RNA–Protein interactions for RNA: ENST00000489030.1

USP11-210, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 2

Gene USP11, Length 340 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-210ENST00000489030 TMED6Q8WW62 240 aa8.48□□□□□ -1.05
USP11-210ENST00000489030 UHRF2Q96PU4 802 aa8.48□□□□□ -1.05
USP11-210ENST00000489030 SHANK2-AS3Q9BTD1 123 aa8.48□□□□□ -1.05
USP11-210ENST00000489030 ACTR3CQ9C0K3 210 aaPredicted RBP8.48□□□□□ -1.05
USP11-210ENST00000489030 FUT9Q9Y231 359 aa8.48□□□□□ -1.05
USP11-210ENST00000489030 IGHV3-49A0A0A0MS15 119 aa8.47□□□□□ -1.05
USP11-210ENST00000489030 HELTA6NFD8 242 aa8.47□□□□□ -1.05
USP11-210ENST00000489030 TAS2R45P59539 299 aa8.47□□□□□ -1.05
USP11-210ENST00000489030 RAB2AP61019 212 aa8.47□□□□□ -1.05
USP11-210ENST00000489030 GCSAMLQ5JQS6 135 aa8.47□□□□□ -1.05
USP11-210ENST00000489030 FAM122CQ6P4D5 195 aa8.47□□□□□ -1.05
USP11-210ENST00000489030 DPPA3Q6W0C5 159 aa8.47□□□□□ -1.05
USP11-210ENST00000489030 BPIFA4PQ86YQ2 179 aa8.47□□□□□ -1.05
USP11-210ENST00000489030 SLC25A22Q9H936 323 aa8.47□□□□□ -1.05
USP11-210ENST00000489030 SEPSECSQ9HD40 501 aaKnown RBP8.47□□□□□ -1.05
USP11-210ENST00000489030 RPRMQ9NS64 109 aa8.47□□□□□ -1.05
USP11-210ENST00000489030 IGHV3OR16-13A0A075B7E8 117 aa8.46□□□□□ -1.06
USP11-210ENST00000489030 LOC102724200A0A096LPH7 203 aaPredicted RBP8.46□□□□□ -1.06
USP11-210ENST00000489030 IGHV3-74A0A0B4J1X5 117 aa8.46□□□□□ -1.06
USP11-210ENST00000489030 TRAV25A0A0B4J276 109 aa8.46□□□□□ -1.06
USP11-210ENST00000489030 IGHV3-66A0A0C4DH42 116 aa8.46□□□□□ -1.06
USP11-210ENST00000489030 NUPR2A6NF83 97 aa8.46□□□□□ -1.06
USP11-210ENST00000489030 RPL7P18124 248 aaKnown RBP8.46□□□□□ -1.06
USP11-210ENST00000489030 GALR1P47211 349 aa8.46□□□□□ -1.06
USP11-210ENST00000489030 CDC34P49427 236 aaPredicted RBP8.46□□□□□ -1.06
USP11-210ENST00000489030 SULT1A2P50226 295 aa8.46□□□□□ -1.06
USP11-210ENST00000489030 PAFAH1B2P68402 229 aa8.46□□□□□ -1.06
USP11-210ENST00000489030 DEFB135Q30KP9 77 aa8.46□□□□□ -1.06
USP11-210ENST00000489030 RBPMS2Q6ZRY4 209 aaKnown RBP8.46□□□□□ -1.06
USP11-210ENST00000489030 STXBP6Q8NFX7 210 aa8.46□□□□□ -1.06
USP11-210ENST00000489030 SCRT1Q9BWW7 348 aa8.46□□□□□ -1.06
USP11-210ENST00000489030 VPS13DQ5THJ4 4388 aa8.46□□□□□ -1.06
USP11-210ENST00000489030 HECTD4Q9Y4D8 3996 aa8.45□□□□□ -1.06
USP11-210ENST00000489030 CTXND1A0A1B0GTU2 59 aa8.45□□□□□ -1.06
USP11-210ENST00000489030 RPL11P62913 178 aaKnown RBP8.45□□□□□ -1.06
USP11-210ENST00000489030 KHDC3LQ587J8 217 aa8.45□□□□□ -1.06
USP11-210ENST00000489030 LEMD1Q68G75 181 aa8.45□□□□□ -1.06
USP11-210ENST00000489030 TEX261Q6UWH6 196 aa8.45□□□□□ -1.06
USP11-210ENST00000489030 ALKAL2Q6UX46 152 aa8.45□□□□□ -1.06
USP11-210ENST00000489030 SIGLEC15Q6ZMC9 328 aa8.45□□□□□ -1.06
USP11-210ENST00000489030 MIR17HGQ75NE6 70 aa8.45□□□□□ -1.06
USP11-210ENST00000489030 TCF24Q7RTU0 167 aa8.45□□□□□ -1.06
USP11-210ENST00000489030 RNF141Q8WVD5 230 aa8.45□□□□□ -1.06
USP11-210ENST00000489030 GLMPQ8WWB7 406 aa8.45□□□□□ -1.06
USP11-210ENST00000489030 UBQLN2Q9UHD9 624 aa8.45□□□□□ -1.06
USP11-210ENST00000489030 TRAV5A0A0B4J249 113 aa8.44□□□□□ -1.06
USP11-210ENST00000489030 IFNA7P01567 189 aa8.44□□□□□ -1.06
USP11-210ENST00000489030 ATF4P18848 351 aaPredicted RBP8.44□□□□□ -1.06
USP11-210ENST00000489030 MEOX2P50222 304 aa8.44□□□□□ -1.06
USP11-210ENST00000489030 MORN5Q5VZ52 161 aa8.44□□□□□ -1.06
USP11-210ENST00000489030 SPATA31B1PQ5VZV4 182 aa8.44□□□□□ -1.06
USP11-210ENST00000489030 FAM90A2PQ658T7 463 aa8.44□□□□□ -1.06
USP11-210ENST00000489030 PQLC2Q6ZP29 291 aa8.44□□□□□ -1.06
USP11-210ENST00000489030 WFDC3Q8IUB2 231 aa8.44□□□□□ -1.06
USP11-210ENST00000489030 FAM213BQ8TBF2 198 aa8.44□□□□□ -1.06
USP11-210ENST00000489030 LRRC20Q8TCA0 184 aa8.44□□□□□ -1.06
USP11-210ENST00000489030 RAB24Q969Q5 203 aa8.44□□□□□ -1.06
USP11-210ENST00000489030 OR51M1Q9H341 326 aa8.44□□□□□ -1.06
USP11-210ENST00000489030 PLA2G2EQ9NZK7 142 aa8.44□□□□□ -1.06
USP11-210ENST00000489030 TMEM14CQ9P0S9 112 aa8.44□□□□□ -1.06
USP11-210ENST00000489030 TEX46H3BTG2 121 aa8.43□□□□□ -1.06
USP11-210ENST00000489030 DNASE2O00115 360 aaPredicted RBP8.43□□□□□ -1.06
USP11-210ENST00000489030 TSPAN4O14817 238 aa8.43□□□□□ -1.06
USP11-210ENST00000489030 SPRY2O43597 315 aa8.43□□□□□ -1.06
USP11-210ENST00000489030 OR7C2O60412 319 aa8.43□□□□□ -1.06
USP11-210ENST00000489030 CXorf1O96002 111 aa8.43□□□□□ -1.06
USP11-210ENST00000489030 H2AFB1P0C5Y9 115 aa8.43□□□□□ -1.06
USP11-210ENST00000489030 STAG3L2P0CL84 134 aa8.43□□□□□ -1.06
USP11-210ENST00000489030 STAG3L3P0CL85 134 aa8.43□□□□□ -1.06
USP11-210ENST00000489030 BLOC1S1P78537 153 aa8.43□□□□□ -1.06
USP11-210ENST00000489030 ZNF680Q8NEM1 530 aa8.43□□□□□ -1.06
USP11-210ENST00000489030 PHLDA1Q8WV24 401 aaPredicted RBP8.43□□□□□ -1.06
USP11-210ENST00000489030 MBD3L1Q8WWY6 194 aa8.43□□□□□ -1.06
USP11-210ENST00000489030 FAM167A-AS1Q96KT0 104 aa8.43□□□□□ -1.06
USP11-210ENST00000489030 PAXXQ9BUH6 204 aa8.43□□□□□ -1.06
USP11-210ENST00000489030 SLC25A2Q9BXI2 301 aa8.43□□□□□ -1.06
USP11-210ENST00000489030 ABCA13Q86UQ4 5058 aa8.43□□□□□ -1.06
USP11-210ENST00000489030 HIST1H1EP10412 219 aaKnown RBP8.42□□□□□ -1.06
USP11-210ENST00000489030 GUK1Q16774 197 aa8.42□□□□□ -1.06
USP11-210ENST00000489030 SAMD13Q5VXD3 122 aa8.42□□□□□ -1.06
USP11-210ENST00000489030 SAT2Q96F10 170 aaPredicted RBP8.42□□□□□ -1.06
USP11-210ENST00000489030 IGKV3-7A0A075B6H7 116 aa8.41□□□□□ -1.06
USP11-210ENST00000489030 A0A087X0K7 114 aa8.41□□□□□ -1.06
USP11-210ENST00000489030 TRAV2A0A0B4J234 112 aa8.41□□□□□ -1.06
USP11-210ENST00000489030 ZNF705EA8MWA4 302 aaPredicted RBP8.41□□□□□ -1.06
USP11-210ENST00000489030 MRPS12O15235 138 aaKnown RBP8.41□□□□□ -1.06
USP11-210ENST00000489030 HMGB3O15347 200 aaKnown RBP8.41□□□□□ -1.06
USP11-210ENST00000489030 HBE1P02100 147 aa8.41□□□□□ -1.06
USP11-210ENST00000489030 NBEAP1P0C6P0 100 aa8.41□□□□□ -1.06
USP11-210ENST00000489030 RPL35AP18077 110 aaKnown RBP8.41□□□□□ -1.06
USP11-210ENST00000489030 FHITP49789 147 aa8.41□□□□□ -1.06
USP11-210ENST00000489030 CMC4P56277 68 aaPredicted RBP8.41□□□□□ -1.06
USP11-210ENST00000489030 ZNF726P1Q15940 193 aa8.41□□□□□ -1.06
USP11-210ENST00000489030 ODF3L2Q3SX64 289 aa8.41□□□□□ -1.06
USP11-210ENST00000489030 FAM74A1Q5RGS3 127 aa8.41□□□□□ -1.06
USP11-210ENST00000489030 LGALS9CQ6DKI2 356 aa8.41□□□□□ -1.06
USP11-210ENST00000489030 LCN15Q6UWW0 184 aa8.41□□□□□ -1.06
USP11-210ENST00000489030 SFT2D1Q8WV19 159 aa8.41□□□□□ -1.06
USP11-210ENST00000489030 RNF183Q96D59 192 aa8.41□□□□□ -1.06
USP11-210ENST00000489030 SPAG8Q99932 426 aaPredicted RBP8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms