RNA–Protein interactions for RNA: ENST00000487241.1

TRIM5-210, Transcript of tripartite motif containing 5, humanhuman

TSL 1 (best)

Gene TRIM5, Length 756 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM5-210ENST00000487241 PMS2P11Q13670 270 aa5.87□□□□□ -1.47
TRIM5-210ENST00000487241 ZNF124Q15973 351 aa5.87□□□□□ -1.47
TRIM5-210ENST00000487241 BSXQ3C1V8 233 aa5.87□□□□□ -1.47
TRIM5-210ENST00000487241 KHDC3LQ587J8 217 aa5.87□□□□□ -1.47
TRIM5-210ENST00000487241 TMEM88Q6PEY1 159 aa5.87□□□□□ -1.47
TRIM5-210ENST00000487241 STPG3Q8N7X2 389 aa5.87□□□□□ -1.47
TRIM5-210ENST00000487241 RXFP4Q8TDU9 374 aa5.87□□□□□ -1.47
TRIM5-210ENST00000487241 MGST2Q99735 147 aa5.87□□□□□ -1.47
TRIM5-210ENST00000487241 SPAG8Q99932 426 aaPredicted RBP5.87□□□□□ -1.47
TRIM5-210ENST00000487241 GGTLC1Q9BX51 225 aa5.87□□□□□ -1.47
TRIM5-210ENST00000487241 MAP1LC3BQ9GZQ8 125 aa5.87□□□□□ -1.47
TRIM5-210ENST00000487241 SLC25A22Q9H936 323 aa5.87□□□□□ -1.47
TRIM5-210ENST00000487241 ENY2Q9NPA8 101 aa5.87□□□□□ -1.47
TRIM5-210ENST00000487241 GNG13Q9P2W3 67 aa5.87□□□□□ -1.47
TRIM5-210ENST00000487241 LOC105371267A0A1B0GV96 52 aa5.86□□□□□ -1.47
TRIM5-210ENST00000487241 SMCO3A2RU48 225 aa5.86□□□□□ -1.47
TRIM5-210ENST00000487241 NPIPB6E9PJ23 425 aa5.86□□□□□ -1.47
TRIM5-210ENST00000487241 FNDC10F2Z333 226 aa5.86□□□□□ -1.47
TRIM5-210ENST00000487241 C17orf112F2Z3M2 114 aa5.86□□□□□ -1.47
TRIM5-210ENST00000487241 INS-IGF2F8WCM5 200 aa5.86□□□□□ -1.47
TRIM5-210ENST00000487241 K7EMT4 169 aa5.86□□□□□ -1.47
TRIM5-210ENST00000487241 ZNF207O43670 478 aaKnown RBP5.86□□□□□ -1.47
TRIM5-210ENST00000487241 MPDU1O75352 247 aa5.86□□□□□ -1.47
TRIM5-210ENST00000487241 YIF1AO95070 293 aa5.86□□□□□ -1.47
TRIM5-210ENST00000487241 IFNA4P05014 189 aa5.86□□□□□ -1.47
TRIM5-210ENST00000487241 CTSGP08311 255 aa5.86□□□□□ -1.47
TRIM5-210ENST00000487241 RNASE2P10153 161 aaKnown RBP5.86□□□□□ -1.47
TRIM5-210ENST00000487241 BCL2P10415 239 aa5.86□□□□□ -1.47
TRIM5-210ENST00000487241 MFAP4P55083 255 aa5.86□□□□□ -1.47
TRIM5-210ENST00000487241 LINC00310P59036 64 aa5.86□□□□□ -1.47
TRIM5-210ENST00000487241 ERHP84090 104 aaKnown RBP5.86□□□□□ -1.47
TRIM5-210ENST00000487241 RELQ04864 619 aaPredicted RBP5.86□□□□□ -1.47
TRIM5-210ENST00000487241 C2orf83Q53S99 150 aa5.86□□□□□ -1.47
TRIM5-210ENST00000487241 FAM122CQ6P4D5 195 aa5.86□□□□□ -1.47
TRIM5-210ENST00000487241 CYB561D1Q8N8Q1 229 aa5.86□□□□□ -1.47
TRIM5-210ENST00000487241 ZNF709Q8N972 641 aa5.86□□□□□ -1.47
TRIM5-210ENST00000487241 ZNF114Q8NC26 417 aa5.86□□□□□ -1.47
TRIM5-210ENST00000487241 OR10G4Q8NGN3 311 aa5.86□□□□□ -1.47
TRIM5-210ENST00000487241 OR10G9Q8NGN4 311 aa5.86□□□□□ -1.47
TRIM5-210ENST00000487241 OR10G7Q8NGN6 311 aa5.86□□□□□ -1.47
TRIM5-210ENST00000487241 TXN2Q99757 166 aa5.86□□□□□ -1.47
TRIM5-210ENST00000487241 SLC39A9Q9NUM3 307 aa5.86□□□□□ -1.47
TRIM5-210ENST00000487241 OR4C46A6NHA9 309 aa5.85□□□□□ -1.47
TRIM5-210ENST00000487241 ZFP92A6NM28 416 aa5.85□□□□□ -1.47
TRIM5-210ENST00000487241 I3L2K1 104 aa5.85□□□□□ -1.47
TRIM5-210ENST00000487241 HMGB3O15347 200 aaKnown RBP5.85□□□□□ -1.47
TRIM5-210ENST00000487241 GNG7O60262 68 aa5.85□□□□□ -1.47
TRIM5-210ENST00000487241 LY6G6CO95867 125 aa5.85□□□□□ -1.47
TRIM5-210ENST00000487241 MT-CO2P00403 227 aa5.85□□□□□ -1.47
TRIM5-210ENST00000487241 IGHV3-48P01763 117 aa5.85□□□□□ -1.47
TRIM5-210ENST00000487241 FCGR2BP31994 310 aaPredicted RBP5.85□□□□□ -1.47
TRIM5-210ENST00000487241 OPRK1P41145 380 aa5.85□□□□□ -1.47
TRIM5-210ENST00000487241 ACOT6Q3I5F7 207 aaPredicted RBP5.85□□□□□ -1.47
TRIM5-210ENST00000487241 GCSAMLQ5JQS6 135 aa5.85□□□□□ -1.47
TRIM5-210ENST00000487241 SOHLH1Q5JUK2 328 aa5.85□□□□□ -1.47
TRIM5-210ENST00000487241 MIC13Q5XKP0 118 aa5.85□□□□□ -1.47
TRIM5-210ENST00000487241 FAM90A2PQ658T7 463 aa5.85□□□□□ -1.47
TRIM5-210ENST00000487241 RAB24Q969Q5 203 aa5.85□□□□□ -1.47
TRIM5-210ENST00000487241 ACTR3CQ9C0K3 210 aaPredicted RBP5.85□□□□□ -1.47
TRIM5-210ENST00000487241 TMPRSS5Q9H3S3 457 aa5.85□□□□□ -1.47
TRIM5-210ENST00000487241 NPVFQ9HCQ7 196 aa5.85□□□□□ -1.47
TRIM5-210ENST00000487241 PXMP4Q9Y6I8 212 aa5.85□□□□□ -1.47
TRIM5-210ENST00000487241 IGHV7-4-1A0A0J9YVY3 117 aa5.84□□□□□ -1.47
TRIM5-210ENST00000487241 C7orf77A4D0Y5 90 aa5.84□□□□□ -1.47
TRIM5-210ENST00000487241 CXorf65A6NEN9 183 aa5.84□□□□□ -1.47
TRIM5-210ENST00000487241 IFNA1P01562 189 aa5.84□□□□□ -1.47
TRIM5-210ENST00000487241 AKR1C3P42330 323 aa5.84□□□□□ -1.47
TRIM5-210ENST00000487241 CDC34P49427 236 aaPredicted RBP5.84□□□□□ -1.47
TRIM5-210ENST00000487241 SUB1P53999 127 aaKnown RBP eCLIP5.84□□□□□ -1.47
TRIM5-210ENST00000487241 APOC4P55056 127 aa5.84□□□□□ -1.47
TRIM5-210ENST00000487241 ATP5IP56385 69 aaPredicted RBP5.84□□□□□ -1.47
TRIM5-210ENST00000487241 RHEBQ15382 184 aa5.84□□□□□ -1.47
TRIM5-210ENST00000487241 TMEM116Q8NCL8 245 aa5.84□□□□□ -1.47
TRIM5-210ENST00000487241 GATAD1Q8WUU5 269 aa5.84□□□□□ -1.47
TRIM5-210ENST00000487241 RNF2Q99496 336 aa5.84□□□□□ -1.47
TRIM5-210ENST00000487241 RHPN1-AS1Q9BWJ2 59 aa5.84□□□□□ -1.47
TRIM5-210ENST00000487241 SMPXQ9UHP9 88 aa5.84□□□□□ -1.47
TRIM5-210ENST00000487241 VAX2Q9UIW0 290 aa5.84□□□□□ -1.47
TRIM5-210ENST00000487241 STARD9Q9P2P6 4700 aa5.83□□□□□ -1.48
TRIM5-210ENST00000487241 IGKV3-7A0A075B6H7 116 aa5.83□□□□□ -1.48
TRIM5-210ENST00000487241 IGKV1OR2-108A0A075B7D4 117 aa5.83□□□□□ -1.48
TRIM5-210ENST00000487241 IGHV3-49A0A0A0MS15 119 aa5.83□□□□□ -1.48
TRIM5-210ENST00000487241 COLCA2A8K830 154 aa5.83□□□□□ -1.48
TRIM5-210ENST00000487241 H3BQ15 152 aa5.83□□□□□ -1.48
TRIM5-210ENST00000487241 M0R036 132 aa5.83□□□□□ -1.48
TRIM5-210ENST00000487241 CORTO00230 105 aa5.83□□□□□ -1.48
TRIM5-210ENST00000487241 CHEK1O14757 476 aa5.83□□□□□ -1.48
TRIM5-210ENST00000487241 NDUFS6O75380 124 aaKnown RBP5.83□□□□□ -1.48
TRIM5-210ENST00000487241 LINC00869P0C866 280 aa5.83□□□□□ -1.48
TRIM5-210ENST00000487241 BMI1P35226 326 aa5.83□□□□□ -1.48
TRIM5-210ENST00000487241 RPL29P47914 159 aaKnown RBP5.83□□□□□ -1.48
TRIM5-210ENST00000487241 TFPI2P48307 235 aa5.83□□□□□ -1.48
TRIM5-210ENST00000487241 CEBPGP53567 150 aa5.83□□□□□ -1.48
TRIM5-210ENST00000487241 B2MP61769 119 aa5.83□□□□□ -1.48
TRIM5-210ENST00000487241 GAMTQ14353 236 aa5.83□□□□□ -1.48
TRIM5-210ENST00000487241 ODF3L2Q3SX64 289 aa5.83□□□□□ -1.48
TRIM5-210ENST00000487241 PVRIGQ6DKI7 326 aa5.83□□□□□ -1.48
TRIM5-210ENST00000487241 TMEM144Q7Z5S9 345 aa5.83□□□□□ -1.48
TRIM5-210ENST00000487241 OVOL2Q9BRP0 275 aa5.83□□□□□ -1.48
TRIM5-210ENST00000487241 RPS10P5Q9NQ39 176 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms