RNA–Protein interactions for RNA: ENST00000487747.5

SMC4-219, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-219ENST00000487747 C10orf99Q6UWK7 81 aa-0.03□□□□□ -2.41
SMC4-219ENST00000487747 C2orf82Q6UX34 121 aa-0.03□□□□□ -2.41
SMC4-219ENST00000487747 ALKAL2Q6UX46 152 aa-0.03□□□□□ -2.41
SMC4-219ENST00000487747 FAM151BQ6UXP7 276 aa-0.03□□□□□ -2.41
SMC4-219ENST00000487747 IZUMO2Q6UXV1 221 aa-0.03□□□□□ -2.41
SMC4-219ENST00000487747 FOXI2Q6ZQN5 318 aa-0.03□□□□□ -2.41
SMC4-219ENST00000487747 LCA10Q71F78 164 aa-0.03□□□□□ -2.41
SMC4-219ENST00000487747 RPS27LQ71UM5 84 aaKnown RBP-0.03□□□□□ -2.41
SMC4-219ENST00000487747 COMMD6Q7Z4G1 85 aa-0.03□□□□□ -2.41
SMC4-219ENST00000487747 TMED4Q7Z7H5 227 aa-0.03□□□□□ -2.41
SMC4-219ENST00000487747 Q86TA4 180 aa-0.03□□□□□ -2.41
SMC4-219ENST00000487747 GKN2Q86XP6 184 aa-0.03□□□□□ -2.41
SMC4-219ENST00000487747 NDUFA11Q86Y39 141 aa-0.03□□□□□ -2.41
SMC4-219ENST00000487747 BPIFA4PQ86YQ2 179 aa-0.03□□□□□ -2.41
SMC4-219ENST00000487747 CLVS1Q8IUQ0 354 aaPredicted RBP-0.03□□□□□ -2.41
SMC4-219ENST00000487747 PDZD9Q8IXQ8 264 aa-0.03□□□□□ -2.41
SMC4-219ENST00000487747 C9orf62Q8N4C0 152 aa-0.03□□□□□ -2.41
SMC4-219ENST00000487747 MMGT1Q8N4V1 131 aa-0.03□□□□□ -2.41
SMC4-219ENST00000487747 C12orf45Q8N5I9 185 aaPredicted RBP-0.03□□□□□ -2.41
SMC4-219ENST00000487747 TTC9CQ8N5M4 171 aa-0.03□□□□□ -2.41
SMC4-219ENST00000487747 TMEM86BQ8N661 226 aa-0.03□□□□□ -2.41
SMC4-219ENST00000487747 DEFB123Q8N688 67 aa-0.03□□□□□ -2.41
SMC4-219ENST00000487747 SIGLECL1Q8N7X8 197 aa-0.03□□□□□ -2.41
SMC4-219ENST00000487747 TMEM229BQ8NBD8 167 aa-0.03□□□□□ -2.41
SMC4-219ENST00000487747 ST6GALNAC3Q8NDV1 305 aa-0.03□□□□□ -2.41
SMC4-219ENST00000487747 NUP35Q8NFH5 326 aa-0.03□□□□□ -2.41
SMC4-219ENST00000487747 OR8J3Q8NGG0 315 aa-0.03□□□□□ -2.41
SMC4-219ENST00000487747 OR8J2Q8NGG1 315 aa-0.03□□□□□ -2.41
SMC4-219ENST00000487747 OR52L1Q8NGH7 329 aa-0.03□□□□□ -2.41
SMC4-219ENST00000487747 OR4K15Q8NH41 348 aa-0.03□□□□□ -2.41
SMC4-219ENST00000487747 GRPEL2Q8TAA5 225 aa-0.03□□□□□ -2.41
SMC4-219ENST00000487747 SLC25A40Q8TBP6 338 aa-0.03□□□□□ -2.41
SMC4-219ENST00000487747 H1FXQ92522 213 aaKnown RBP-0.03□□□□□ -2.41
SMC4-219ENST00000487747 BORCS5Q969J3 196 aa-0.03□□□□□ -2.41
SMC4-219ENST00000487747 OPTNQ96CV9 577 aa-0.03□□□□□ -2.41
SMC4-219ENST00000487747 MALSU1Q96EH3 234 aa-0.03□□□□□ -2.41
SMC4-219ENST00000487747 IMP4Q96G21 291 aaKnown RBP-0.03□□□□□ -2.41
SMC4-219ENST00000487747 FAM167A-AS1Q96KT0 104 aa-0.03□□□□□ -2.41
SMC4-219ENST00000487747 Q96NJ1 140 aa-0.03□□□□□ -2.41
SMC4-219ENST00000487747 CCDC115Q96NT0 180 aa-0.03□□□□□ -2.41
SMC4-219ENST00000487747 OR52E6Q96RD3 313 aa-0.03□□□□□ -2.41
SMC4-219ENST00000487747 SPRR2FQ96RM1 72 aa-0.03□□□□□ -2.41
SMC4-219ENST00000487747 GPX7Q96SL4 187 aaPredicted RBP-0.03□□□□□ -2.41
SMC4-219ENST00000487747 CGREF1Q99674 301 aa-0.03□□□□□ -2.41
SMC4-219ENST00000487747 PRRT1Q99946 306 aa-0.03□□□□□ -2.41
SMC4-219ENST00000487747 LINC00467Q9BRT7 94 aa-0.03□□□□□ -2.41
SMC4-219ENST00000487747 TMEM147Q9BVK8 224 aa-0.03□□□□□ -2.41
SMC4-219ENST00000487747 C20orf27Q9GZN8 174 aa-0.03□□□□□ -2.41
SMC4-219ENST00000487747 CYP4F30PQ9H0H9 118 aa-0.03□□□□□ -2.41
SMC4-219ENST00000487747 AGPAT4-IT1Q9H0P7 198 aa-0.03□□□□□ -2.41
SMC4-219ENST00000487747 TLNRD1Q9H1K6 362 aa-0.03□□□□□ -2.41
SMC4-219ENST00000487747 OR51V1Q9H2C8 321 aa-0.03□□□□□ -2.41
SMC4-219ENST00000487747 BOLA2Q9H3K6 86 aa-0.03□□□□□ -2.41
SMC4-219ENST00000487747 LINC00472Q9H8W2 130 aa-0.03□□□□□ -2.41
SMC4-219ENST00000487747 PSTPIP2Q9H939 334 aa-0.03□□□□□ -2.41
SMC4-219ENST00000487747 UCK1Q9HA47 277 aa-0.03□□□□□ -2.41
SMC4-219ENST00000487747 PARVBQ9HBI1 364 aa-0.03□□□□□ -2.41
SMC4-219ENST00000487747 PROK2Q9HC23 129 aa-0.03□□□□□ -2.41
SMC4-219ENST00000487747 CDC42SE1Q9NRR8 79 aa-0.03□□□□□ -2.41
SMC4-219ENST00000487747 ARMC1Q9NVT9 282 aa-0.03□□□□□ -2.41
SMC4-219ENST00000487747 TMEM242Q9NWH2 141 aa-0.03□□□□□ -2.41
SMC4-219ENST00000487747 FBXL12Q9NXK8 326 aa-0.03□□□□□ -2.41
SMC4-219ENST00000487747 RASL12Q9NYN1 266 aa-0.03□□□□□ -2.41
SMC4-219ENST00000487747 MRPL27Q9P0M9 148 aaKnown RBP-0.03□□□□□ -2.41
SMC4-219ENST00000487747 KAAG1Q9UBP8 84 aa-0.03□□□□□ -2.41
SMC4-219ENST00000487747 CYSLTR1Q9Y271 337 aa-0.03□□□□□ -2.41
SMC4-219ENST00000487747 LSM2Q9Y333 95 aaKnown RBP-0.03□□□□□ -2.41
SMC4-219ENST00000487747 RNF11Q9Y3C5 154 aa-0.03□□□□□ -2.41
SMC4-219ENST00000487747 Q9Y3F1 56 aa-0.03□□□□□ -2.41
SMC4-219ENST00000487747 U3KQA8 63 aa-0.03□□□□□ -2.41
SMC4-219ENST00000487747 TNXBP22105 4242 aa-0.03□□□□□ -2.41
SMC4-219ENST00000487747 ZNF831Q5JPB2 1677 aa-0.03□□□□□ -2.41
SMC4-219ENST00000487747 NHSQ6T4R5 1651 aa-0.03□□□□□ -2.41
SMC4-219ENST00000487747 RIMS1Q86UR5 1692 aaKnown RBP-0.03□□□□□ -2.41
SMC4-219ENST00000487747 ROBO1Q9Y6N7 1651 aa-0.03□□□□□ -2.41
SMC4-219ENST00000487747 LRP1BQ9NZR2 4599 aa-0.03□□□□□ -2.41
SMC4-219ENST00000487747 TMEM131LA2VDJ0 1609 aa-0.03□□□□□ -2.41
SMC4-219ENST00000487747 KIAA0556O60303 1618 aa-0.03□□□□□ -2.41
SMC4-219ENST00000487747 LRP6O75581 1613 aa-0.03□□□□□ -2.41
SMC4-219ENST00000487747 TOP2BQ02880 1626 aa-0.03□□□□□ -2.41
SMC4-219ENST00000487747 SHROOM2Q13796 1616 aa-0.03□□□□□ -2.41
SMC4-219ENST00000487747 SCRIBQ14160 1630 aa-0.03□□□□□ -2.41
SMC4-219ENST00000487747 MADDQ8WXG6 1647 aa-0.03□□□□□ -2.41
SMC4-219ENST00000487747 CITO14578 2027 aa-0.03□□□□□ -2.41
SMC4-219ENST00000487747 SCN10AQ9Y5Y9 1956 aa-0.03□□□□□ -2.41
SMC4-219ENST00000487747 ABCA8O94911 1581 aa-0.03□□□□□ -2.41
SMC4-219ENST00000487747 PCF11O94913 1555 aaKnown RBP-0.03□□□□□ -2.41
SMC4-219ENST00000487747 NWD1Q149M9 1564 aa-0.03□□□□□ -2.41
SMC4-219ENST00000487747 TTC37Q6PGP7 1564 aa-0.03□□□□□ -2.41
SMC4-219ENST00000487747 DNMBPQ6XZF7 1577 aa-0.03□□□□□ -2.41
SMC4-219ENST00000487747 SAMD9LQ8IVG5 1584 aa-0.03□□□□□ -2.41
SMC4-219ENST00000487747 BAZ1AQ9NRL2 1556 aaPredicted RBP-0.03□□□□□ -2.41
SMC4-219ENST00000487747 MUC12Q9UKN1 5478 aa-0.03□□□□□ -2.41
SMC4-219ENST00000487747 ABCC2Q92887 1545 aa-0.03□□□□□ -2.41
SMC4-219ENST00000487747 ZNF106Q9H2Y7 1883 aaKnown RBP-0.03□□□□□ -2.41
SMC4-219ENST00000487747 TNCP24821 2201 aa-0.03□□□□□ -2.41
SMC4-219ENST00000487747 CCDC18Q5T9S5 1454 aa-0.03□□□□□ -2.41
SMC4-219ENST00000487747 LRRC9Q6ZRR7 1453 aa-0.03□□□□□ -2.41
SMC4-219ENST00000487747 CEP152O94986 1710 aa-0.04□□□□□ -2.42
SMC4-219ENST00000487747 COL24A1Q17RW2 1714 aa-0.04□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 161.1 ms