RNA–Protein interactions for RNA: ENST00000490800.1

CLDN1-202, Transcript of claudin 1, humanhuman

TSL 2

Gene CLDN1, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1-202ENST00000490800 ARL3P36405 182 aa5.75□□□□□ -1.49
CLDN1-202ENST00000490800 ICAM4Q14773 271 aa5.75□□□□□ -1.49
CLDN1-202ENST00000490800 USF2Q15853 346 aaPredicted RBP5.75□□□□□ -1.49
CLDN1-202ENST00000490800 HAGHQ16775 308 aa5.75□□□□□ -1.49
CLDN1-202ENST00000490800 KHDC3LQ587J8 217 aa5.75□□□□□ -1.49
CLDN1-202ENST00000490800 ZNF506Q5JVG8 444 aa5.75□□□□□ -1.49
CLDN1-202ENST00000490800 C9orf66Q5T8R8 295 aa5.75□□□□□ -1.49
CLDN1-202ENST00000490800 TOMM20LQ6UXN7 152 aa5.75□□□□□ -1.49
CLDN1-202ENST00000490800 LINC00305Q7Z4B0 112 aa5.75□□□□□ -1.49
CLDN1-202ENST00000490800 KRTAP19-1Q8IUB9 90 aa5.75□□□□□ -1.49
CLDN1-202ENST00000490800 IQCF2Q8IXL9 164 aa5.75□□□□□ -1.49
CLDN1-202ENST00000490800 OR1N2Q8NGR9 330 aa5.75□□□□□ -1.49
CLDN1-202ENST00000490800 C4orf3Q8WVX3 66 aa5.75□□□□□ -1.49
CLDN1-202ENST00000490800 UBE2E2Q96LR5 201 aa5.75□□□□□ -1.49
CLDN1-202ENST00000490800 PRR25Q96S07 402 aa5.75□□□□□ -1.49
CLDN1-202ENST00000490800 RARRES2Q99969 163 aa5.75□□□□□ -1.49
CLDN1-202ENST00000490800 SHANK2-AS3Q9BTD1 123 aa5.75□□□□□ -1.49
CLDN1-202ENST00000490800 PBDC1Q9BVG4 233 aa5.75□□□□□ -1.49
CLDN1-202ENST00000490800 SLC25A39Q9BZJ4 359 aaPredicted RBP5.75□□□□□ -1.49
CLDN1-202ENST00000490800 GNG13Q9P2W3 67 aa5.75□□□□□ -1.49
CLDN1-202ENST00000490800 PUS1Q9Y606 427 aaKnown RBP eCLIP5.75□□□□□ -1.49
CLDN1-202ENST00000490800 H3BRN7 92 aa5.74□□□□□ -1.49
CLDN1-202ENST00000490800 BMPR1BO00238 502 aa5.74□□□□□ -1.49
CLDN1-202ENST00000490800 IFNA1P01562 189 aa5.74□□□□□ -1.49
CLDN1-202ENST00000490800 BCL2P10415 239 aa5.74□□□□□ -1.49
CLDN1-202ENST00000490800 PSMB3P49720 205 aa5.74□□□□□ -1.49
CLDN1-202ENST00000490800 TAS2R45P59539 299 aa5.74□□□□□ -1.49
CLDN1-202ENST00000490800 RELQ04864 619 aaPredicted RBP5.74□□□□□ -1.49
CLDN1-202ENST00000490800 FHL3Q13643 280 aa5.74□□□□□ -1.49
CLDN1-202ENST00000490800 PEA15Q15121 130 aa5.74□□□□□ -1.49
CLDN1-202ENST00000490800 PQLC2Q6ZP29 291 aa5.74□□□□□ -1.49
CLDN1-202ENST00000490800 SVIPQ8NHG7 77 aa5.74□□□□□ -1.49
CLDN1-202ENST00000490800 SUN5Q8TC36 379 aa5.74□□□□□ -1.49
CLDN1-202ENST00000490800 RXFP4Q8TDU9 374 aa5.74□□□□□ -1.49
CLDN1-202ENST00000490800 EIF5A2Q9GZV4 153 aaKnown RBP5.74□□□□□ -1.49
CLDN1-202ENST00000490800 TREM1Q9NP99 234 aa5.74□□□□□ -1.49
CLDN1-202ENST00000490800 PEF1Q9UBV8 284 aaKnown RBP5.74□□□□□ -1.49
CLDN1-202ENST00000490800 NBEAL2Q6ZNJ1 2754 aa5.73□□□□□ -1.49
CLDN1-202ENST00000490800 IGHV3OR16-8A0A075B7F1 116 aa5.73□□□□□ -1.49
CLDN1-202ENST00000490800 TMEM218A2RU14 115 aa5.73□□□□□ -1.49
CLDN1-202ENST00000490800 OR7C2O60412 319 aa5.73□□□□□ -1.49
CLDN1-202ENST00000490800 PAGE4O60829 102 aa5.73□□□□□ -1.49
CLDN1-202ENST00000490800 NHLRC4P0CG21 123 aaPredicted RBP5.73□□□□□ -1.49
CLDN1-202ENST00000490800 PYYP10082 97 aa5.73□□□□□ -1.49
CLDN1-202ENST00000490800 GP9P14770 177 aa5.73□□□□□ -1.49
CLDN1-202ENST00000490800 S100A1P23297 94 aa5.73□□□□□ -1.49
CLDN1-202ENST00000490800 PPT1P50897 306 aa5.73□□□□□ -1.49
CLDN1-202ENST00000490800 FAM209BQ5JX69 171 aa5.73□□□□□ -1.49
CLDN1-202ENST00000490800 LEMD1Q68G75 181 aa5.73□□□□□ -1.49
CLDN1-202ENST00000490800 FXYD5Q96DB9 178 aa5.73□□□□□ -1.49
CLDN1-202ENST00000490800 LINC00052Q96N35 136 aa5.73□□□□□ -1.49
CLDN1-202ENST00000490800 WWC2-AS2Q96NR7 200 aa5.73□□□□□ -1.49
CLDN1-202ENST00000490800 ASCL2Q99929 193 aa5.73□□□□□ -1.49
CLDN1-202ENST00000490800 PAXXQ9BUH6 204 aa5.73□□□□□ -1.49
CLDN1-202ENST00000490800 OR51M1Q9H341 326 aa5.73□□□□□ -1.49
CLDN1-202ENST00000490800 SMDT1Q9H4I9 107 aa5.73□□□□□ -1.49
CLDN1-202ENST00000490800 MANBALQ9NQG1 85 aa5.73□□□□□ -1.49
CLDN1-202ENST00000490800 TMEM167BQ9NRX6 74 aa5.73□□□□□ -1.49
CLDN1-202ENST00000490800 RABAC1Q9UI14 185 aa5.73□□□□□ -1.49
CLDN1-202ENST00000490800 VAX2Q9UIW0 290 aa5.73□□□□□ -1.49
CLDN1-202ENST00000490800 ZNF98A6NK75 572 aa5.72□□□□□ -1.49
CLDN1-202ENST00000490800 FAM74A7A6NL05 159 aa5.72□□□□□ -1.49
CLDN1-202ENST00000490800 NDUFA4O00483 81 aa5.72□□□□□ -1.49
CLDN1-202ENST00000490800 MRPS12O15235 138 aaKnown RBP5.72□□□□□ -1.49
CLDN1-202ENST00000490800 ZNF207O43670 478 aaKnown RBP5.72□□□□□ -1.49
CLDN1-202ENST00000490800 GGCTO75223 188 aaKnown RBP5.72□□□□□ -1.49
CLDN1-202ENST00000490800 HSPB1P04792 205 aaKnown RBP5.72□□□□□ -1.49
CLDN1-202ENST00000490800 SRP19P09132 144 aaKnown RBP5.72□□□□□ -1.49
CLDN1-202ENST00000490800 LGALS1P09382 135 aaKnown RBP5.72□□□□□ -1.49
CLDN1-202ENST00000490800 OR10J4P0C629 311 aa5.72□□□□□ -1.49
CLDN1-202ENST00000490800 ADCYAP1P18509 176 aa5.72□□□□□ -1.49
CLDN1-202ENST00000490800 ZP3P21754 424 aa5.72□□□□□ -1.49
CLDN1-202ENST00000490800 TAGLN2P37802 199 aaKnown RBP5.72□□□□□ -1.49
CLDN1-202ENST00000490800 CD81P60033 236 aa5.72□□□□□ -1.49
CLDN1-202ENST00000490800 UBE2G2P60604 165 aa5.72□□□□□ -1.49
CLDN1-202ENST00000490800 UBE2L3P68036 154 aaKnown RBP5.72□□□□□ -1.49
CLDN1-202ENST00000490800 UNQ9165/PRO28630Q6UXU0 137 aa5.72□□□□□ -1.49
CLDN1-202ENST00000490800 STXBP6Q8NFX7 210 aa5.72□□□□□ -1.49
CLDN1-202ENST00000490800 DLX4Q92988 240 aaPredicted RBP5.72□□□□□ -1.49
CLDN1-202ENST00000490800 NARS2Q96I59 477 aaKnown RBP5.72□□□□□ -1.49
CLDN1-202ENST00000490800 TMEM14CQ9P0S9 112 aa5.72□□□□□ -1.49
CLDN1-202ENST00000490800 ZNF256Q9Y2P7 627 aaPredicted RBP5.72□□□□□ -1.49
CLDN1-202ENST00000490800 YTHDF2Q9Y5A9 579 aaKnown RBP5.72□□□□□ -1.49
CLDN1-202ENST00000490800 TENM3Q9P273 2699 aa5.71□□□□□ -1.5
CLDN1-202ENST00000490800 IGHV4OR15-8A0A075B7B6 117 aa5.71□□□□□ -1.5
CLDN1-202ENST00000490800 A0A087WW49 117 aa5.71□□□□□ -1.5
CLDN1-202ENST00000490800 ZNF785A8K8V0 405 aa5.71□□□□□ -1.5
CLDN1-202ENST00000490800 KRBOX1C9JBD0 128 aa5.71□□□□□ -1.5
CLDN1-202ENST00000490800 C11orf94C9JXX5 98 aa5.71□□□□□ -1.5
CLDN1-202ENST00000490800 LINC01619G3V211 115 aa5.71□□□□□ -1.5
CLDN1-202ENST00000490800 H3BQ15 152 aa5.71□□□□□ -1.5
CLDN1-202ENST00000490800 OVOL1O14753 267 aa5.71□□□□□ -1.5
CLDN1-202ENST00000490800 NDUFS6O75380 124 aaKnown RBP5.71□□□□□ -1.5
CLDN1-202ENST00000490800 APOHP02749 345 aaPredicted RBP5.71□□□□□ -1.5
CLDN1-202ENST00000490800 SFTA3P0C7M3 94 aa5.71□□□□□ -1.5
CLDN1-202ENST00000490800 CRYBB3P26998 211 aa5.71□□□□□ -1.5
CLDN1-202ENST00000490800 ATP5G3P48201 142 aa5.71□□□□□ -1.5
CLDN1-202ENST00000490800 INSL3P51460 131 aa5.71□□□□□ -1.5
CLDN1-202ENST00000490800 MEF2BQ02080 365 aaPredicted RBP5.71□□□□□ -1.5
CLDN1-202ENST00000490800 C10orf91Q5T1B1 145 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms