RNA–Protein interactions for RNA: ENST00000489357.5

VTI1A-207, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 3

Gene VTI1A, Length 444 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-207ENST00000489357 GFRA4Q9GZZ7 299 aa6.64□□□□□ -1.35
VTI1A-207ENST00000489357 C21orf62Q9NYP8 219 aa6.64□□□□□ -1.35
VTI1A-207ENST00000489357 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.64□□□□□ -1.35
VTI1A-207ENST00000489357 NIPBLQ6KC79 2804 aaeCLIP6.64□□□□□ -1.35
VTI1A-207ENST00000489357 TRBV19A0A075B6N1 114 aa6.63□□□□□ -1.35
VTI1A-207ENST00000489357 IGHV4-61A0A0C4DH41 118 aa6.63□□□□□ -1.35
VTI1A-207ENST00000489357 A0A1W2PRD5 423 aa6.63□□□□□ -1.35
VTI1A-207ENST00000489357 A0A1W2PRF3 423 aa6.63□□□□□ -1.35
VTI1A-207ENST00000489357 A0A1W2PRM7 423 aa6.63□□□□□ -1.35
VTI1A-207ENST00000489357 IZUMO1RA6ND01 250 aa6.63□□□□□ -1.35
VTI1A-207ENST00000489357 PGPA6NDG6 321 aa6.63□□□□□ -1.35
VTI1A-207ENST00000489357 NCBP2LA6PVI3 153 aaKnown RBP6.63□□□□□ -1.35
VTI1A-207ENST00000489357 LY6G6DO95868 133 aa6.63□□□□□ -1.35
VTI1A-207ENST00000489357 IGLC2P0DOY2 106 aa6.63□□□□□ -1.35
VTI1A-207ENST00000489357 SAA4P35542 130 aa6.63□□□□□ -1.35
VTI1A-207ENST00000489357 LYZP61626 148 aa6.63□□□□□ -1.35
VTI1A-207ENST00000489357 RANP62826 216 aaKnown RBP6.63□□□□□ -1.35
VTI1A-207ENST00000489357 Q0VG73 95 aa6.63□□□□□ -1.35
VTI1A-207ENST00000489357 ASPHD1Q5U4P2 390 aa6.63□□□□□ -1.35
VTI1A-207ENST00000489357 CYB5R2Q6BCY4 276 aa6.63□□□□□ -1.35
VTI1A-207ENST00000489357 TMEM75Q8N9X5 138 aa6.63□□□□□ -1.35
VTI1A-207ENST00000489357 MAPK1IP1LQ8NDC0 245 aa6.63□□□□□ -1.35
VTI1A-207ENST00000489357 OR4B1Q8NGF8 309 aa6.63□□□□□ -1.35
VTI1A-207ENST00000489357 CMTM2Q8TAZ6 248 aa6.63□□□□□ -1.35
VTI1A-207ENST00000489357 TSKUQ8WUA8 353 aa6.63□□□□□ -1.35
VTI1A-207ENST00000489357 GRAMD2BQ96HH9 432 aa6.63□□□□□ -1.35
VTI1A-207ENST00000489357 GPR61Q9BZJ8 451 aa6.63□□□□□ -1.35
VTI1A-207ENST00000489357 Q9H3A6 140 aa6.63□□□□□ -1.35
VTI1A-207ENST00000489357 NIT2Q9NQR4 276 aa6.63□□□□□ -1.35
VTI1A-207ENST00000489357 AURKAIP1Q9NWT8 199 aaPredicted RBP6.63□□□□□ -1.35
VTI1A-207ENST00000489357 TMEM160Q9NX00 188 aa6.63□□□□□ -1.35
VTI1A-207ENST00000489357 NAT8BQ9UHF3 227 aa6.63□□□□□ -1.35
VTI1A-207ENST00000489357 ZFP30Q9Y2G7 519 aa6.63□□□□□ -1.35
VTI1A-207ENST00000489357 IGHV7-81A0A0B4J1V7 117 aa6.62□□□□□ -1.35
VTI1A-207ENST00000489357 ZNF705GA8MUZ8 300 aaPredicted RBP6.62□□□□□ -1.35
VTI1A-207ENST00000489357 A8MWL6 223 aa6.62□□□□□ -1.35
VTI1A-207ENST00000489357 GATCO43716 136 aaKnown RBP6.62□□□□□ -1.35
VTI1A-207ENST00000489357 IGHV3-48P01763 117 aa6.62□□□□□ -1.35
VTI1A-207ENST00000489357 AMY1AP04745 511 aa6.62□□□□□ -1.35
VTI1A-207ENST00000489357 MGST1P10620 155 aaKnown RBP6.62□□□□□ -1.35
VTI1A-207ENST00000489357 RPL7P18124 248 aaKnown RBP6.62□□□□□ -1.35
VTI1A-207ENST00000489357 PAFAH1B2P68402 229 aa6.62□□□□□ -1.35
VTI1A-207ENST00000489357 PSG9Q00887 426 aa6.62□□□□□ -1.35
VTI1A-207ENST00000489357 JOSD1Q15040 202 aaPredicted RBP6.62□□□□□ -1.35
VTI1A-207ENST00000489357 USF2Q15853 346 aaPredicted RBP6.62□□□□□ -1.35
VTI1A-207ENST00000489357 OR10J3Q5JRS4 329 aa6.62□□□□□ -1.35
VTI1A-207ENST00000489357 OR10D4PQ8NGN7 298 aa6.62□□□□□ -1.35
VTI1A-207ENST00000489357 AJUBAQ96IF1 538 aa6.62□□□□□ -1.35
VTI1A-207ENST00000489357 PRSS22Q9GZN4 317 aa6.62□□□□□ -1.35
VTI1A-207ENST00000489357 MEGF9Q9H1U4 602 aa6.62□□□□□ -1.35
VTI1A-207ENST00000489357 ZFHX3Q15911 3703 aa6.62□□□□□ -1.35
VTI1A-207ENST00000489357 TRBV7-1A0A0A6YYK4 115 aa6.61□□□□□ -1.35
VTI1A-207ENST00000489357 IGHV1-69DA0A0B4J2H0 117 aa6.61□□□□□ -1.35
VTI1A-207ENST00000489357 CENPVL3A0A0U1RRI6 287 aa6.61□□□□□ -1.35
VTI1A-207ENST00000489357 NPIPB6E9PJ23 425 aa6.61□□□□□ -1.35
VTI1A-207ENST00000489357 H3BUA1 57 aa6.61□□□□□ -1.35
VTI1A-207ENST00000489357 M0QZK8 103 aa6.61□□□□□ -1.35
VTI1A-207ENST00000489357 BMPR1BO00238 502 aa6.61□□□□□ -1.35
VTI1A-207ENST00000489357 SLC17A3O00476 420 aa6.61□□□□□ -1.35
VTI1A-207ENST00000489357 PAX4O43316 350 aa6.61□□□□□ -1.35
VTI1A-207ENST00000489357 IGHV1-69P01742 117 aa6.61□□□□□ -1.35
VTI1A-207ENST00000489357 AMBPP02760 352 aa6.61□□□□□ -1.35
VTI1A-207ENST00000489357 IL4P05112 153 aa6.61□□□□□ -1.35
VTI1A-207ENST00000489357 IGHV4-31P0DP07 118 aa6.61□□□□□ -1.35
VTI1A-207ENST00000489357 FABP4P15090 132 aa6.61□□□□□ -1.35
VTI1A-207ENST00000489357 CRISP2P16562 243 aa6.61□□□□□ -1.35
VTI1A-207ENST00000489357 PYY3Q5JQD4 70 aa6.61□□□□□ -1.35
VTI1A-207ENST00000489357 Q6AWC8 147 aa6.61□□□□□ -1.35
VTI1A-207ENST00000489357 OR8I2Q8N0Y5 310 aa6.61□□□□□ -1.35
VTI1A-207ENST00000489357 DYNAPQ8N1N2 210 aa6.61□□□□□ -1.35
VTI1A-207ENST00000489357 GBGT1Q8N5D6 347 aa6.61□□□□□ -1.35
VTI1A-207ENST00000489357 BLNKQ8WV28 456 aa6.61□□□□□ -1.35
VTI1A-207ENST00000489357 RNASE7Q9H1E1 156 aaKnown RBP6.61□□□□□ -1.35
VTI1A-207ENST00000489357 AAMDCQ9H7C9 122 aa6.61□□□□□ -1.35
VTI1A-207ENST00000489357 ZNF586Q9NXT0 402 aa6.61□□□□□ -1.35
VTI1A-207ENST00000489357 ZNF580Q9UK33 172 aa6.61□□□□□ -1.35
VTI1A-207ENST00000489357 MOB4Q9Y3A3 225 aa6.61□□□□□ -1.35
VTI1A-207ENST00000489357 MXRA5Q9NR99 2828 aa6.61□□□□□ -1.35
VTI1A-207ENST00000489357 A0A1B0GW15 77 aa6.6□□□□□ -1.35
VTI1A-207ENST00000489357 C19orf71A6NCJ1 209 aa6.6□□□□□ -1.35
VTI1A-207ENST00000489357 FAM223BA6NKX1 122 aa6.6□□□□□ -1.35
VTI1A-207ENST00000489357 SNURFLB1AK76 121 aa6.6□□□□□ -1.35
VTI1A-207ENST00000489357 MRPS12O15235 138 aaKnown RBP6.6□□□□□ -1.35
VTI1A-207ENST00000489357 CD5LO43866 347 aa6.6□□□□□ -1.35
VTI1A-207ENST00000489357 APELAP0DMC3 54 aa6.6□□□□□ -1.35
VTI1A-207ENST00000489357 EGR2P11161 476 aaPredicted RBP6.6□□□□□ -1.35
VTI1A-207ENST00000489357 HNF1AP20823 631 aa6.6□□□□□ -1.35
VTI1A-207ENST00000489357 RPL11P62913 178 aaKnown RBP6.6□□□□□ -1.35
VTI1A-207ENST00000489357 PRB3Q04118 309 aaPredicted RBP6.6□□□□□ -1.35
VTI1A-207ENST00000489357 OR5I1Q13606 314 aa6.6□□□□□ -1.35
VTI1A-207ENST00000489357 Q56UQ5 140 aa6.6□□□□□ -1.35
VTI1A-207ENST00000489357 FAM209BQ5JX69 171 aa6.6□□□□□ -1.35
VTI1A-207ENST00000489357 C1orf194Q5T5A4 169 aa6.6□□□□□ -1.35
VTI1A-207ENST00000489357 FAM162BQ5T6X4 162 aa6.6□□□□□ -1.35
VTI1A-207ENST00000489357 RUSC1-AS1Q66K80 236 aa6.6□□□□□ -1.35
VTI1A-207ENST00000489357 SIGLEC15Q6ZMC9 328 aa6.6□□□□□ -1.35
VTI1A-207ENST00000489357 COX8CQ7Z4L0 72 aa6.6□□□□□ -1.35
VTI1A-207ENST00000489357 Q86TA4 180 aa6.6□□□□□ -1.35
VTI1A-207ENST00000489357 FAM223AQ8IWN6 122 aa6.6□□□□□ -1.35
VTI1A-207ENST00000489357 C5orf56Q8N8D9 126 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms