RNA–Protein interactions for RNA: ENST00000490077.5

TNXB-206, Transcript of tenascin XB, humanhuman

TSL 1 (best)

Gene TNXB, Length 2,756 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-206ENST00000490077 TRAV9-1A0A075B6T8 112 aa10.43□□□□□ -0.74
TNXB-206ENST00000490077 K7ENP7 123 aa10.43□□□□□ -0.74
TNXB-206ENST00000490077 PPIFP30405 207 aaKnown RBP10.43□□□□□ -0.74
TNXB-206ENST00000490077 SUB1P53999 127 aaKnown RBP eCLIP10.43□□□□□ -0.74
TNXB-206ENST00000490077 Q86TA4 180 aa10.43□□□□□ -0.74
TNXB-206ENST00000490077 C8orf46Q8TAG6 207 aa10.43□□□□□ -0.74
TNXB-206ENST00000490077 BORCS7Q96B45 105 aa10.43□□□□□ -0.74
TNXB-206ENST00000490077 KLF12Q9Y4X4 402 aa10.43□□□□□ -0.74
TNXB-206ENST00000490077 F8W735 103 aaPredicted RBP10.42□□□□□ -0.74
TNXB-206ENST00000490077 ZFP36P26651 326 aaKnown RBP10.42□□□□□ -0.74
TNXB-206ENST00000490077 APOBEC3AP31941 199 aaPredicted RBP10.42□□□□□ -0.74
TNXB-206ENST00000490077 TRGV9Q99603 122 aa10.42□□□□□ -0.74
TNXB-206ENST00000490077 ACACBO00763 2458 aa10.42□□□□□ -0.74
TNXB-206ENST00000490077 TRBV9A0A0B4J1U6 114 aa10.42□□□□□ -0.74
TNXB-206ENST00000490077 APOHP02749 345 aaPredicted RBP10.42□□□□□ -0.74
TNXB-206ENST00000490077 MT-ND6P03923 174 aa10.42□□□□□ -0.74
TNXB-206ENST00000490077 TSPOP30536 169 aa10.42□□□□□ -0.74
TNXB-206ENST00000490077 ZNF491Q8N8L2 437 aa10.42□□□□□ -0.74
TNXB-206ENST00000490077 C19orf24Q9BVV8 132 aa10.42□□□□□ -0.74
TNXB-206ENST00000490077 MSRB1Q9NZV6 116 aa10.42□□□□□ -0.74
TNXB-206ENST00000490077 LINC00527Q9UJ94 153 aa10.42□□□□□ -0.74
TNXB-206ENST00000490077 SOX21Q9Y651 276 aaPredicted RBP10.42□□□□□ -0.74
TNXB-206ENST00000490077 IGHV3OR16-10A0A075B7F0 116 aa10.41□□□□□ -0.74
TNXB-206ENST00000490077 OR2T8A6NH00 312 aa10.41□□□□□ -0.74
TNXB-206ENST00000490077 NCBP2LA6PVI3 153 aaKnown RBP10.41□□□□□ -0.74
TNXB-206ENST00000490077 FAM71F2Q6NXP2 309 aa10.41□□□□□ -0.74
TNXB-206ENST00000490077 FAM231DQ6ZW35 169 aa10.41□□□□□ -0.74
TNXB-206ENST00000490077 RASL11BQ9BPW5 248 aa10.41□□□□□ -0.74
TNXB-206ENST00000490077 LAMTOR2Q9Y2Q5 125 aa10.41□□□□□ -0.74
TNXB-206ENST00000490077 MSRB2Q9Y3D2 182 aa10.41□□□□□ -0.74
TNXB-206ENST00000490077 GOLT1BQ9Y3E0 138 aa10.41□□□□□ -0.74
TNXB-206ENST00000490077 LY6LH3BQJ8 138 aa10.41□□□□□ -0.74
TNXB-206ENST00000490077 TOMM40O96008 361 aa10.41□□□□□ -0.74
TNXB-206ENST00000490077 CD3EP07766 207 aa10.41□□□□□ -0.74
TNXB-206ENST00000490077 LGALS7P47929 136 aa10.41□□□□□ -0.74
TNXB-206ENST00000490077 ZNF80P51504 273 aaPredicted RBP10.41□□□□□ -0.74
TNXB-206ENST00000490077 HNRNPA3P51991 378 aaKnown RBP10.41□□□□□ -0.74
TNXB-206ENST00000490077 HBBP68871 147 aa10.41□□□□□ -0.74
TNXB-206ENST00000490077 OR4F17Q8NGA8 305 aa10.41□□□□□ -0.74
TNXB-206ENST00000490077 OR8B3Q8NGG8 313 aa10.41□□□□□ -0.74
TNXB-206ENST00000490077 RBM14Q96PK6 669 aaKnown RBP10.41□□□□□ -0.74
TNXB-206ENST00000490077 CHRDL1Q9BU40 450 aa10.41□□□□□ -0.74
TNXB-206ENST00000490077 CHODLQ9H9P2 273 aa10.41□□□□□ -0.74
TNXB-206ENST00000490077 C1RLQ9NZP8 487 aa10.41□□□□□ -0.74
TNXB-206ENST00000490077 KAAG1Q9UBP8 84 aa10.41□□□□□ -0.74
TNXB-206ENST00000490077 NOTCH3Q9UM47 2321 aa10.41□□□□□ -0.74
TNXB-206ENST00000490077 MYO9AB2RTY4 2548 aa10.41□□□□□ -0.74
TNXB-206ENST00000490077 INS-IGF2F8WCM5 200 aa10.4□□□□□ -0.74
TNXB-206ENST00000490077 CCL25O15444 150 aa10.4□□□□□ -0.74
TNXB-206ENST00000490077 ZNF207O43670 478 aaKnown RBP10.4□□□□□ -0.74
TNXB-206ENST00000490077 HIST1H1EP10412 219 aaKnown RBP10.4□□□□□ -0.74
TNXB-206ENST00000490077 MC5RP33032 325 aa10.4□□□□□ -0.74
TNXB-206ENST00000490077 DEFB1P60022 68 aa10.4□□□□□ -0.74
TNXB-206ENST00000490077 ZNF575Q86XF7 245 aa10.4□□□□□ -0.74
TNXB-206ENST00000490077 C5orf17Q8NAS9 161 aa10.4□□□□□ -0.74
TNXB-206ENST00000490077 FANCD2OSQ96PS1 177 aa10.4□□□□□ -0.74
TNXB-206ENST00000490077 OR2J3O76001 311 aa10.4□□□□□ -0.74
TNXB-206ENST00000490077 SIGLEC15Q6ZMC9 328 aa10.4□□□□□ -0.74
TNXB-206ENST00000490077 LBHQ53QV2 105 aaPredicted RBP10.39□□□□□ -0.75
TNXB-206ENST00000490077 PIP4P2Q8N4L2 257 aa10.39□□□□□ -0.75
TNXB-206ENST00000490077 VGLL1Q99990 258 aa10.39□□□□□ -0.75
TNXB-206ENST00000490077 MRPL27Q9P0M9 148 aaKnown RBP10.39□□□□□ -0.75
TNXB-206ENST00000490077 RAXQ9Y2V3 346 aa10.39□□□□□ -0.75
TNXB-206ENST00000490077 PRAC2D3DTV9 90 aa10.39□□□□□ -0.75
TNXB-206ENST00000490077 MPV17L2Q567V2 206 aa10.39□□□□□ -0.75
TNXB-206ENST00000490077 RNF182Q8N6D2 247 aa10.39□□□□□ -0.75
TNXB-206ENST00000490077 OR4B1Q8NGF8 309 aa10.39□□□□□ -0.75
TNXB-206ENST00000490077 TRBV19A0A075B6N1 114 aa10.38□□□□□ -0.75
TNXB-206ENST00000490077 SERTM2A0A1B0GWG4 89 aa10.38□□□□□ -0.75
TNXB-206ENST00000490077 OR4C46A6NHA9 309 aa10.38□□□□□ -0.75
TNXB-206ENST00000490077 ERCC8Q13216 396 aa10.38□□□□□ -0.75
TNXB-206ENST00000490077 WIPF2Q8TF74 440 aaPredicted RBP10.38□□□□□ -0.75
TNXB-206ENST00000490077 CFHR4Q92496 578 aa10.38□□□□□ -0.75
TNXB-206ENST00000490077 NAA38Q9BRA0 125 aaKnown RBP10.38□□□□□ -0.75
TNXB-206ENST00000490077 OR4A5Q8NH83 315 aa10.38□□□□□ -0.75
TNXB-206ENST00000490077 DEFB104AQ8WTQ1 72 aa10.38□□□□□ -0.75
TNXB-206ENST00000490077 DAZAP1Q96EP5 407 aaKnown RBP10.38□□□□□ -0.75
TNXB-206ENST00000490077 NGBQ9NPG2 151 aa10.38□□□□□ -0.75
TNXB-206ENST00000490077 PTPN13Q12923 2485 aa10.38□□□□□ -0.75
TNXB-206ENST00000490077 TEX15Q9BXT5 2789 aa10.38□□□□□ -0.75
TNXB-206ENST00000490077 A0A087X0K7 114 aa10.37□□□□□ -0.75
TNXB-206ENST00000490077 LOC102724200A0A096LPH7 203 aaPredicted RBP10.37□□□□□ -0.75
TNXB-206ENST00000490077 MRPS12O15235 138 aaKnown RBP10.37□□□□□ -0.75
TNXB-206ENST00000490077 BTF3P20290 206 aaKnown RBP10.37□□□□□ -0.75
TNXB-206ENST00000490077 IFI27P40305 119 aaPredicted RBP10.37□□□□□ -0.75
TNXB-206ENST00000490077 ADORA2A-AS1P86434 159 aa10.37□□□□□ -0.75
TNXB-206ENST00000490077 PVRIGQ6DKI7 326 aa10.37□□□□□ -0.75
TNXB-206ENST00000490077 AMN1Q8IY45 258 aa10.37□□□□□ -0.75
TNXB-206ENST00000490077 NPIPB5A8MRT5 1133 aa10.37□□□□□ -0.75
TNXB-206ENST00000490077 IGHG4P01861 327 aa10.37□□□□□ -0.75
TNXB-206ENST00000490077 GATA1P15976 413 aaPredicted RBP10.37□□□□□ -0.75
TNXB-206ENST00000490077 RNF125Q96EQ8 232 aa10.37□□□□□ -0.75
TNXB-206ENST00000490077 ZNF414Q96IQ9 312 aa10.37□□□□□ -0.75
TNXB-206ENST00000490077 SONP18583 2426 aaKnown RBP10.37□□□□□ -0.75
TNXB-206ENST00000490077 HLA-DRB1P01911 266 aa10.37□□□□□ -0.75
TNXB-206ENST00000490077 UQCR10Q9UDW1 63 aa10.37□□□□□ -0.75
TNXB-206ENST00000490077 PSG8Q9UQ74 426 aa10.37□□□□□ -0.75
TNXB-206ENST00000490077 SMAD5-AS1Q9Y6J3 95 aa10.37□□□□□ -0.75
TNXB-206ENST00000490077 A8MWL6 223 aa10.36□□□□□ -0.75
TNXB-206ENST00000490077 B9A039 149 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms