RNA–Protein interactions for RNA: ENST00000488454.5

SKA1-204, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 3 BASIC

Gene SKA1, Length 669 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-204ENST00000488454 CMYA5Q8N3K9 4069 aa7.71□□□□□ -1.18
SKA1-204ENST00000488454 MGAM2Q2M2H8 2515 aa7.7□□□□□ -1.18
SKA1-204ENST00000488454 OR11H12B2RN74 326 aa7.7□□□□□ -1.18
SKA1-204ENST00000488454 UMAD1C9J7I0 102 aa7.7□□□□□ -1.18
SKA1-204ENST00000488454 K7EQG2 157 aa7.7□□□□□ -1.18
SKA1-204ENST00000488454 OR7C2O60412 319 aa7.7□□□□□ -1.18
SKA1-204ENST00000488454 CDC34P49427 236 aaPredicted RBP7.7□□□□□ -1.18
SKA1-204ENST00000488454 GUK1Q16774 197 aa7.7□□□□□ -1.18
SKA1-204ENST00000488454 KHDC3LQ587J8 217 aa7.7□□□□□ -1.18
SKA1-204ENST00000488454 SPATA31B1PQ5VZV4 182 aa7.7□□□□□ -1.18
SKA1-204ENST00000488454 PAXXQ9BUH6 204 aa7.7□□□□□ -1.18
SKA1-204ENST00000488454 SLC25A2Q9BXI2 301 aa7.7□□□□□ -1.18
SKA1-204ENST00000488454 HRH4Q9H3N8 390 aa7.7□□□□□ -1.18
SKA1-204ENST00000488454 RPRMQ9NS64 109 aa7.7□□□□□ -1.18
SKA1-204ENST00000488454 AURKAIP1Q9NWT8 199 aaPredicted RBP7.7□□□□□ -1.18
SKA1-204ENST00000488454 TMEM14CQ9P0S9 112 aa7.7□□□□□ -1.18
SKA1-204ENST00000488454 SMAD5-AS1Q9Y6J3 95 aa7.7□□□□□ -1.18
SKA1-204ENST00000488454 PKD1L1Q8TDX9 2849 aa7.7□□□□□ -1.18
SKA1-204ENST00000488454 A0A087X0K7 114 aa7.69□□□□□ -1.18
SKA1-204ENST00000488454 PRB2P02812 416 aaPredicted RBP7.69□□□□□ -1.18
SKA1-204ENST00000488454 CD7P09564 240 aa7.69□□□□□ -1.18
SKA1-204ENST00000488454 HIST1H1EP10412 219 aaKnown RBP7.69□□□□□ -1.18
SKA1-204ENST00000488454 DEFB121Q5J5C9 76 aa7.69□□□□□ -1.18
SKA1-204ENST00000488454 PQLC2Q6ZP29 291 aa7.69□□□□□ -1.18
SKA1-204ENST00000488454 RPP25LQ8N5L8 163 aaKnown RBP7.69□□□□□ -1.18
SKA1-204ENST00000488454 DCANP1Q8TF63 244 aa7.69□□□□□ -1.18
SKA1-204ENST00000488454 TMED6Q8WW62 240 aa7.69□□□□□ -1.18
SKA1-204ENST00000488454 RAB24Q969Q5 203 aa7.69□□□□□ -1.18
SKA1-204ENST00000488454 LINC00052Q96N35 136 aa7.69□□□□□ -1.18
SKA1-204ENST00000488454 TUBA4BQ9H853 241 aa7.69□□□□□ -1.18
SKA1-204ENST00000488454 UBQLN2Q9UHD9 624 aa7.69□□□□□ -1.18
SKA1-204ENST00000488454 ISLRO14498 428 aa7.68□□□□□ -1.18
SKA1-204ENST00000488454 MRPS12O15235 138 aaKnown RBP7.68□□□□□ -1.18
SKA1-204ENST00000488454 HMGB3O15347 200 aaKnown RBP7.68□□□□□ -1.18
SKA1-204ENST00000488454 CXorf1O96002 111 aa7.68□□□□□ -1.18
SKA1-204ENST00000488454 SNRPCP09234 159 aaKnown RBP7.68□□□□□ -1.18
SKA1-204ENST00000488454 NBEAP1P0C6P0 100 aa7.68□□□□□ -1.18
SKA1-204ENST00000488454 ZNF688P0C7X2 276 aa7.68□□□□□ -1.18
SKA1-204ENST00000488454 PYYP10082 97 aa7.68□□□□□ -1.18
SKA1-204ENST00000488454 PSMB3P49720 205 aa7.68□□□□□ -1.18
SKA1-204ENST00000488454 RAB5CP51148 216 aa7.68□□□□□ -1.18
SKA1-204ENST00000488454 DEFB131AP59861 70 aa7.68□□□□□ -1.18
SKA1-204ENST00000488454 DEFA6Q01524 100 aa7.68□□□□□ -1.18
SKA1-204ENST00000488454 LCN15Q6UWW0 184 aa7.68□□□□□ -1.18
SKA1-204ENST00000488454 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.68□□□□□ -1.18
SKA1-204ENST00000488454 DPPA3Q6W0C5 159 aa7.68□□□□□ -1.18
SKA1-204ENST00000488454 BLNKQ8WV28 456 aa7.68□□□□□ -1.18
SKA1-204ENST00000488454 FAM167A-AS1Q96KT0 104 aa7.68□□□□□ -1.18
SKA1-204ENST00000488454 FAM110AQ9BQ89 295 aa7.68□□□□□ -1.18
SKA1-204ENST00000488454 CLEC5AQ9NY25 188 aa7.68□□□□□ -1.18
SKA1-204ENST00000488454 CTXND1A0A1B0GTU2 59 aa7.67□□□□□ -1.18
SKA1-204ENST00000488454 H3BQ15 152 aa7.67□□□□□ -1.18
SKA1-204ENST00000488454 H3BTX0 84 aa7.67□□□□□ -1.18
SKA1-204ENST00000488454 BOLA2-SMG1P6H3BVE0 249 aa7.67□□□□□ -1.18
SKA1-204ENST00000488454 OR10J4P0C629 311 aa7.67□□□□□ -1.18
SKA1-204ENST00000488454 IGLC2P0DOY2 106 aa7.67□□□□□ -1.18
SKA1-204ENST00000488454 UBE2L3P68036 154 aaKnown RBP7.67□□□□□ -1.18
SKA1-204ENST00000488454 PSG9Q00887 426 aa7.67□□□□□ -1.18
SKA1-204ENST00000488454 PSMG4Q5JS54 123 aa7.67□□□□□ -1.18
SKA1-204ENST00000488454 IQCF2Q8IXL9 164 aa7.67□□□□□ -1.18
SKA1-204ENST00000488454 Q8N1Y9 231 aa7.67□□□□□ -1.18
SKA1-204ENST00000488454 FAM24BQ8N5W8 94 aa7.67□□□□□ -1.18
SKA1-204ENST00000488454 DEFB125Q8N687 156 aa7.67□□□□□ -1.18
SKA1-204ENST00000488454 FAM213BQ8TBF2 198 aa7.67□□□□□ -1.18
SKA1-204ENST00000488454 PHYHIPLQ96FC7 376 aa7.67□□□□□ -1.18
SKA1-204ENST00000488454 C17orf77Q96MU5 243 aa7.67□□□□□ -1.18
SKA1-204ENST00000488454 SLC50A1Q9BRV3 221 aa7.67□□□□□ -1.18
SKA1-204ENST00000488454 MAP6D1Q9H9H5 199 aa7.67□□□□□ -1.18
SKA1-204ENST00000488454 ZNF586Q9NXT0 402 aa7.67□□□□□ -1.18
SKA1-204ENST00000488454 TRBV19A0A075B6N1 114 aa7.66□□□□□ -1.18
SKA1-204ENST00000488454 ZNF253O75346 499 aa7.66□□□□□ -1.18
SKA1-204ENST00000488454 EIF3GO75821 320 aaKnown RBP eCLIP7.66□□□□□ -1.18
SKA1-204ENST00000488454 STAG3L2P0CL84 134 aa7.66□□□□□ -1.18
SKA1-204ENST00000488454 STAG3L3P0CL85 134 aa7.66□□□□□ -1.18
SKA1-204ENST00000488454 PDE6HQ13956 83 aa7.66□□□□□ -1.18
SKA1-204ENST00000488454 APRG1Q8IVJ8 170 aa7.66□□□□□ -1.18
SKA1-204ENST00000488454 MRAPQ8TCY5 172 aa7.66□□□□□ -1.18
SKA1-204ENST00000488454 FXYD5Q96DB9 178 aa7.66□□□□□ -1.18
SKA1-204ENST00000488454 AAMDCQ9H7C9 122 aa7.66□□□□□ -1.18
SKA1-204ENST00000488454 ZNF331Q9NQX6 463 aaPredicted RBP7.66□□□□□ -1.18
SKA1-204ENST00000488454 TMEM167BQ9NRX6 74 aa7.66□□□□□ -1.18
SKA1-204ENST00000488454 SORL1Q92673 2214 aa7.66□□□□□ -1.18
SKA1-204ENST00000488454 TEX46H3BTG2 121 aa7.65□□□□□ -1.18
SKA1-204ENST00000488454 K7EIL1 84 aa7.65□□□□□ -1.18
SKA1-204ENST00000488454 SOCS3O14543 225 aa7.65□□□□□ -1.18
SKA1-204ENST00000488454 ARL14EPLP0DKL9 152 aa7.65□□□□□ -1.18
SKA1-204ENST00000488454 IGHV4-30-4P0DP06 118 aa7.65□□□□□ -1.18
SKA1-204ENST00000488454 GCHFRP30047 84 aa7.65□□□□□ -1.18
SKA1-204ENST00000488454 SULT1A2P50226 295 aa7.65□□□□□ -1.18
SKA1-204ENST00000488454 PSG3Q16557 428 aa7.65□□□□□ -1.18
SKA1-204ENST00000488454 ODF3L2Q3SX64 289 aa7.65□□□□□ -1.18
SKA1-204ENST00000488454 FAM74A1Q5RGS3 127 aa7.65□□□□□ -1.18
SKA1-204ENST00000488454 IGFL4Q6B9Z1 124 aa7.65□□□□□ -1.18
SKA1-204ENST00000488454 EBLN2Q6P2I7 272 aa7.65□□□□□ -1.18
SKA1-204ENST00000488454 STHQ8IWL8 128 aa7.65□□□□□ -1.18
SKA1-204ENST00000488454 ZNF738Q8NE65 137 aa7.65□□□□□ -1.18
SKA1-204ENST00000488454 SFT2D1Q8WV19 159 aa7.65□□□□□ -1.18
SKA1-204ENST00000488454 SAT2Q96F10 170 aaPredicted RBP7.65□□□□□ -1.18
SKA1-204ENST00000488454 SRD5A3Q9H8P0 318 aa7.65□□□□□ -1.18
SKA1-204ENST00000488454 TRAV8-2A0A0B4J237 113 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms