RNA–Protein interactions for RNA: ENST00000487194.1

VAMP3-203, Transcript of vesicle associated membrane protein 3, humanhuman

TSL 4

Gene VAMP3, Length 274 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-203ENST00000487194 EPDR1Q9UM22 224 aa4.74□□□□□ -1.65
VAMP3-203ENST00000487194 UFC1Q9Y3C8 167 aa4.74□□□□□ -1.65
VAMP3-203ENST00000487194 U3KQE9 123 aa4.74□□□□□ -1.65
VAMP3-203ENST00000487194 SERTM2A0A1B0GWG4 89 aa4.73□□□□□ -1.65
VAMP3-203ENST00000487194 ZNF320A2RRD8 509 aa4.73□□□□□ -1.65
VAMP3-203ENST00000487194 CXorf65A6NEN9 183 aa4.73□□□□□ -1.65
VAMP3-203ENST00000487194 ZNF785A8K8V0 405 aa4.73□□□□□ -1.65
VAMP3-203ENST00000487194 K7EQM0 130 aa4.73□□□□□ -1.65
VAMP3-203ENST00000487194 DNASE2O00115 360 aaPredicted RBP4.73□□□□□ -1.65
VAMP3-203ENST00000487194 TSPAN4O14817 238 aa4.73□□□□□ -1.65
VAMP3-203ENST00000487194 NDUFA7O95182 113 aa4.73□□□□□ -1.65
VAMP3-203ENST00000487194 TRBV12-3P01733 135 aa4.73□□□□□ -1.65
VAMP3-203ENST00000487194 CSN1S1P47710 185 aa4.73□□□□□ -1.65
VAMP3-203ENST00000487194 CDX1P47902 265 aaPredicted RBP4.73□□□□□ -1.65
VAMP3-203ENST00000487194 GNG4P50150 75 aa4.73□□□□□ -1.65
VAMP3-203ENST00000487194 UBE2G1P62253 170 aa4.73□□□□□ -1.65
VAMP3-203ENST00000487194 C16orf54Q6UWD8 224 aa4.73□□□□□ -1.65
VAMP3-203ENST00000487194 LINC01551Q86U37 167 aa4.73□□□□□ -1.65
VAMP3-203ENST00000487194 ANAPC16Q96DE5 110 aa4.73□□□□□ -1.65
VAMP3-203ENST00000487194 SMIM12Q96EX1 92 aa4.73□□□□□ -1.65
VAMP3-203ENST00000487194 OR5B12Q96R08 314 aa4.73□□□□□ -1.65
VAMP3-203ENST00000487194 SLC50A1Q9BRV3 221 aa4.73□□□□□ -1.65
VAMP3-203ENST00000487194 DERL1Q9BUN8 251 aa4.73□□□□□ -1.65
VAMP3-203ENST00000487194 DAZ1Q9NQZ3 744 aaKnown RBP4.73□□□□□ -1.65
VAMP3-203ENST00000487194 CLEC5AQ9NY25 188 aa4.73□□□□□ -1.65
VAMP3-203ENST00000487194 KLF12Q9Y4X4 402 aa4.73□□□□□ -1.65
VAMP3-203ENST00000487194 F8P00451 2351 aa4.73□□□□□ -1.65
VAMP3-203ENST00000487194 NIPBLQ6KC79 2804 aaeCLIP4.73□□□□□ -1.65
VAMP3-203ENST00000487194 OTOGQ6ZRI0 2925 aa4.72□□□□□ -1.65
VAMP3-203ENST00000487194 IGHV3OR16-8A0A075B7F1 116 aa4.72□□□□□ -1.65
VAMP3-203ENST00000487194 IGHV7-4-1A0A0J9YVY3 117 aa4.72□□□□□ -1.65
VAMP3-203ENST00000487194 TRBV6-1A0A0K0K1D8 114 aa4.72□□□□□ -1.65
VAMP3-203ENST00000487194 FBLL1A6NHQ2 334 aaKnown RBP4.72□□□□□ -1.65
VAMP3-203ENST00000487194 H3BTX0 84 aa4.72□□□□□ -1.65
VAMP3-203ENST00000487194 LGALS9O00182 355 aa4.72□□□□□ -1.65
VAMP3-203ENST00000487194 PPP1R2P9O14990 202 aa4.72□□□□□ -1.65
VAMP3-203ENST00000487194 TCRAP04437 139 aa4.72□□□□□ -1.65
VAMP3-203ENST00000487194 SNRPCP09234 159 aaKnown RBP4.72□□□□□ -1.65
VAMP3-203ENST00000487194 TMEM183BQ1AE95 376 aa4.72□□□□□ -1.65
VAMP3-203ENST00000487194 CENPWQ5EE01 88 aa4.72□□□□□ -1.65
VAMP3-203ENST00000487194 SAMD13Q5VXD3 122 aa4.72□□□□□ -1.65
VAMP3-203ENST00000487194 C10orf99Q6UWK7 81 aa4.72□□□□□ -1.65
VAMP3-203ENST00000487194 SIGLEC15Q6ZMC9 328 aa4.72□□□□□ -1.65
VAMP3-203ENST00000487194 REC114Q7Z4M0 266 aa4.72□□□□□ -1.65
VAMP3-203ENST00000487194 C15orf54Q8N8G6 183 aa4.72□□□□□ -1.65
VAMP3-203ENST00000487194 ISOC2Q96AB3 205 aa4.72□□□□□ -1.65
VAMP3-203ENST00000487194 FMC1Q96HJ9 113 aa4.72□□□□□ -1.65
VAMP3-203ENST00000487194 BIN3Q9NQY0 253 aa4.72□□□□□ -1.65
VAMP3-203ENST00000487194 TRBV20OR9-2A0A075B6H5 130 aa4.71□□□□□ -1.66
VAMP3-203ENST00000487194 IGHV3-66A0A0C4DH42 116 aa4.71□□□□□ -1.66
VAMP3-203ENST00000487194 A8MWP6 167 aa4.71□□□□□ -1.66
VAMP3-203ENST00000487194 INAFM1C9JVW0 142 aa4.71□□□□□ -1.66
VAMP3-203ENST00000487194 LINC01619G3V211 115 aa4.71□□□□□ -1.66
VAMP3-203ENST00000487194 H7BYZ3 331 aa4.71□□□□□ -1.66
VAMP3-203ENST00000487194 SLC17A3O00476 420 aa4.71□□□□□ -1.66
VAMP3-203ENST00000487194 ZNF207O43670 478 aaKnown RBP4.71□□□□□ -1.66
VAMP3-203ENST00000487194 TCF21O43680 179 aa4.71□□□□□ -1.66
VAMP3-203ENST00000487194 APOHP02749 345 aaPredicted RBP4.71□□□□□ -1.66
VAMP3-203ENST00000487194 GNG5P63218 68 aa4.71□□□□□ -1.66
VAMP3-203ENST00000487194 RNF212Q495C1 297 aa4.71□□□□□ -1.66
VAMP3-203ENST00000487194 KHDC1LQ5JSQ8 128 aa4.71□□□□□ -1.66
VAMP3-203ENST00000487194 TMEM88Q6PEY1 159 aa4.71□□□□□ -1.66
VAMP3-203ENST00000487194 UNQ9165/PRO28630Q6UXU0 137 aa4.71□□□□□ -1.66
VAMP3-203ENST00000487194 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.71□□□□□ -1.66
VAMP3-203ENST00000487194 BAGE2Q86Y30 109 aa4.71□□□□□ -1.66
VAMP3-203ENST00000487194 C1QL4Q86Z23 238 aa4.71□□□□□ -1.66
VAMP3-203ENST00000487194 CBLN2Q8IUK8 224 aa4.71□□□□□ -1.66
VAMP3-203ENST00000487194 EXOC3-AS1Q8N2X6 119 aa4.71□□□□□ -1.66
VAMP3-203ENST00000487194 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.71□□□□□ -1.66
VAMP3-203ENST00000487194 TMEM75Q8N9X5 138 aa4.71□□□□□ -1.66
VAMP3-203ENST00000487194 LINC01006Q8NI28 216 aa4.71□□□□□ -1.66
VAMP3-203ENST00000487194 OCC1Q8TAD7 63 aa4.71□□□□□ -1.66
VAMP3-203ENST00000487194 WIPF2Q8TF74 440 aaPredicted RBP4.71□□□□□ -1.66
VAMP3-203ENST00000487194 C4orf3Q8WVX3 66 aa4.71□□□□□ -1.66
VAMP3-203ENST00000487194 GLMPQ8WWB7 406 aa4.71□□□□□ -1.66
VAMP3-203ENST00000487194 DPF1Q92782 380 aa4.71□□□□□ -1.66
VAMP3-203ENST00000487194 MRPL53Q96EL3 112 aaKnown RBP4.71□□□□□ -1.66
VAMP3-203ENST00000487194 IGF2BP2-AS1Q96M15 143 aa4.71□□□□□ -1.66
VAMP3-203ENST00000487194 C17orf77Q96MU5 243 aa4.71□□□□□ -1.66
VAMP3-203ENST00000487194 ZNF331Q9NQX6 463 aaPredicted RBP4.71□□□□□ -1.66
VAMP3-203ENST00000487194 SMPXQ9UHP9 88 aa4.71□□□□□ -1.66
VAMP3-203ENST00000487194 RPH3ALQ9UNE2 315 aa4.71□□□□□ -1.66
VAMP3-203ENST00000487194 SMAD5-AS1Q9Y6J3 95 aa4.71□□□□□ -1.66
VAMP3-203ENST00000487194 IGHV4OR15-8A0A075B7B6 117 aa4.7□□□□□ -1.66
VAMP3-203ENST00000487194 IGHV3OR16-13A0A075B7E8 117 aa4.7□□□□□ -1.66
VAMP3-203ENST00000487194 A0A087WW49 117 aa4.7□□□□□ -1.66
VAMP3-203ENST00000487194 IGHV3-49A0A0A0MS15 119 aa4.7□□□□□ -1.66
VAMP3-203ENST00000487194 IGHV3-74A0A0B4J1X5 117 aa4.7□□□□□ -1.66
VAMP3-203ENST00000487194 A0A1B0GUS0 222 aa4.7□□□□□ -1.66
VAMP3-203ENST00000487194 DIRC3C9JPN6 131 aa4.7□□□□□ -1.66
VAMP3-203ENST00000487194 M0QZ24 198 aa4.7□□□□□ -1.66
VAMP3-203ENST00000487194 CHEK1O14757 476 aa4.7□□□□□ -1.66
VAMP3-203ENST00000487194 CRLF1O75462 422 aa4.7□□□□□ -1.66
VAMP3-203ENST00000487194 GCGP01275 180 aa4.7□□□□□ -1.66
VAMP3-203ENST00000487194 LTAP01374 205 aa4.7□□□□□ -1.66
VAMP3-203ENST00000487194 S100PP25815 95 aa4.7□□□□□ -1.66
VAMP3-203ENST00000487194 HOXD3P31249 432 aaPredicted RBP4.7□□□□□ -1.66
VAMP3-203ENST00000487194 PSG3Q16557 428 aa4.7□□□□□ -1.66
VAMP3-203ENST00000487194 TM4SF20Q53R12 229 aa4.7□□□□□ -1.66
VAMP3-203ENST00000487194 KCNIP4Q6PIL6 250 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms