RNA–Protein interactions for RNA: ENST00000490808.1

HDAC3-210, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 605 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-210ENST00000490808 ATG101Q9BSB4 218 aa7.96□□□□□ -1.14
HDAC3-210ENST00000490808 ELOVL1Q9BW60 279 aa7.96□□□□□ -1.14
HDAC3-210ENST00000490808 Q9H3A6 140 aa7.96□□□□□ -1.14
HDAC3-210ENST00000490808 CLEC5AQ9NY25 188 aa7.96□□□□□ -1.14
HDAC3-210ENST00000490808 TRBV19A0A075B6N1 114 aa7.95□□□□□ -1.14
HDAC3-210ENST00000490808 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.95□□□□□ -1.14
HDAC3-210ENST00000490808 A0A1W2PS18 150 aa7.95□□□□□ -1.14
HDAC3-210ENST00000490808 COLCA2A8K830 154 aa7.95□□□□□ -1.14
HDAC3-210ENST00000490808 GGTLC3B5MD39 225 aa7.95□□□□□ -1.14
HDAC3-210ENST00000490808 IGLV1-40P01703 118 aa7.95□□□□□ -1.14
HDAC3-210ENST00000490808 ELANEP08246 267 aa7.95□□□□□ -1.14
HDAC3-210ENST00000490808 FOLR2P14207 255 aa7.95□□□□□ -1.14
HDAC3-210ENST00000490808 USF2Q15853 346 aaPredicted RBP7.95□□□□□ -1.14
HDAC3-210ENST00000490808 TEX38Q6PEX7 206 aa7.95□□□□□ -1.14
HDAC3-210ENST00000490808 TOMM20LQ6UXN7 152 aa7.95□□□□□ -1.14
HDAC3-210ENST00000490808 FAM24BQ8N5W8 94 aa7.95□□□□□ -1.14
HDAC3-210ENST00000490808 OR10G8Q8NGN5 311 aa7.95□□□□□ -1.14
HDAC3-210ENST00000490808 C2CD4CQ8TF44 421 aa7.95□□□□□ -1.14
HDAC3-210ENST00000490808 ISOC2Q96AB3 205 aa7.95□□□□□ -1.14
HDAC3-210ENST00000490808 SFRP2Q96HF1 295 aa7.95□□□□□ -1.14
HDAC3-210ENST00000490808 CCDC140Q96MF4 163 aa7.95□□□□□ -1.14
HDAC3-210ENST00000490808 LINC00527Q9UJ94 153 aa7.95□□□□□ -1.14
HDAC3-210ENST00000490808 SOX21Q9Y651 276 aaPredicted RBP7.95□□□□□ -1.14
HDAC3-210ENST00000490808 TRAV9-1A0A075B6T8 112 aa7.94□□□□□ -1.14
HDAC3-210ENST00000490808 FAM181BA6NEQ2 426 aa7.94□□□□□ -1.14
HDAC3-210ENST00000490808 GGCTO75223 188 aaKnown RBP7.94□□□□□ -1.14
HDAC3-210ENST00000490808 IGHG4P01861 327 aa7.94□□□□□ -1.14
HDAC3-210ENST00000490808 RAB5AP20339 215 aa7.94□□□□□ -1.14
HDAC3-210ENST00000490808 ADMP35318 185 aa7.94□□□□□ -1.14
HDAC3-210ENST00000490808 MYCNOSP40205 109 aa7.94□□□□□ -1.14
HDAC3-210ENST00000490808 TMEM183BQ1AE95 376 aa7.94□□□□□ -1.14
HDAC3-210ENST00000490808 FAM106AQ4KMX7 169 aa7.94□□□□□ -1.14
HDAC3-210ENST00000490808 LEMD1Q68G75 181 aa7.94□□□□□ -1.14
HDAC3-210ENST00000490808 OCC1Q8TAD7 63 aa7.94□□□□□ -1.14
HDAC3-210ENST00000490808 NOL4LQ96MY1 436 aaPredicted RBP7.94□□□□□ -1.14
HDAC3-210ENST00000490808 SLC50A1Q9BRV3 221 aa7.94□□□□□ -1.14
HDAC3-210ENST00000490808 C16orf95Q9H693 158 aa7.94□□□□□ -1.14
HDAC3-210ENST00000490808 ZNF586Q9NXT0 402 aa7.94□□□□□ -1.14
HDAC3-210ENST00000490808 ZNF785A8K8V0 405 aa7.93□□□□□ -1.14
HDAC3-210ENST00000490808 IGLC2P0DOY2 106 aa7.93□□□□□ -1.14
HDAC3-210ENST00000490808 ERVFC1-1P60608 527 aa7.93□□□□□ -1.14
HDAC3-210ENST00000490808 SRSF2Q01130 221 aaKnown RBP7.93□□□□□ -1.14
HDAC3-210ENST00000490808 FOXE3Q13461 319 aa7.93□□□□□ -1.14
HDAC3-210ENST00000490808 ELOBQ15370 118 aa7.93□□□□□ -1.14
HDAC3-210ENST00000490808 CENPWQ5EE01 88 aa7.93□□□□□ -1.14
HDAC3-210ENST00000490808 BAGE2Q86Y30 109 aa7.93□□□□□ -1.14
HDAC3-210ENST00000490808 OR4X2Q8NGF9 303 aa7.93□□□□□ -1.14
HDAC3-210ENST00000490808 ZNF414Q96IQ9 312 aa7.93□□□□□ -1.14
HDAC3-210ENST00000490808 DERL1Q9BUN8 251 aa7.93□□□□□ -1.14
HDAC3-210ENST00000490808 ZFAND3Q9H8U3 227 aa7.93□□□□□ -1.14
HDAC3-210ENST00000490808 OSTCQ9NRP0 149 aa7.93□□□□□ -1.14
HDAC3-210ENST00000490808 PEF1Q9UBV8 284 aaKnown RBP7.93□□□□□ -1.14
HDAC3-210ENST00000490808 TRBV24-1A0A075B6N3 115 aa7.92□□□□□ -1.14
HDAC3-210ENST00000490808 A0A087X0K7 114 aa7.92□□□□□ -1.14
HDAC3-210ENST00000490808 TRBV6-1A0A0K0K1D8 114 aa7.92□□□□□ -1.14
HDAC3-210ENST00000490808 CLPSL1A2RUU4 121 aa7.92□□□□□ -1.14
HDAC3-210ENST00000490808 ISLRO14498 428 aa7.92□□□□□ -1.14
HDAC3-210ENST00000490808 GCGP01275 180 aa7.92□□□□□ -1.14
HDAC3-210ENST00000490808 TCRAP04437 139 aa7.92□□□□□ -1.14
HDAC3-210ENST00000490808 MGST1P10620 155 aaKnown RBP7.92□□□□□ -1.14
HDAC3-210ENST00000490808 RPS10P46783 165 aaKnown RBP7.92□□□□□ -1.14
HDAC3-210ENST00000490808 FLI1Q01543 452 aaPredicted RBP7.92□□□□□ -1.14
HDAC3-210ENST00000490808 CFHR3Q02985 330 aa7.92□□□□□ -1.14
HDAC3-210ENST00000490808 COX19Q49B96 90 aa7.92□□□□□ -1.14
HDAC3-210ENST00000490808 Q8N2B8 174 aa7.92□□□□□ -1.14
HDAC3-210ENST00000490808 DAZAP1Q96EP5 407 aaKnown RBP7.92□□□□□ -1.14
HDAC3-210ENST00000490808 ZFP30Q9Y2G7 519 aa7.92□□□□□ -1.14
HDAC3-210ENST00000490808 KLF12Q9Y4X4 402 aa7.92□□□□□ -1.14
HDAC3-210ENST00000490808 URGCP-MRPS24S4R325 110 aa7.92□□□□□ -1.14
HDAC3-210ENST00000490808 WNK1Q9H4A3 2382 aa7.91□□□□□ -1.14
HDAC3-210ENST00000490808 PPP5D1E7EU14 171 aa7.91□□□□□ -1.14
HDAC3-210ENST00000490808 K7EMT4 169 aa7.91□□□□□ -1.14
HDAC3-210ENST00000490808 BUB3O43684 328 aa7.91□□□□□ -1.14
HDAC3-210ENST00000490808 PSMB8P28062 276 aa7.91□□□□□ -1.14
HDAC3-210ENST00000490808 RPEL1Q2QD12 228 aa7.91□□□□□ -1.14
HDAC3-210ENST00000490808 IBA57Q5T440 356 aaKnown RBP7.91□□□□□ -1.14
HDAC3-210ENST00000490808 SAMD13Q5VXD3 122 aa7.91□□□□□ -1.14
HDAC3-210ENST00000490808 FAM231DQ6ZW35 169 aa7.91□□□□□ -1.14
HDAC3-210ENST00000490808 C1QL4Q86Z23 238 aa7.91□□□□□ -1.14
HDAC3-210ENST00000490808 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.91□□□□□ -1.14
HDAC3-210ENST00000490808 TMEM75Q8N9X5 138 aa7.91□□□□□ -1.14
HDAC3-210ENST00000490808 FAM210BQ96KR6 192 aa7.91□□□□□ -1.14
HDAC3-210ENST00000490808 DUX5Q96PT3 197 aa7.91□□□□□ -1.14
HDAC3-210ENST00000490808 RPH3ALQ9UNE2 315 aa7.91□□□□□ -1.14
HDAC3-210ENST00000490808 UFC1Q9Y3C8 167 aa7.91□□□□□ -1.14
HDAC3-210ENST00000490808 TRBV20OR9-2A0A075B6H5 130 aa7.9□□□□□ -1.14
HDAC3-210ENST00000490808 MRPS12O15235 138 aaKnown RBP7.9□□□□□ -1.14
HDAC3-210ENST00000490808 S100A6P06703 90 aa7.9□□□□□ -1.14
HDAC3-210ENST00000490808 PFN1P07737 140 aaKnown RBP7.9□□□□□ -1.14
HDAC3-210ENST00000490808 C12orf54Q6X4T0 127 aa7.9□□□□□ -1.14
HDAC3-210ENST00000490808 SIGLEC15Q6ZMC9 328 aa7.9□□□□□ -1.14
HDAC3-210ENST00000490808 GPHB5Q86YW7 130 aa7.9□□□□□ -1.14
HDAC3-210ENST00000490808 IGF2BP2-AS1Q96M15 143 aa7.9□□□□□ -1.14
HDAC3-210ENST00000490808 ZNF702PQ9H963 129 aa7.9□□□□□ -1.14
HDAC3-210ENST00000490808 IL36BQ9NZH7 164 aa7.9□□□□□ -1.14
HDAC3-210ENST00000490808 IGHV3-35A0A0C4DH35 117 aa7.89□□□□□ -1.15
HDAC3-210ENST00000490808 ZNF705GA8MUZ8 300 aaPredicted RBP7.89□□□□□ -1.15
HDAC3-210ENST00000490808 GATCO43716 136 aaKnown RBP7.89□□□□□ -1.15
HDAC3-210ENST00000490808 LTAP01374 205 aa7.89□□□□□ -1.15
HDAC3-210ENST00000490808 FAM3BP58499 235 aaPredicted RBP7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms