RNA–Protein interactions for RNA: ENST00000490387.1

RAPGEF3-212, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 5

Gene RAPGEF3, Length 699 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-212ENST00000490387 MEOX2P50222 304 aa12.67□□□□□ -0.38
RAPGEF3-212ENST00000490387 ZNF726P1Q15940 193 aa12.67□□□□□ -0.38
RAPGEF3-212ENST00000490387 AKR1C8PQ5T2L2 129 aa12.67□□□□□ -0.38
RAPGEF3-212ENST00000490387 SSX7Q7RTT5 188 aa12.67□□□□□ -0.38
RAPGEF3-212ENST00000490387 RCHY1Q96PM5 261 aa12.67□□□□□ -0.38
RAPGEF3-212ENST00000490387 ZMAT4Q9H898 229 aa12.67□□□□□ -0.38
RAPGEF3-212ENST00000490387 MAP6D1Q9H9H5 199 aa12.67□□□□□ -0.38
RAPGEF3-212ENST00000490387 TRAV8-2A0A0B4J237 113 aa12.66□□□□□ -0.38
RAPGEF3-212ENST00000490387 A0A1W2PPV4 95 aa12.66□□□□□ -0.38
RAPGEF3-212ENST00000490387 UMAD1C9J7I0 102 aa12.66□□□□□ -0.38
RAPGEF3-212ENST00000490387 IGHV4-30-4P0DP06 118 aa12.66□□□□□ -0.38
RAPGEF3-212ENST00000490387 PSMB3P49720 205 aa12.66□□□□□ -0.38
RAPGEF3-212ENST00000490387 TAS2R45P59539 299 aa12.66□□□□□ -0.38
RAPGEF3-212ENST00000490387 KHDC3LQ587J8 217 aa12.66□□□□□ -0.38
RAPGEF3-212ENST00000490387 SAMD13Q5VXD3 122 aa12.66□□□□□ -0.38
RAPGEF3-212ENST00000490387 RAB24Q969Q5 203 aa12.66□□□□□ -0.38
RAPGEF3-212ENST00000490387 FXYD5Q96DB9 178 aa12.66□□□□□ -0.38
RAPGEF3-212ENST00000490387 SAT2Q96F10 170 aaPredicted RBP12.66□□□□□ -0.38
RAPGEF3-212ENST00000490387 ZNF586Q9NXT0 402 aa12.66□□□□□ -0.38
RAPGEF3-212ENST00000490387 STAB2Q8WWQ8 2551 aa12.66□□□□□ -0.38
RAPGEF3-212ENST00000490387 SLC17A3O00476 420 aa12.65□□□□□ -0.38
RAPGEF3-212ENST00000490387 ISLRO14498 428 aa12.65□□□□□ -0.38
RAPGEF3-212ENST00000490387 STAG3L2P0CL84 134 aa12.65□□□□□ -0.38
RAPGEF3-212ENST00000490387 STAG3L3P0CL85 134 aa12.65□□□□□ -0.38
RAPGEF3-212ENST00000490387 HIST1H1EP10412 219 aaKnown RBP12.65□□□□□ -0.38
RAPGEF3-212ENST00000490387 LCN15Q6UWW0 184 aa12.65□□□□□ -0.38
RAPGEF3-212ENST00000490387 PQLC2Q6ZP29 291 aa12.65□□□□□ -0.38
RAPGEF3-212ENST00000490387 PAXXQ9BUH6 204 aa12.65□□□□□ -0.38
RAPGEF3-212ENST00000490387 ACTR3CQ9C0K3 210 aaPredicted RBP12.65□□□□□ -0.38
RAPGEF3-212ENST00000490387 WFDC10AQ9H1F0 79 aa12.65□□□□□ -0.38
RAPGEF3-212ENST00000490387 OR51M1Q9H341 326 aa12.65□□□□□ -0.38
RAPGEF3-212ENST00000490387 UBQLN2Q9UHD9 624 aa12.65□□□□□ -0.38
RAPGEF3-212ENST00000490387 TRBV19A0A075B6N1 114 aa12.64□□□□□ -0.39
RAPGEF3-212ENST00000490387 CTXND1A0A1B0GTU2 59 aa12.64□□□□□ -0.39
RAPGEF3-212ENST00000490387 ZNF253O75346 499 aa12.64□□□□□ -0.39
RAPGEF3-212ENST00000490387 NDUFB4O95168 129 aa12.64□□□□□ -0.39
RAPGEF3-212ENST00000490387 SNRPCP09234 159 aaKnown RBP12.64□□□□□ -0.39
RAPGEF3-212ENST00000490387 ZNF688P0C7X2 276 aa12.64□□□□□ -0.39
RAPGEF3-212ENST00000490387 FHITP49789 147 aa12.64□□□□□ -0.39
RAPGEF3-212ENST00000490387 GUK1Q16774 197 aa12.64□□□□□ -0.39
RAPGEF3-212ENST00000490387 EIF5AL1Q6IS14 154 aaKnown RBP12.64□□□□□ -0.39
RAPGEF3-212ENST00000490387 ZNF331Q9NQX6 463 aaPredicted RBP12.64□□□□□ -0.39
RAPGEF3-212ENST00000490387 A8MZ25 164 aa12.63□□□□□ -0.39
RAPGEF3-212ENST00000490387 OR11H12B2RN74 326 aa12.63□□□□□ -0.39
RAPGEF3-212ENST00000490387 H3BTX0 84 aa12.63□□□□□ -0.39
RAPGEF3-212ENST00000490387 HMGB3O15347 200 aaKnown RBP12.63□□□□□ -0.39
RAPGEF3-212ENST00000490387 OR7C2O60412 319 aa12.63□□□□□ -0.39
RAPGEF3-212ENST00000490387 OR10J4P0C629 311 aa12.63□□□□□ -0.39
RAPGEF3-212ENST00000490387 ARL14EPLP0DKL9 152 aa12.63□□□□□ -0.39
RAPGEF3-212ENST00000490387 CMC4P56277 68 aaPredicted RBP12.63□□□□□ -0.39
RAPGEF3-212ENST00000490387 SNRPD3P62318 126 aaKnown RBP12.63□□□□□ -0.39
RAPGEF3-212ENST00000490387 PDE6HQ13956 83 aa12.63□□□□□ -0.39
RAPGEF3-212ENST00000490387 RNF141Q8WVD5 230 aa12.63□□□□□ -0.39
RAPGEF3-212ENST00000490387 C16orf92Q96LL3 132 aa12.63□□□□□ -0.39
RAPGEF3-212ENST00000490387 C20orf173Q96LM9 149 aa12.63□□□□□ -0.39
RAPGEF3-212ENST00000490387 CITED4Q96RK1 184 aa12.63□□□□□ -0.39
RAPGEF3-212ENST00000490387 SLC50A1Q9BRV3 221 aa12.63□□□□□ -0.39
RAPGEF3-212ENST00000490387 HUWE1Q7Z6Z7 4374 aaKnown RBP12.62□□□□□ -0.39
RAPGEF3-212ENST00000490387 AGRNO00468 2067 aa12.62□□□□□ -0.39
RAPGEF3-212ENST00000490387 C3orf84H3BNL1 204 aa12.62□□□□□ -0.39
RAPGEF3-212ENST00000490387 NBEAP1P0C6P0 100 aa12.62□□□□□ -0.39
RAPGEF3-212ENST00000490387 ID1P41134 155 aa12.62□□□□□ -0.39
RAPGEF3-212ENST00000490387 DEFB131AP59861 70 aa12.62□□□□□ -0.39
RAPGEF3-212ENST00000490387 UBE2L3P68036 154 aaKnown RBP12.62□□□□□ -0.39
RAPGEF3-212ENST00000490387 PSMG4Q5JS54 123 aa12.62□□□□□ -0.39
RAPGEF3-212ENST00000490387 DPPA3Q6W0C5 159 aa12.62□□□□□ -0.39
RAPGEF3-212ENST00000490387 DEFB125Q8N687 156 aa12.62□□□□□ -0.39
RAPGEF3-212ENST00000490387 SUN5Q8TC36 379 aa12.62□□□□□ -0.39
RAPGEF3-212ENST00000490387 PHYHIPLQ96FC7 376 aa12.62□□□□□ -0.39
RAPGEF3-212ENST00000490387 NBEAL2Q6ZNJ1 2754 aa12.61□□□□□ -0.39
RAPGEF3-212ENST00000490387 KMT2CQ8NEZ4 4911 aaKnown RBP12.61□□□□□ -0.39
RAPGEF3-212ENST00000490387 SULT1A2P50226 295 aa12.61□□□□□ -0.39
RAPGEF3-212ENST00000490387 ZNF124Q15973 351 aa12.61□□□□□ -0.39
RAPGEF3-212ENST00000490387 IGFL4Q6B9Z1 124 aa12.61□□□□□ -0.39
RAPGEF3-212ENST00000490387 APRG1Q8IVJ8 170 aa12.61□□□□□ -0.39
RAPGEF3-212ENST00000490387 CXorf1O96002 111 aa12.6□□□□□ -0.39
RAPGEF3-212ENST00000490387 HLA-DMBP28068 263 aa12.6□□□□□ -0.39
RAPGEF3-212ENST00000490387 GCHFRP30047 84 aa12.6□□□□□ -0.39
RAPGEF3-212ENST00000490387 RAB5CP51148 216 aa12.6□□□□□ -0.39
RAPGEF3-212ENST00000490387 RNF182Q8N6D2 247 aa12.6□□□□□ -0.39
RAPGEF3-212ENST00000490387 FAM213BQ8TBF2 198 aa12.6□□□□□ -0.39
RAPGEF3-212ENST00000490387 BLNKQ8WV28 456 aa12.6□□□□□ -0.39
RAPGEF3-212ENST00000490387 MBD3L1Q8WWY6 194 aa12.6□□□□□ -0.39
RAPGEF3-212ENST00000490387 TM2D3Q9BRN9 247 aa12.6□□□□□ -0.39
RAPGEF3-212ENST00000490387 TUBA4BQ9H853 241 aa12.6□□□□□ -0.39
RAPGEF3-212ENST00000490387 MAP1LC3B2A6NCE7 125 aa12.59□□□□□ -0.39
RAPGEF3-212ENST00000490387 LINC00322Q6ZN03 302 aaPredicted RBP12.59□□□□□ -0.39
RAPGEF3-212ENST00000490387 MUC7Q8TAX7 377 aa12.59□□□□□ -0.39
RAPGEF3-212ENST00000490387 LINC00052Q96N35 136 aa12.59□□□□□ -0.39
RAPGEF3-212ENST00000490387 MAP1LC3BQ9GZQ8 125 aa12.59□□□□□ -0.39
RAPGEF3-212ENST00000490387 SRD5A3Q9H8P0 318 aa12.59□□□□□ -0.39
RAPGEF3-212ENST00000490387 DEFB1P60022 68 aa12.58□□□□□ -0.4
RAPGEF3-212ENST00000490387 PSG3Q16557 428 aa12.58□□□□□ -0.4
RAPGEF3-212ENST00000490387 FAM74A1Q5RGS3 127 aa12.58□□□□□ -0.4
RAPGEF3-212ENST00000490387 ALKAL2Q6UX46 152 aa12.58□□□□□ -0.4
RAPGEF3-212ENST00000490387 LRRC20Q8TCA0 184 aa12.58□□□□□ -0.4
RAPGEF3-212ENST00000490387 CLEC5AQ9NY25 188 aa12.58□□□□□ -0.4
RAPGEF3-212ENST00000490387 RBMY1BA6NDE4 496 aaKnown RBP12.57□□□□□ -0.4
RAPGEF3-212ENST00000490387 RBMY1EA6NEQ0 496 aaKnown RBP12.57□□□□□ -0.4
RAPGEF3-212ENST00000490387 RBMY1DP0C7P1 496 aaKnown RBP12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms