RNA–Protein interactions for RNA: ENST00000487354.1

MCF2L-228, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 553 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-228ENST00000487354 ERVFC1-1P60608 527 aa10.46□□□□□ -0.73
MCF2L-228ENST00000487354 Q6ZTI0 123 aa10.46□□□□□ -0.73
MCF2L-228ENST00000487354 ACOT7LQ6ZUV0 252 aa10.46□□□□□ -0.73
MCF2L-228ENST00000487354 AP3S1Q92572 193 aa10.46□□□□□ -0.73
MCF2L-228ENST00000487354 C20orf144Q9BQM9 153 aa10.46□□□□□ -0.73
MCF2L-228ENST00000487354 VCX3AQ9NNX9 186 aa10.46□□□□□ -0.73
MCF2L-228ENST00000487354 KCNIP3Q9Y2W7 256 aa10.46□□□□□ -0.73
MCF2L-228ENST00000487354 A0A087WTM6 91 aa10.45□□□□□ -0.74
MCF2L-228ENST00000487354 RPL7P18124 248 aaKnown RBP10.45□□□□□ -0.74
MCF2L-228ENST00000487354 PLP1P60201 277 aa10.45□□□□□ -0.74
MCF2L-228ENST00000487354 HAMPP81172 84 aa10.45□□□□□ -0.74
MCF2L-228ENST00000487354 MRPS10P82664 201 aaKnown RBP10.45□□□□□ -0.74
MCF2L-228ENST00000487354 CLVS1Q8IUQ0 354 aaPredicted RBP10.45□□□□□ -0.74
MCF2L-228ENST00000487354 RPUSD4Q96CM3 377 aaKnown RBP10.45□□□□□ -0.74
MCF2L-228ENST00000487354 PAIP2BQ9ULR5 123 aaKnown RBP10.45□□□□□ -0.74
MCF2L-228ENST00000487354 ANKRD20A5PA0PJZ0 165 aa10.44□□□□□ -0.74
MCF2L-228ENST00000487354 PRAC2D3DTV9 90 aa10.44□□□□□ -0.74
MCF2L-228ENST00000487354 SIVA1O15304 175 aa10.44□□□□□ -0.74
MCF2L-228ENST00000487354 RLN2P04090 185 aa10.44□□□□□ -0.74
MCF2L-228ENST00000487354 ICAM4Q14773 271 aa10.44□□□□□ -0.74
MCF2L-228ENST00000487354 PATE2Q6UY27 113 aa10.44□□□□□ -0.74
MCF2L-228ENST00000487354 CYP2G1PQ6ZSU1 146 aa10.44□□□□□ -0.74
MCF2L-228ENST00000487354 ZBTB8BQ8NAP8 495 aaPredicted RBP10.44□□□□□ -0.74
MCF2L-228ENST00000487354 PTTG2Q9NZH5 202 aa10.44□□□□□ -0.74
MCF2L-228ENST00000487354 HIGD1AQ9Y241 93 aa10.44□□□□□ -0.74
MCF2L-228ENST00000487354 CTDSP2O14595 271 aa10.43□□□□□ -0.74
MCF2L-228ENST00000487354 CTDSPLO15194 276 aa10.43□□□□□ -0.74
MCF2L-228ENST00000487354 ADAP1O75689 374 aa10.43□□□□□ -0.74
MCF2L-228ENST00000487354 SLC25A6P12236 298 aa10.43□□□□□ -0.74
MCF2L-228ENST00000487354 SRPXP78539 464 aa10.43□□□□□ -0.74
MCF2L-228ENST00000487354 AKR1C1Q04828 323 aa10.43□□□□□ -0.74
MCF2L-228ENST00000487354 ZNF331Q9NQX6 463 aaPredicted RBP10.43□□□□□ -0.74
MCF2L-228ENST00000487354 PPP1R14DQ9NXH3 145 aa10.43□□□□□ -0.74
MCF2L-228ENST00000487354 LINC00854A0A1B0GVQ3 168 aa10.42□□□□□ -0.74
MCF2L-228ENST00000487354 DUXBA0A1W2PPF3 345 aa10.42□□□□□ -0.74
MCF2L-228ENST00000487354 PMS2P5A8MQ11 134 aa10.42□□□□□ -0.74
MCF2L-228ENST00000487354 H3BP45 60 aa10.42□□□□□ -0.74
MCF2L-228ENST00000487354 NXPH4O95158 308 aa10.42□□□□□ -0.74
MCF2L-228ENST00000487354 DAZ2Q13117 558 aaKnown RBP10.42□□□□□ -0.74
MCF2L-228ENST00000487354 LRTM2Q8N967 370 aa10.42□□□□□ -0.74
MCF2L-228ENST00000487354 C11orf72Q8NBR9 251 aa10.42□□□□□ -0.74
MCF2L-228ENST00000487354 LRP1Q07954 4544 aaKnown RBP10.42□□□□□ -0.74
MCF2L-228ENST00000487354 SNURFLB1AK76 121 aa10.41□□□□□ -0.74
MCF2L-228ENST00000487354 WRBO00258 174 aa10.41□□□□□ -0.74
MCF2L-228ENST00000487354 SLC17A3O00476 420 aa10.41□□□□□ -0.74
MCF2L-228ENST00000487354 SYNGR2O43760 224 aa10.41□□□□□ -0.74
MCF2L-228ENST00000487354 HYPMO75409 117 aa10.41□□□□□ -0.74
MCF2L-228ENST00000487354 SNRPCP09234 159 aaKnown RBP10.41□□□□□ -0.74
MCF2L-228ENST00000487354 LINC00869P0C866 280 aa10.41□□□□□ -0.74
MCF2L-228ENST00000487354 TMED4Q7Z7H5 227 aa10.41□□□□□ -0.74
MCF2L-228ENST00000487354 CIB3Q96Q77 187 aaPredicted RBP10.41□□□□□ -0.74
MCF2L-228ENST00000487354 EREGO14944 169 aa10.4□□□□□ -0.74
MCF2L-228ENST00000487354 IL5P05113 134 aa10.4□□□□□ -0.74
MCF2L-228ENST00000487354 ANXA3P12429 323 aa10.4□□□□□ -0.74
MCF2L-228ENST00000487354 CXCL2P19875 107 aa10.4□□□□□ -0.74
MCF2L-228ENST00000487354 S100A7P31151 101 aa10.4□□□□□ -0.74
MCF2L-228ENST00000487354 RAP2BP61225 183 aa10.4□□□□□ -0.74
MCF2L-228ENST00000487354 SPANXN5Q5MJ07 72 aa10.4□□□□□ -0.74
MCF2L-228ENST00000487354 Q6ZSN1 163 aa10.4□□□□□ -0.74
MCF2L-228ENST00000487354 SCP2D1Q9UJQ7 156 aa10.4□□□□□ -0.74
MCF2L-228ENST00000487354 MED6O75586 246 aa10.39□□□□□ -0.75
MCF2L-228ENST00000487354 CCNKO75909 580 aa10.39□□□□□ -0.75
MCF2L-228ENST00000487354 OR5G3P0C626 314 aa10.39□□□□□ -0.75
MCF2L-228ENST00000487354 CT45A10P0DMU9 189 aa10.39□□□□□ -0.75
MCF2L-228ENST00000487354 CCDC28AQ8IWP9 274 aa10.39□□□□□ -0.75
MCF2L-228ENST00000487354 SCGB3A2Q96PL1 93 aa10.39□□□□□ -0.75
MCF2L-228ENST00000487354 TRAV12-3A0A0B4J271 114 aa10.38□□□□□ -0.75
MCF2L-228ENST00000487354 K7EPK0 472 aa10.38□□□□□ -0.75
MCF2L-228ENST00000487354 RGS5O15539 181 aa10.38□□□□□ -0.75
MCF2L-228ENST00000487354 IFNA5P01569 189 aa10.38□□□□□ -0.75
MCF2L-228ENST00000487354 GCSHP23434 173 aa10.38□□□□□ -0.75
MCF2L-228ENST00000487354 IL18Q14116 193 aa10.38□□□□□ -0.75
MCF2L-228ENST00000487354 MORN5Q5VZ52 161 aa10.38□□□□□ -0.75
MCF2L-228ENST00000487354 TEPPQ6URK8 271 aa10.38□□□□□ -0.75
MCF2L-228ENST00000487354 LCN15Q6UWW0 184 aa10.38□□□□□ -0.75
MCF2L-228ENST00000487354 ZNF431Q8TF32 576 aaPredicted RBP10.38□□□□□ -0.75
MCF2L-228ENST00000487354 SLC50A1Q9BRV3 221 aa10.38□□□□□ -0.75
MCF2L-228ENST00000487354 GSN-AS1Q9NRJ2 163 aa10.38□□□□□ -0.75
MCF2L-228ENST00000487354 MCUBQ9NWR8 336 aa10.38□□□□□ -0.75
MCF2L-228ENST00000487354 RABL2BQ9UNT1 228 aa10.38□□□□□ -0.75
MCF2L-228ENST00000487354 SMCO3A2RU48 225 aa10.37□□□□□ -0.75
MCF2L-228ENST00000487354 H3BTX0 84 aa10.37□□□□□ -0.75
MCF2L-228ENST00000487354 J3KRW8 73 aa10.37□□□□□ -0.75
MCF2L-228ENST00000487354 SMIM18P0DKX4 95 aa10.37□□□□□ -0.75
MCF2L-228ENST00000487354 RPP30P78346 268 aaKnown RBP10.37□□□□□ -0.75
MCF2L-228ENST00000487354 SPCS2Q15005 226 aa10.37□□□□□ -0.75
MCF2L-228ENST00000487354 TMEM128Q5BJH2 165 aa10.37□□□□□ -0.75
MCF2L-228ENST00000487354 CCDC190Q86UF4 302 aa10.37□□□□□ -0.75
MCF2L-228ENST00000487354 LRRC20Q8TCA0 184 aa10.37□□□□□ -0.75
MCF2L-228ENST00000487354 ODF3Q96PU9 254 aa10.37□□□□□ -0.75
MCF2L-228ENST00000487354 PYGO2Q9BRQ0 406 aa10.37□□□□□ -0.75
MCF2L-228ENST00000487354 LINC00467Q9BRT7 94 aa10.37□□□□□ -0.75
MCF2L-228ENST00000487354 ARL6Q9H0F7 186 aa10.37□□□□□ -0.75
MCF2L-228ENST00000487354 ARV1Q9H2C2 271 aa10.37□□□□□ -0.75
MCF2L-228ENST00000487354 STRAPQ9Y3F4 350 aaKnown RBP10.37□□□□□ -0.75
MCF2L-228ENST00000487354 FAT3Q8TDW7 4589 aa10.36□□□□□ -0.75
MCF2L-228ENST00000487354 NPIPB6E9PJ23 425 aa10.36□□□□□ -0.75
MCF2L-228ENST00000487354 J3QL48 77 aa10.36□□□□□ -0.75
MCF2L-228ENST00000487354 ZNF324O75467 553 aaPredicted RBP10.36□□□□□ -0.75
MCF2L-228ENST00000487354 IGLC2P0DOY2 106 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms