
LSM2-214ENST00000493387 CSN1S1P47710 185 aa8.6□□□□□ -1.03
LSM2-214ENST00000493387 RANP62826 216 aaKnown RBP8.6□□□□□ -1.03
LSM2-214ENST00000493387 ODF3L2Q3SX64 289 aa8.6□□□□□ -1.03
LSM2-214ENST00000493387 Q8N1Y9 231 aa8.6□□□□□ -1.03
LSM2-214ENST00000493387 FAM24BQ8N5W8 94 aa8.6□□□□□ -1.03
LSM2-214ENST00000493387 ZNF738Q8NE65 137 aa8.6□□□□□ -1.03
LSM2-214ENST00000493387 RXFP4Q8TDU9 374 aa8.6□□□□□ -1.03
LSM2-214ENST00000493387 Q9H3A6 140 aa8.6□□□□□ -1.03
LSM2-214ENST00000493387 C19orf73Q9NVV2 129 aa8.6□□□□□ -1.03
LSM2-214ENST00000493387 IFNA1P01562 189 aa8.59□□□□□ -1.03
LSM2-214ENST00000493387 TAGLN2P37802 199 aaKnown RBP8.59□□□□□ -1.03
LSM2-214ENST00000493387 PMS2P11Q13670 270 aa8.59□□□□□ -1.03
LSM2-214ENST00000493387 ICAM4Q14773 271 aa8.59□□□□□ -1.03
LSM2-214ENST00000493387 EBLN2Q6P2I7 272 aa8.59□□□□□ -1.03
LSM2-214ENST00000493387 FOXI2Q6ZQN5 318 aa8.59□□□□□ -1.03
LSM2-214ENST00000493387 ZNF767PQ75MW2 155 aa8.59□□□□□ -1.03
LSM2-214ENST00000493387 CMTM2Q8TAZ6 248 aa8.59□□□□□ -1.03
LSM2-214ENST00000493387 C20orf173Q96LM9 149 aa8.59□□□□□ -1.03
LSM2-214ENST00000493387 TMPRSS5Q9H3S3 457 aa8.59□□□□□ -1.03
LSM2-214ENST00000493387 TUBA4BQ9H853 241 aa8.59□□□□□ -1.03
LSM2-214ENST00000493387 AURKAIP1Q9NWT8 199 aaPredicted RBP8.59□□□□□ -1.03
LSM2-214ENST00000493387 PGPA6NDG6 321 aa8.58□□□□□ -1.04
LSM2-214ENST00000493387 A8MZ25 164 aa8.58□□□□□ -1.04
LSM2-214ENST00000493387 DUSP14O95147 198 aaKnown RBP8.58□□□□□ -1.04
LSM2-214ENST00000493387 RAB14P61106 215 aa8.58□□□□□ -1.04
LSM2-214ENST00000493387 IGFL4Q6B9Z1 124 aa8.58□□□□□ -1.04
LSM2-214ENST00000493387 EXOC3-AS1Q8N2X6 119 aa8.58□□□□□ -1.04
LSM2-214ENST00000493387 RNF182Q8N6D2 247 aa8.58□□□□□ -1.04
LSM2-214ENST00000493387 LYPD6BQ8NI32 183 aa8.58□□□□□ -1.04
LSM2-214ENST00000493387 RPUSD4Q96CM3 377 aaKnown RBP8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms