RNA–Protein interactions for RNA: ENST00000489272.5

CBWD1-216, Transcript of COBW domain containing 1, humanhuman

TSL 5

Gene CBWD1, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-216ENST00000489272 PRM1P04553 51 aa-1.36□□□□□ -2.63
CBWD1-216ENST00000489272 AP2S1P53680 142 aaPredicted RBP-1.36□□□□□ -2.63
CBWD1-216ENST00000489272 RPL37AP61513 92 aaKnown RBP-1.36□□□□□ -2.63
CBWD1-216ENST00000489272 HIST3H3Q16695 136 aa-1.36□□□□□ -2.63
CBWD1-216ENST00000489272 ACOT6Q3I5F7 207 aaPredicted RBP-1.36□□□□□ -2.63
CBWD1-216ENST00000489272 FAM9CQ8IZT9 166 aa-1.36□□□□□ -2.63
CBWD1-216ENST00000489272 TMEM126AQ9H061 195 aa-1.36□□□□□ -2.63
CBWD1-216ENST00000489272 ROBO3Q96MS0 1386 aa-1.36□□□□□ -2.63
CBWD1-216ENST00000489272 C9orf84Q5VXU9 1444 aa-1.37□□□□□ -2.63
CBWD1-216ENST00000489272 PRORSD1PA6NEY8 169 aa-1.37□□□□□ -2.63
CBWD1-216ENST00000489272 NDUFB3O43676 98 aa-1.37□□□□□ -2.63
CBWD1-216ENST00000489272 C10orf111Q8N326 155 aa-1.37□□□□□ -2.63
CBWD1-216ENST00000489272 C12orf45Q8N5I9 185 aaPredicted RBP-1.37□□□□□ -2.63
CBWD1-216ENST00000489272 CSMD3Q7Z407 3707 aa-1.37□□□□□ -2.63
CBWD1-216ENST00000489272 MYO18BQ8IUG5 2567 aa-1.38□□□□□ -2.63
CBWD1-216ENST00000489272 TNNC2P02585 160 aa-1.38□□□□□ -2.63
CBWD1-216ENST00000489272 DNAH6Q9C0G6 4158 aa-1.38□□□□□ -2.63
CBWD1-216ENST00000489272 PKDREJQ9NTG1 2253 aa-1.38□□□□□ -2.63
CBWD1-216ENST00000489272 A0A0A6YYH2 397 aa-1.39□□□□□ -2.63
CBWD1-216ENST00000489272 A6NJ64 397 aa-1.39□□□□□ -2.63
CBWD1-216ENST00000489272 DEXIO95424 95 aa-1.39□□□□□ -2.63
CBWD1-216ENST00000489272 SMIM17P0DL12 118 aa-1.39□□□□□ -2.63
CBWD1-216ENST00000489272 PPIBP23284 216 aaKnown RBP-1.39□□□□□ -2.63
CBWD1-216ENST00000489272 KRR1Q13601 381 aaKnown RBP-1.39□□□□□ -2.63
CBWD1-216ENST00000489272 C22orf39Q6P5X5 142 aa-1.39□□□□□ -2.63
CBWD1-216ENST00000489272 LINC00299Q6ZSB3 139 aa-1.39□□□□□ -2.63
CBWD1-216ENST00000489272 ZCCHC23Q6ZST2 131 aa-1.39□□□□□ -2.63
CBWD1-216ENST00000489272 DCUN1D1Q96GG9 259 aa-1.39□□□□□ -2.63
CBWD1-216ENST00000489272 MYO5AQ9Y4I1 1855 aaKnown RBP-1.39□□□□□ -2.63
CBWD1-216ENST00000489272 MUC17Q685J3 4493 aa-1.4□□□□□ -2.63
CBWD1-216ENST00000489272 SPAG17Q6Q759 2223 aa-1.4□□□□□ -2.63
CBWD1-216ENST00000489272 RNF213Q63HN8 5207 aa-1.4□□□□□ -2.63
CBWD1-216ENST00000489272 TRAV27A0A087WT01 109 aa-1.4□□□□□ -2.63
CBWD1-216ENST00000489272 TGIF2-C20orf24A0A0A6YYL0 155 aa-1.4□□□□□ -2.63
CBWD1-216ENST00000489272 HAND1O96004 215 aa-1.4□□□□□ -2.63
CBWD1-216ENST00000489272 MYL5Q02045 173 aa-1.4□□□□□ -2.63
CBWD1-216ENST00000489272 GLYATL3Q5SZD4 288 aa-1.4□□□□□ -2.63
CBWD1-216ENST00000489272 Q6Q795 121 aa-1.4□□□□□ -2.63
CBWD1-216ENST00000489272 YPEL2Q96QA6 119 aa-1.4□□□□□ -2.63
CBWD1-216ENST00000489272 UCK1Q9HA47 277 aa-1.4□□□□□ -2.63
CBWD1-216ENST00000489272 TVP23BQ9NYZ1 205 aa-1.4□□□□□ -2.63
CBWD1-216ENST00000489272 USE1Q9NZ43 259 aa-1.4□□□□□ -2.63
CBWD1-216ENST00000489272 ATRQ13535 2644 aa-1.4□□□□□ -2.63
CBWD1-216ENST00000489272 CFDP00746 253 aaPredicted RBP-1.41□□□□□ -2.64
CBWD1-216ENST00000489272 TTRP02766 147 aa-1.41□□□□□ -2.64
CBWD1-216ENST00000489272 OR10J4P0C629 311 aa-1.41□□□□□ -2.64
CBWD1-216ENST00000489272 PDE6GP18545 87 aa-1.41□□□□□ -2.64
CBWD1-216ENST00000489272 VBP1P61758 197 aa-1.41□□□□□ -2.64
CBWD1-216ENST00000489272 OR2F1Q13607 317 aa-1.41□□□□□ -2.64
CBWD1-216ENST00000489272 FAM151BQ6UXP7 276 aa-1.41□□□□□ -2.64
CBWD1-216ENST00000489272 ARPINQ7Z6K5 226 aa-1.41□□□□□ -2.64
CBWD1-216ENST00000489272 OR6V1Q8N148 313 aa-1.41□□□□□ -2.64
CBWD1-216ENST00000489272 OR51A2Q8NGJ7 313 aa-1.41□□□□□ -2.64
CBWD1-216ENST00000489272 STAG3L4Q8TBR4 150 aa-1.41□□□□□ -2.64
CBWD1-216ENST00000489272 CT55Q8WUE5 264 aa-1.41□□□□□ -2.64
CBWD1-216ENST00000489272 NOSIPQ9Y314 301 aaKnown RBP-1.41□□□□□ -2.64
CBWD1-216ENST00000489272 COL24A1Q17RW2 1714 aa-1.41□□□□□ -2.64
CBWD1-216ENST00000489272 hCG_1818297A0A087WSY0 165 aa-1.42□□□□□ -2.64
CBWD1-216ENST00000489272 FAM236DA0A1B0GTK5 79 aa-1.42□□□□□ -2.64
CBWD1-216ENST00000489272 A8MT66 165 aa-1.42□□□□□ -2.64
CBWD1-216ENST00000489272 FAM236CP0DP71 79 aa-1.42□□□□□ -2.64
CBWD1-216ENST00000489272 SRIP30626 198 aa-1.42□□□□□ -2.64
CBWD1-216ENST00000489272 SERPINB9P50453 376 aa-1.42□□□□□ -2.64
CBWD1-216ENST00000489272 LYRM7Q5U5X0 104 aa-1.42□□□□□ -2.64
CBWD1-216ENST00000489272 PATE2Q6UY27 113 aa-1.42□□□□□ -2.64
CBWD1-216ENST00000489272 SLC25A40Q8TBP6 338 aa-1.42□□□□□ -2.64
CBWD1-216ENST00000489272 MIA2Q96PC5 1412 aa-1.42□□□□□ -2.64
CBWD1-216ENST00000489272 TACC2O95359 2948 aa-1.43□□□□□ -2.64
CBWD1-216ENST00000489272 CSPG4Q6UVK1 2322 aa-1.43□□□□□ -2.64
CBWD1-216ENST00000489272 A6NN06 94 aa-1.43□□□□□ -2.64
CBWD1-216ENST00000489272 SULT1C4O75897 302 aa-1.43□□□□□ -2.64
CBWD1-216ENST00000489272 IGHV3-33P01772 117 aa-1.43□□□□□ -2.64
CBWD1-216ENST00000489272 RAB5CP51148 216 aa-1.43□□□□□ -2.64
CBWD1-216ENST00000489272 S100A7AQ86SG5 101 aa-1.43□□□□□ -2.64
CBWD1-216ENST00000489272 POP5Q969H6 163 aaKnown RBP-1.43□□□□□ -2.64
CBWD1-216ENST00000489272 LIMD2Q9BT23 127 aa-1.43□□□□□ -2.64
CBWD1-216ENST00000489272 ARL5AQ9Y689 179 aa-1.43□□□□□ -2.64
CBWD1-216ENST00000489272 NIPBLQ6KC79 2804 aaeCLIP-1.43□□□□□ -2.64
CBWD1-216ENST00000489272 DSPP15924 2871 aaKnown RBP-1.43□□□□□ -2.64
CBWD1-216ENST00000489272 A0A096LPI6 279 aa-1.44□□□□□ -2.64
CBWD1-216ENST00000489272 A0A0J9YY99 117 aa-1.44□□□□□ -2.64
CBWD1-216ENST00000489272 TGOLN2O43493 480 aa-1.44□□□□□ -2.64
CBWD1-216ENST00000489272 IGLV1-51P01701 117 aa-1.44□□□□□ -2.64
CBWD1-216ENST00000489272 CALB1P05937 261 aa-1.44□□□□□ -2.64
CBWD1-216ENST00000489272 HIST1H1EP10412 219 aaKnown RBP-1.44□□□□□ -2.64
CBWD1-216ENST00000489272 RANP62826 216 aaKnown RBP-1.44□□□□□ -2.64
CBWD1-216ENST00000489272 PRRC2CQ9Y520 2896 aaKnown RBP-1.44□□□□□ -2.64
CBWD1-216ENST00000489272 USP9XQ93008 2570 aaPredicted RBP-1.45□□□□□ -2.64
CBWD1-216ENST00000489272 DOCK4Q8N1I0 1966 aa-1.45□□□□□ -2.64
CBWD1-216ENST00000489272 NCOA1Q15788 1441 aa-1.45□□□□□ -2.64
CBWD1-216ENST00000489272 CHP2O43745 196 aa-1.45□□□□□ -2.64
CBWD1-216ENST00000489272 C8GP07360 202 aa-1.45□□□□□ -2.64
CBWD1-216ENST00000489272 SULT1A1P50225 295 aa-1.45□□□□□ -2.64
CBWD1-216ENST00000489272 XAF1Q6GPH4 301 aa-1.45□□□□□ -2.64
CBWD1-216ENST00000489272 EIF5AL1Q6IS14 154 aaKnown RBP-1.45□□□□□ -2.64
CBWD1-216ENST00000489272 TMEM14EPQ6UXP3 125 aa-1.45□□□□□ -2.64
CBWD1-216ENST00000489272 PTH2Q96A98 100 aa-1.45□□□□□ -2.64
CBWD1-216ENST00000489272 PI4KAP42356 2102 aa-1.45□□□□□ -2.64
CBWD1-216ENST00000489272 MED13LQ71F56 2210 aa-1.46□□□□□ -2.64
CBWD1-216ENST00000489272 CHD8Q9HCK8 2581 aa-1.46□□□□□ -2.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms