RNA–Protein interactions for RNA: ENST00000488989.1

CLDN11-208, Transcript of claudin 11, humanhuman

TSL 4

Gene CLDN11, Length 600 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-208ENST00000488989 IQCF2Q8IXL9 164 aa12.07□□□□□ -0.48
CLDN11-208ENST00000488989 LYPD1Q8N2G4 141 aa12.07□□□□□ -0.48
CLDN11-208ENST00000488989 DYNLRB2Q8TF09 96 aa12.07□□□□□ -0.48
CLDN11-208ENST00000488989 FAM210AQ96ND0 272 aa12.07□□□□□ -0.48
CLDN11-208ENST00000488989 GNG13Q9P2W3 67 aa12.07□□□□□ -0.48
CLDN11-208ENST00000488989 FAM74A7A6NL05 159 aa12.06□□□□□ -0.48
CLDN11-208ENST00000488989 SOCS3O14543 225 aa12.06□□□□□ -0.48
CLDN11-208ENST00000488989 IFNA1P01562 189 aa12.06□□□□□ -0.48
CLDN11-208ENST00000488989 IGLV1-51P01701 117 aa12.06□□□□□ -0.48
CLDN11-208ENST00000488989 OR2K2Q8NGT1 345 aa12.06□□□□□ -0.48
CLDN11-208ENST00000488989 SPATA3Q8NHX4 192 aa12.06□□□□□ -0.48
CLDN11-208ENST00000488989 NRN1Q9NPD7 142 aa12.06□□□□□ -0.48
CLDN11-208ENST00000488989 TRAV2A0A0B4J234 112 aa12.05□□□□□ -0.48
CLDN11-208ENST00000488989 LOC102723971A0A1B0GUV8 181 aa12.05□□□□□ -0.48
CLDN11-208ENST00000488989 RAB19A4D1S5 217 aa12.05□□□□□ -0.48
CLDN11-208ENST00000488989 TSPAN4O14817 238 aa12.05□□□□□ -0.48
CLDN11-208ENST00000488989 PAGE4O60829 102 aa12.05□□□□□ -0.48
CLDN11-208ENST00000488989 NDUFS6O75380 124 aaKnown RBP12.05□□□□□ -0.48
CLDN11-208ENST00000488989 SNRPCP09234 159 aaKnown RBP12.05□□□□□ -0.48
CLDN11-208ENST00000488989 BCL2P10415 239 aa12.05□□□□□ -0.48
CLDN11-208ENST00000488989 INSL3P51460 131 aa12.05□□□□□ -0.48
CLDN11-208ENST00000488989 ZNF506Q5JVG8 444 aa12.05□□□□□ -0.48
CLDN11-208ENST00000488989 SAMD13Q5VXD3 122 aa12.05□□□□□ -0.48
CLDN11-208ENST00000488989 DCANP1Q8TF63 244 aa12.05□□□□□ -0.48
CLDN11-208ENST00000488989 BLNKQ8WV28 456 aa12.05□□□□□ -0.48
CLDN11-208ENST00000488989 TXNDC17Q9BRA2 123 aa12.05□□□□□ -0.48
CLDN11-208ENST00000488989 SLC50A1Q9BRV3 221 aa12.05□□□□□ -0.48
CLDN11-208ENST00000488989 MCRIP2Q9BUT9 160 aaKnown RBP12.05□□□□□ -0.48
CLDN11-208ENST00000488989 NKX6-2Q9C056 277 aaPredicted RBP12.05□□□□□ -0.48
CLDN11-208ENST00000488989 ZNF331Q9NQX6 463 aaPredicted RBP12.05□□□□□ -0.48
CLDN11-208ENST00000488989 YTHDF2Q9Y5A9 579 aaKnown RBP12.05□□□□□ -0.48
CLDN11-208ENST00000488989 RBFOX3A6NFN3 312 aa12.04□□□□□ -0.48
CLDN11-208ENST00000488989 H3BTX0 84 aa12.04□□□□□ -0.48
CLDN11-208ENST00000488989 SLC17A3O00476 420 aa12.04□□□□□ -0.48
CLDN11-208ENST00000488989 SAP30O75446 220 aa12.04□□□□□ -0.48
CLDN11-208ENST00000488989 PSG9Q00887 426 aa12.04□□□□□ -0.48
CLDN11-208ENST00000488989 CD300EQ496F6 205 aaPredicted RBP12.04□□□□□ -0.48
CLDN11-208ENST00000488989 C9orf66Q5T8R8 295 aa12.04□□□□□ -0.48
CLDN11-208ENST00000488989 CCDC28AQ8IWP9 274 aa12.04□□□□□ -0.48
CLDN11-208ENST00000488989 TMEM61Q8N0U2 210 aa12.04□□□□□ -0.48
CLDN11-208ENST00000488989 MS4A6AQ9H2W1 248 aa12.04□□□□□ -0.48
CLDN11-208ENST00000488989 CLEC5AQ9NY25 188 aa12.04□□□□□ -0.48
CLDN11-208ENST00000488989 VAX2Q9UIW0 290 aa12.04□□□□□ -0.48
CLDN11-208ENST00000488989 SORL1Q92673 2214 aa12.04□□□□□ -0.48
CLDN11-208ENST00000488989 TRAV8-2A0A0B4J237 113 aa12.03□□□□□ -0.48
CLDN11-208ENST00000488989 GGTLC3B5MD39 225 aa12.03□□□□□ -0.48
CLDN11-208ENST00000488989 K7EQG2 157 aa12.03□□□□□ -0.48
CLDN11-208ENST00000488989 WIPF1O43516 503 aa12.03□□□□□ -0.48
CLDN11-208ENST00000488989 CD33P20138 364 aa12.03□□□□□ -0.48
CLDN11-208ENST00000488989 UBE2G2P60604 165 aa12.03□□□□□ -0.48
CLDN11-208ENST00000488989 RPL11P62913 178 aaKnown RBP12.03□□□□□ -0.48
CLDN11-208ENST00000488989 HAGHQ16775 308 aa12.03□□□□□ -0.48
CLDN11-208ENST00000488989 Q9H3A6 140 aa12.03□□□□□ -0.48
CLDN11-208ENST00000488989 OTORQ9NRC9 128 aa12.03□□□□□ -0.48
CLDN11-208ENST00000488989 SELENOKQ9Y6D0 94 aa12.03□□□□□ -0.48
CLDN11-208ENST00000488989 ISLRO14498 428 aa12.02□□□□□ -0.49
CLDN11-208ENST00000488989 RANP62826 216 aaKnown RBP12.02□□□□□ -0.49
CLDN11-208ENST00000488989 PAFAH1B2P68402 229 aa12.02□□□□□ -0.49
CLDN11-208ENST00000488989 ICAM4Q14773 271 aa12.02□□□□□ -0.49
CLDN11-208ENST00000488989 TOR2AQ5JU69 321 aa12.02□□□□□ -0.49
CLDN11-208ENST00000488989 RBPMS2Q6ZRY4 209 aaKnown RBP12.02□□□□□ -0.49
CLDN11-208ENST00000488989 EIF4E3Q8N5X7 224 aaKnown RBP12.02□□□□□ -0.49
CLDN11-208ENST00000488989 ARL6IP6Q8N6S5 226 aa12.02□□□□□ -0.49
CLDN11-208ENST00000488989 SPAG8Q99932 426 aaPredicted RBP12.02□□□□□ -0.49
CLDN11-208ENST00000488989 RARRES2Q99969 163 aa12.02□□□□□ -0.49
CLDN11-208ENST00000488989 SMDT1Q9H4I9 107 aa12.02□□□□□ -0.49
CLDN11-208ENST00000488989 NOTCH3Q9UM47 2321 aa12.02□□□□□ -0.49
CLDN11-208ENST00000488989 PGPA6NDG6 321 aa12.01□□□□□ -0.49
CLDN11-208ENST00000488989 C11orf94C9JXX5 98 aa12.01□□□□□ -0.49
CLDN11-208ENST00000488989 ATP5G3P48201 142 aa12.01□□□□□ -0.49
CLDN11-208ENST00000488989 CD81P60033 236 aa12.01□□□□□ -0.49
CLDN11-208ENST00000488989 SUMO1P63165 101 aaKnown RBP12.01□□□□□ -0.49
CLDN11-208ENST00000488989 MEF2BQ02080 365 aaPredicted RBP12.01□□□□□ -0.49
CLDN11-208ENST00000488989 CST9LP1Q5W188 147 aa12.01□□□□□ -0.49
CLDN11-208ENST00000488989 MRPL53Q96EL3 112 aaKnown RBP12.01□□□□□ -0.49
CLDN11-208ENST00000488989 C16orf92Q96LL3 132 aa12.01□□□□□ -0.49
CLDN11-208ENST00000488989 TCEAL7Q9BRU2 100 aa12.01□□□□□ -0.49
CLDN11-208ENST00000488989 PRELID1Q9Y255 219 aa12.01□□□□□ -0.49
CLDN11-208ENST00000488989 IGKV3-7A0A075B6H7 116 aa12□□□□□ -0.49
CLDN11-208ENST00000488989 IZUMO1RA6ND01 250 aa12□□□□□ -0.49
CLDN11-208ENST00000488989 NDUFA5Q16718 116 aa12□□□□□ -0.49
CLDN11-208ENST00000488989 COMMD7Q86VX2 200 aa12□□□□□ -0.49
CLDN11-208ENST00000488989 EXOC3-AS1Q8N2X6 119 aa12□□□□□ -0.49
CLDN11-208ENST00000488989 GBGT1Q8N5D6 347 aa12□□□□□ -0.49
CLDN11-208ENST00000488989 EIF5A2Q9GZV4 153 aaKnown RBP12□□□□□ -0.49
CLDN11-208ENST00000488989 AAMDCQ9H7C9 122 aa12□□□□□ -0.49
CLDN11-208ENST00000488989 ZNF256Q9Y2P7 627 aaPredicted RBP12□□□□□ -0.49
CLDN11-208ENST00000488989 DNASE2O00115 360 aaPredicted RBP11.99□□□□□ -0.49
CLDN11-208ENST00000488989 ID1P41134 155 aa11.99□□□□□ -0.49
CLDN11-208ENST00000488989 SRSF3P84103 164 aaKnown RBP11.99□□□□□ -0.49
CLDN11-208ENST00000488989 PEA15Q15121 130 aa11.99□□□□□ -0.49
CLDN11-208ENST00000488989 PSG3Q16557 428 aa11.99□□□□□ -0.49
CLDN11-208ENST00000488989 PRR31Q5SQ13 230 aa11.99□□□□□ -0.49
CLDN11-208ENST00000488989 LCN12Q6JVE5 192 aa11.99□□□□□ -0.49
CLDN11-208ENST00000488989 UQCC3Q6UW78 93 aa11.99□□□□□ -0.49
CLDN11-208ENST00000488989 C5orf17Q8NAS9 161 aa11.99□□□□□ -0.49
CLDN11-208ENST00000488989 RXFP4Q8TDU9 374 aa11.99□□□□□ -0.49
CLDN11-208ENST00000488989 GPR61Q9BZJ8 451 aa11.99□□□□□ -0.49
CLDN11-208ENST00000488989 OR4C46A6NHA9 309 aa11.98□□□□□ -0.49
CLDN11-208ENST00000488989 F6UZH7 168 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms