RNA–Protein interactions for RNA: ENST00000488683.1

CLIC4-202, Transcript of chloride intracellular channel 4, humanhuman

TSL 2

Gene CLIC4, Length 2,723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-202ENST00000488683 Q8TAT8 98 aa9.97□□□□□ -0.81
CLIC4-202ENST00000488683 CHRDL1Q9BU40 450 aa9.97□□□□□ -0.81
CLIC4-202ENST00000488683 OVOL3O00110 214 aa9.96□□□□□ -0.81
CLIC4-202ENST00000488683 NBR2O15453 112 aa9.96□□□□□ -0.81
CLIC4-202ENST00000488683 ATP5L2Q7Z4Y8 100 aa9.96□□□□□ -0.81
CLIC4-202ENST00000488683 ZNF491Q8N8L2 437 aa9.96□□□□□ -0.81
CLIC4-202ENST00000488683 OTORQ9NRC9 128 aa9.96□□□□□ -0.81
CLIC4-202ENST00000488683 IGKV2-40A0A087WW87 121 aaPredicted RBP9.96□□□□□ -0.82
CLIC4-202ENST00000488683 IGHV3-49A0A0A0MS15 119 aa9.96□□□□□ -0.82
CLIC4-202ENST00000488683 IGKV2D-40P01614 121 aaPredicted RBP9.96□□□□□ -0.82
CLIC4-202ENST00000488683 IGLC2P0DOY2 106 aa9.96□□□□□ -0.82
CLIC4-202ENST00000488683 IGLC3P0DOY3 106 aa9.96□□□□□ -0.82
CLIC4-202ENST00000488683 FAM120AOSQ5T036 256 aa9.96□□□□□ -0.82
CLIC4-202ENST00000488683 OR4B1Q8NGF8 309 aa9.96□□□□□ -0.82
CLIC4-202ENST00000488683 TMEM208Q9BTX3 173 aa9.96□□□□□ -0.82
CLIC4-202ENST00000488683 TMEM14CQ9P0S9 112 aa9.96□□□□□ -0.82
CLIC4-202ENST00000488683 ZNF492Q9P255 531 aa9.96□□□□□ -0.82
CLIC4-202ENST00000488683 DPM3Q9P2X0 92 aa9.96□□□□□ -0.82
CLIC4-202ENST00000488683 IGHV1-24A0A0C4DH33 117 aa9.95□□□□□ -0.82
CLIC4-202ENST00000488683 C2orf70A6NJV1 201 aa9.95□□□□□ -0.82
CLIC4-202ENST00000488683 RPLP1P05386 114 aaKnown RBP9.95□□□□□ -0.82
CLIC4-202ENST00000488683 IGLL1P15814 213 aa9.95□□□□□ -0.82
CLIC4-202ENST00000488683 FOXE3Q13461 319 aa9.95□□□□□ -0.82
CLIC4-202ENST00000488683 RNF125Q96EQ8 232 aa9.95□□□□□ -0.82
CLIC4-202ENST00000488683 CFAP46Q8IYW2 2715 aa9.95□□□□□ -0.82
CLIC4-202ENST00000488683 TRBV19A0A075B6N1 114 aa9.95□□□□□ -0.82
CLIC4-202ENST00000488683 IGHV3OR16-10A0A075B7F0 116 aa9.95□□□□□ -0.82
CLIC4-202ENST00000488683 A8MWL6 223 aa9.95□□□□□ -0.82
CLIC4-202ENST00000488683 CHEK1O14757 476 aa9.95□□□□□ -0.82
CLIC4-202ENST00000488683 GNG7O60262 68 aa9.95□□□□□ -0.82
CLIC4-202ENST00000488683 HOXB4P17483 251 aaPredicted RBP9.95□□□□□ -0.82
CLIC4-202ENST00000488683 LY6DQ14210 128 aa9.95□□□□□ -0.82
CLIC4-202ENST00000488683 TMEM75Q8N9X5 138 aa9.95□□□□□ -0.82
CLIC4-202ENST00000488683 OR11H6Q8NGC7 330 aa9.95□□□□□ -0.82
CLIC4-202ENST00000488683 RNF5Q99942 180 aa9.95□□□□□ -0.82
CLIC4-202ENST00000488683 SHANK2-AS3Q9BTD1 123 aa9.95□□□□□ -0.82
CLIC4-202ENST00000488683 LOC389332A0A1B0GUA5 103 aa9.94□□□□□ -0.82
CLIC4-202ENST00000488683 NPIPB6E9PJ23 425 aa9.94□□□□□ -0.82
CLIC4-202ENST00000488683 H3BRN7 92 aa9.94□□□□□ -0.82
CLIC4-202ENST00000488683 NDUFB8O95169 186 aa9.94□□□□□ -0.82
CLIC4-202ENST00000488683 HLA-DRB1P01911 266 aa9.94□□□□□ -0.82
CLIC4-202ENST00000488683 SIGLEC15Q6ZMC9 328 aa9.94□□□□□ -0.82
CLIC4-202ENST00000488683 VMO1Q7Z5L0 202 aa9.94□□□□□ -0.82
CLIC4-202ENST00000488683 FANCD2OSQ96PS1 177 aa9.94□□□□□ -0.82
CLIC4-202ENST00000488683 LINC01548A6NM66 108 aa9.94□□□□□ -0.82
CLIC4-202ENST00000488683 CT83Q5H943 113 aa9.94□□□□□ -0.82
CLIC4-202ENST00000488683 TMUB1Q9BVT8 246 aa9.94□□□□□ -0.82
CLIC4-202ENST00000488683 LOC105371242A0A075B767 164 aa9.93□□□□□ -0.82
CLIC4-202ENST00000488683 TMEM213A2RRL7 107 aa9.93□□□□□ -0.82
CLIC4-202ENST00000488683 F8W735 103 aaPredicted RBP9.93□□□□□ -0.82
CLIC4-202ENST00000488683 MRPS12O15235 138 aaKnown RBP9.93□□□□□ -0.82
CLIC4-202ENST00000488683 SNAI2O43623 268 aa9.93□□□□□ -0.82
CLIC4-202ENST00000488683 NDUFA3O95167 84 aa9.93□□□□□ -0.82
CLIC4-202ENST00000488683 HNRNPA3P51991 378 aaKnown RBP9.93□□□□□ -0.82
CLIC4-202ENST00000488683 RBPMS2Q6ZRY4 209 aaKnown RBP9.93□□□□□ -0.82
CLIC4-202ENST00000488683 SERTM2A0A1B0GWG4 89 aa9.93□□□□□ -0.82
CLIC4-202ENST00000488683 ODF3BA8MYP8 253 aa9.93□□□□□ -0.82
CLIC4-202ENST00000488683 APOHP02749 345 aaPredicted RBP9.93□□□□□ -0.82
CLIC4-202ENST00000488683 LOXL1Q08397 574 aaPredicted RBP9.93□□□□□ -0.82
CLIC4-202ENST00000488683 NPBQ8NG41 125 aa9.93□□□□□ -0.82
CLIC4-202ENST00000488683 RAB1BQ9H0U4 201 aa9.93□□□□□ -0.82
CLIC4-202ENST00000488683 LINC00527Q9UJ94 153 aa9.93□□□□□ -0.82
CLIC4-202ENST00000488683 PSG8Q9UQ74 426 aa9.93□□□□□ -0.82
CLIC4-202ENST00000488683 ZANQ9Y493 2812 aa9.93□□□□□ -0.82
CLIC4-202ENST00000488683 SMKR1H3BMG3 65 aa9.92□□□□□ -0.82
CLIC4-202ENST00000488683 ZNF207O43670 478 aaKnown RBP9.92□□□□□ -0.82
CLIC4-202ENST00000488683 C11orf71Q6IPW1 123 aa9.92□□□□□ -0.82
CLIC4-202ENST00000488683 UNQ5815/PRO19632Q6UWF5 114 aa9.92□□□□□ -0.82
CLIC4-202ENST00000488683 BPIFA4PQ86YQ2 179 aa9.92□□□□□ -0.82
CLIC4-202ENST00000488683 ZNF414Q96IQ9 312 aa9.92□□□□□ -0.82
CLIC4-202ENST00000488683 BTF3P20290 206 aaKnown RBP9.92□□□□□ -0.82
CLIC4-202ENST00000488683 C5orf64Q2M2E5 130 aa9.92□□□□□ -0.82
CLIC4-202ENST00000488683 OR4F17Q8NGA8 305 aa9.92□□□□□ -0.82
CLIC4-202ENST00000488683 SRSF8Q9BRL6 282 aaKnown RBP9.92□□□□□ -0.82
CLIC4-202ENST00000488683 C1RLQ9NZP8 487 aa9.92□□□□□ -0.82
CLIC4-202ENST00000488683 ECSCRQ19T08 205 aa9.91□□□□□ -0.82
CLIC4-202ENST00000488683 C16orf54Q6UWD8 224 aa9.91□□□□□ -0.82
CLIC4-202ENST00000488683 GFRA4Q9GZZ7 299 aa9.91□□□□□ -0.82
CLIC4-202ENST00000488683 IGLV11-55A0A075B6I3 123 aa9.91□□□□□ -0.82
CLIC4-202ENST00000488683 LOC102724200A0A096LPH7 203 aaPredicted RBP9.91□□□□□ -0.82
CLIC4-202ENST00000488683 PPIFP30405 207 aaKnown RBP9.91□□□□□ -0.82
CLIC4-202ENST00000488683 WFDC3Q8IUB2 231 aa9.91□□□□□ -0.82
CLIC4-202ENST00000488683 WI2-2373I1.2A0A1W2PRP0 233 aa9.91□□□□□ -0.82
CLIC4-202ENST00000488683 OR4C46A6NHA9 309 aa9.91□□□□□ -0.82
CLIC4-202ENST00000488683 PRTN3P24158 256 aa9.91□□□□□ -0.82
CLIC4-202ENST00000488683 RNF182Q8N6D2 247 aa9.91□□□□□ -0.82
CLIC4-202ENST00000488683 TIMD4Q96H15 378 aa9.91□□□□□ -0.82
CLIC4-202ENST00000488683 VGLL1Q99990 258 aa9.91□□□□□ -0.82
CLIC4-202ENST00000488683 NCR2O95944 276 aa9.9□□□□□ -0.82
CLIC4-202ENST00000488683 ZNF80P51504 273 aaPredicted RBP9.9□□□□□ -0.82
CLIC4-202ENST00000488683 ERCC8Q13216 396 aa9.9□□□□□ -0.82
CLIC4-202ENST00000488683 Q6ZQT7 251 aa9.9□□□□□ -0.82
CLIC4-202ENST00000488683 ARPC1AQ92747 370 aa9.9□□□□□ -0.82
CLIC4-202ENST00000488683 UQCR10Q9UDW1 63 aa9.9□□□□□ -0.82
CLIC4-202ENST00000488683 LAMTOR2Q9Y2Q5 125 aa9.9□□□□□ -0.82
CLIC4-202ENST00000488683 GOLT1BQ9Y3E0 138 aa9.9□□□□□ -0.82
CLIC4-202ENST00000488683 ABCA2Q9BZC7 2435 aa9.9□□□□□ -0.83
CLIC4-202ENST00000488683 NPIPB5A8MRT5 1133 aa9.9□□□□□ -0.83
CLIC4-202ENST00000488683 G3V318 75 aa9.9□□□□□ -0.83
CLIC4-202ENST00000488683 M0QZK8 103 aa9.9□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms