RNA–Protein interactions for RNA: ENST00000491128.5

SMPD4-219, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 2,570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-219ENST00000491128 F6UZH7 168 aa10.68□□□□□ -0.7
SMPD4-219ENST00000491128 H3BUA1 57 aa10.68□□□□□ -0.7
SMPD4-219ENST00000491128 BUB3O43684 328 aa10.68□□□□□ -0.7
SMPD4-219ENST00000491128 SLC35B1P78383 322 aa10.68□□□□□ -0.7
SMPD4-219ENST00000491128 RELQ04864 619 aaPredicted RBP10.68□□□□□ -0.7
SMPD4-219ENST00000491128 PEF1Q9UBV8 284 aaKnown RBP10.68□□□□□ -0.7
SMPD4-219ENST00000491128 TRBV19A0A075B6N1 114 aa10.67□□□□□ -0.7
SMPD4-219ENST00000491128 ISLRO14498 428 aa10.67□□□□□ -0.7
SMPD4-219ENST00000491128 RNF212Q495C1 297 aa10.67□□□□□ -0.7
SMPD4-219ENST00000491128 GAR1Q9NY12 217 aaKnown RBP10.67□□□□□ -0.7
SMPD4-219ENST00000491128 A0A1W2PRX2 142 aa10.67□□□□□ -0.7
SMPD4-219ENST00000491128 UBE2CO00762 179 aa10.67□□□□□ -0.7
SMPD4-219ENST00000491128 MYCNOSP40205 109 aa10.67□□□□□ -0.7
SMPD4-219ENST00000491128 CENPWQ5EE01 88 aa10.67□□□□□ -0.7
SMPD4-219ENST00000491128 TEX29Q8N6K0 151 aa10.67□□□□□ -0.7
SMPD4-219ENST00000491128 METTL26Q96S19 204 aa10.67□□□□□ -0.7
SMPD4-219ENST00000491128 NIT2Q9NQR4 276 aa10.67□□□□□ -0.7
SMPD4-219ENST00000491128 K7EN84 100 aa10.66□□□□□ -0.7
SMPD4-219ENST00000491128 S100A8P05109 93 aa10.66□□□□□ -0.7
SMPD4-219ENST00000491128 S100A6P06703 90 aa10.66□□□□□ -0.7
SMPD4-219ENST00000491128 RAB5BP61020 215 aa10.66□□□□□ -0.7
SMPD4-219ENST00000491128 LINC01551Q86U37 167 aa10.66□□□□□ -0.7
SMPD4-219ENST00000491128 RNF182Q8N6D2 247 aa10.66□□□□□ -0.7
SMPD4-219ENST00000491128 TMEM14CQ9P0S9 112 aa10.66□□□□□ -0.7
SMPD4-219ENST00000491128 ZNF705FA8MVS1 300 aaPredicted RBP10.66□□□□□ -0.7
SMPD4-219ENST00000491128 PEX7O00628 323 aa10.66□□□□□ -0.7
SMPD4-219ENST00000491128 EPDR1Q9UM22 224 aa10.66□□□□□ -0.7
SMPD4-219ENST00000491128 IGHV4OR15-8A0A075B7B6 117 aa10.65□□□□□ -0.7
SMPD4-219ENST00000491128 A0A087WW49 117 aa10.65□□□□□ -0.7
SMPD4-219ENST00000491128 ZNF785A8K8V0 405 aa10.65□□□□□ -0.7
SMPD4-219ENST00000491128 SIGLEC15Q6ZMC9 328 aa10.65□□□□□ -0.7
SMPD4-219ENST00000491128 Q8N2B8 174 aa10.65□□□□□ -0.7
SMPD4-219ENST00000491128 FAM24BQ8N5W8 94 aa10.65□□□□□ -0.7
SMPD4-219ENST00000491128 C2CD3Q4AC94 2353 aa10.65□□□□□ -0.7
SMPD4-219ENST00000491128 GGCTO75223 188 aaKnown RBP10.65□□□□□ -0.71
SMPD4-219ENST00000491128 GOLT1AQ6ZVE7 132 aa10.65□□□□□ -0.71
SMPD4-219ENST00000491128 TMEM86BQ8N661 226 aa10.65□□□□□ -0.71
SMPD4-219ENST00000491128 C11orf52Q96A22 123 aa10.65□□□□□ -0.71
SMPD4-219ENST00000491128 CDC42EP3Q9UKI2 254 aa10.65□□□□□ -0.71
SMPD4-219ENST00000491128 S100A9P06702 114 aaKnown RBP10.64□□□□□ -0.71
SMPD4-219ENST00000491128 MGST1P10620 155 aaKnown RBP10.64□□□□□ -0.71
SMPD4-219ENST00000491128 SYNJ2BPP57105 145 aa10.64□□□□□ -0.71
SMPD4-219ENST00000491128 RPL11P62913 178 aaKnown RBP10.64□□□□□ -0.71
SMPD4-219ENST00000491128 FOXE3Q13461 319 aa10.64□□□□□ -0.71
SMPD4-219ENST00000491128 RHEBQ15382 184 aa10.64□□□□□ -0.71
SMPD4-219ENST00000491128 ZNF418Q8TF45 676 aaPredicted RBP10.64□□□□□ -0.71
SMPD4-219ENST00000491128 TXNDC17Q9BRA2 123 aa10.64□□□□□ -0.71
SMPD4-219ENST00000491128 NDUFS6O75380 124 aaKnown RBP10.64□□□□□ -0.71
SMPD4-219ENST00000491128 BRI3O95415 125 aa10.64□□□□□ -0.71
SMPD4-219ENST00000491128 RPL7P18124 248 aaKnown RBP10.64□□□□□ -0.71
SMPD4-219ENST00000491128 GNG4P50150 75 aa10.64□□□□□ -0.71
SMPD4-219ENST00000491128 RPEL1Q2QD12 228 aa10.64□□□□□ -0.71
SMPD4-219ENST00000491128 HIST1H2BAQ96A08 127 aa10.64□□□□□ -0.71
SMPD4-219ENST00000491128 NDUFA4O00483 81 aa10.63□□□□□ -0.71
SMPD4-219ENST00000491128 GATCO43716 136 aaKnown RBP10.63□□□□□ -0.71
SMPD4-219ENST00000491128 CMTM2Q8TAZ6 248 aa10.63□□□□□ -0.71
SMPD4-219ENST00000491128 C1orf196B1AJZ1 125 aa10.63□□□□□ -0.71
SMPD4-219ENST00000491128 TCRAP04437 139 aa10.63□□□□□ -0.71
SMPD4-219ENST00000491128 ELANEP08246 267 aa10.63□□□□□ -0.71
SMPD4-219ENST00000491128 SLURP1P55000 103 aa10.63□□□□□ -0.71
SMPD4-219ENST00000491128 DEFB1P60022 68 aa10.63□□□□□ -0.71
SMPD4-219ENST00000491128 PRR27Q6MZM9 219 aa10.63□□□□□ -0.71
SMPD4-219ENST00000491128 C15orf54Q8N8G6 183 aa10.63□□□□□ -0.71
SMPD4-219ENST00000491128 LINC01006Q8NI28 216 aa10.63□□□□□ -0.71
SMPD4-219ENST00000491128 RNASE7Q9H1E1 156 aaKnown RBP10.63□□□□□ -0.71
SMPD4-219ENST00000491128 SMCO4Q9NRQ5 59 aa10.63□□□□□ -0.71
SMPD4-219ENST00000491128 CD28P10747 220 aa10.62□□□□□ -0.71
SMPD4-219ENST00000491128 HILS1P60008 231 aa10.62□□□□□ -0.71
SMPD4-219ENST00000491128 ZNF580Q9UK33 172 aa10.62□□□□□ -0.71
SMPD4-219ENST00000491128 ARL2-SNX15V9GYD0 113 aa10.62□□□□□ -0.71
SMPD4-219ENST00000491128 IGLV2-8P01709 118 aa10.62□□□□□ -0.71
SMPD4-219ENST00000491128 FABP9Q0Z7S8 132 aa10.62□□□□□ -0.71
SMPD4-219ENST00000491128 PNRC1Q12796 327 aaPredicted RBP10.62□□□□□ -0.71
SMPD4-219ENST00000491128 GBGT1Q8N5D6 347 aa10.62□□□□□ -0.71
SMPD4-219ENST00000491128 C5orf17Q8NAS9 161 aa10.62□□□□□ -0.71
SMPD4-219ENST00000491128 TMEM190Q8WZ59 177 aa10.62□□□□□ -0.71
SMPD4-219ENST00000491128 OTORQ9NRC9 128 aa10.62□□□□□ -0.71
SMPD4-219ENST00000491128 IGKV2-40A0A087WW87 121 aaPredicted RBP10.61□□□□□ -0.71
SMPD4-219ENST00000491128 TGIF2-C20orf24A0A0A6YYL0 155 aa10.61□□□□□ -0.71
SMPD4-219ENST00000491128 IGKV2D-40P01614 121 aaPredicted RBP10.61□□□□□ -0.71
SMPD4-219ENST00000491128 RNASE1P07998 156 aaKnown RBP10.61□□□□□ -0.71
SMPD4-219ENST00000491128 HOXD3P31249 432 aaPredicted RBP10.61□□□□□ -0.71
SMPD4-219ENST00000491128 CNN1P51911 297 aaKnown RBP10.61□□□□□ -0.71
SMPD4-219ENST00000491128 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.61□□□□□ -0.71
SMPD4-219ENST00000491128 C8orf86Q6ZUL3 223 aa10.61□□□□□ -0.71
SMPD4-219ENST00000491128 IGF2BP2-AS1Q96M15 143 aa10.61□□□□□ -0.71
SMPD4-219ENST00000491128 RHPN1-AS1Q9BWJ2 59 aa10.61□□□□□ -0.71
SMPD4-219ENST00000491128 PRAC2D3DTV9 90 aa10.61□□□□□ -0.71
SMPD4-219ENST00000491128 LGALS1P09382 135 aaKnown RBP10.61□□□□□ -0.71
SMPD4-219ENST00000491128 S100PP25815 95 aa10.61□□□□□ -0.71
SMPD4-219ENST00000491128 UBE2G1P62253 170 aa10.61□□□□□ -0.71
SMPD4-219ENST00000491128 PRNTQ86SH4 94 aa10.61□□□□□ -0.71
SMPD4-219ENST00000491128 BAGE2Q86Y30 109 aa10.61□□□□□ -0.71
SMPD4-219ENST00000491128 OR11H1Q8NG94 326 aa10.61□□□□□ -0.71
SMPD4-219ENST00000491128 UBE2E2Q96LR5 201 aa10.61□□□□□ -0.71
SMPD4-219ENST00000491128 ATG101Q9BSB4 218 aa10.61□□□□□ -0.71
SMPD4-219ENST00000491128 TENM1Q9UKZ4 2725 aa10.61□□□□□ -0.71
SMPD4-219ENST00000491128 CXCL1P09341 107 aa10.6□□□□□ -0.71
SMPD4-219ENST00000491128 ZNF705DP0CH99 300 aaPredicted RBP10.6□□□□□ -0.71
SMPD4-219ENST00000491128 ZNF705BP0CI00 300 aaPredicted RBP10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms