RNA–Protein interactions for RNA: ENST00000487172.1

PCOLCE-208, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 2

Gene PCOLCE, Length 686 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-208ENST00000487172 FAM122CQ6P4D5 195 aa14.37□□□□□ -0.11
PCOLCE-208ENST00000487172 SLC51BQ86UW2 128 aa14.37□□□□□ -0.11
PCOLCE-208ENST00000487172 SAT2Q96F10 170 aaPredicted RBP14.37□□□□□ -0.11
PCOLCE-208ENST00000487172 CITED4Q96RK1 184 aa14.37□□□□□ -0.11
PCOLCE-208ENST00000487172 SLC50A1Q9BRV3 221 aa14.37□□□□□ -0.11
PCOLCE-208ENST00000487172 TUBA4BQ9H853 241 aa14.37□□□□□ -0.11
PCOLCE-208ENST00000487172 ZNF586Q9NXT0 402 aa14.37□□□□□ -0.11
PCOLCE-208ENST00000487172 TRAV8-2A0A0B4J237 113 aa14.36□□□□□ -0.11
PCOLCE-208ENST00000487172 PYYP10082 97 aa14.36□□□□□ -0.11
PCOLCE-208ENST00000487172 CDC34P49427 236 aaPredicted RBP14.36□□□□□ -0.11
PCOLCE-208ENST00000487172 PSMG4Q5JS54 123 aa14.36□□□□□ -0.11
PCOLCE-208ENST00000487172 AKR1C8PQ5T2L2 129 aa14.36□□□□□ -0.11
PCOLCE-208ENST00000487172 LINC00322Q6ZN03 302 aaPredicted RBP14.36□□□□□ -0.11
PCOLCE-208ENST00000487172 APRG1Q8IVJ8 170 aa14.36□□□□□ -0.11
PCOLCE-208ENST00000487172 ZNF503Q96F45 646 aa14.36□□□□□ -0.11
PCOLCE-208ENST00000487172 PAXXQ9BUH6 204 aa14.36□□□□□ -0.11
PCOLCE-208ENST00000487172 ACTR3CQ9C0K3 210 aaPredicted RBP14.36□□□□□ -0.11
PCOLCE-208ENST00000487172 SRD5A3Q9H8P0 318 aa14.36□□□□□ -0.11
PCOLCE-208ENST00000487172 ZNF331Q9NQX6 463 aaPredicted RBP14.36□□□□□ -0.11
PCOLCE-208ENST00000487172 CLEC5AQ9NY25 188 aa14.36□□□□□ -0.11
PCOLCE-208ENST00000487172 FBN3Q75N90 2809 aa14.36□□□□□ -0.11
PCOLCE-208ENST00000487172 STAG3L2P0CL84 134 aa14.35□□□□□ -0.11
PCOLCE-208ENST00000487172 STAG3L3P0CL85 134 aa14.35□□□□□ -0.11
PCOLCE-208ENST00000487172 PDE6HQ13956 83 aa14.35□□□□□ -0.11
PCOLCE-208ENST00000487172 PQLC2Q6ZP29 291 aa14.35□□□□□ -0.11
PCOLCE-208ENST00000487172 LRRC20Q8TCA0 184 aa14.35□□□□□ -0.11
PCOLCE-208ENST00000487172 RNF141Q8WVD5 230 aa14.35□□□□□ -0.11
PCOLCE-208ENST00000487172 RAB24Q969Q5 203 aa14.35□□□□□ -0.11
PCOLCE-208ENST00000487172 TRBV19A0A075B6N1 114 aa14.34□□□□□ -0.11
PCOLCE-208ENST00000487172 UMAD1C9J7I0 102 aa14.34□□□□□ -0.11
PCOLCE-208ENST00000487172 OR7C2O60412 319 aa14.34□□□□□ -0.11
PCOLCE-208ENST00000487172 NBEAP1P0C6P0 100 aa14.34□□□□□ -0.11
PCOLCE-208ENST00000487172 FRMD6-AS1P0C7T7 363 aa14.34□□□□□ -0.11
PCOLCE-208ENST00000487172 ZNF124Q15973 351 aa14.34□□□□□ -0.11
PCOLCE-208ENST00000487172 EIF5AL1Q6IS14 154 aaKnown RBP14.34□□□□□ -0.11
PCOLCE-208ENST00000487172 FXYD5Q96DB9 178 aa14.34□□□□□ -0.11
PCOLCE-208ENST00000487172 LINC00052Q96N35 136 aa14.34□□□□□ -0.11
PCOLCE-208ENST00000487172 CTXND1A0A1B0GTU2 59 aa14.33□□□□□ -0.12
PCOLCE-208ENST00000487172 RBMY1BA6NDE4 496 aaKnown RBP14.33□□□□□ -0.12
PCOLCE-208ENST00000487172 RBMY1EA6NEQ0 496 aaKnown RBP14.33□□□□□ -0.12
PCOLCE-208ENST00000487172 SNRPCP09234 159 aaKnown RBP14.33□□□□□ -0.12
PCOLCE-208ENST00000487172 RBMY1DP0C7P1 496 aaKnown RBP14.33□□□□□ -0.12
PCOLCE-208ENST00000487172 C20orf173Q96LM9 149 aa14.33□□□□□ -0.12
PCOLCE-208ENST00000487172 PLA2G2EQ9NZK7 142 aa14.33□□□□□ -0.12
PCOLCE-208ENST00000487172 LOC102724200A0A096LPH7 203 aaPredicted RBP14.32□□□□□ -0.12
PCOLCE-208ENST00000487172 SLC17A3O00476 420 aa14.32□□□□□ -0.12
PCOLCE-208ENST00000487172 NDUFB4O95168 129 aa14.32□□□□□ -0.12
PCOLCE-208ENST00000487172 NKX2-5P52952 324 aaPredicted RBP14.32□□□□□ -0.12
PCOLCE-208ENST00000487172 PSG9Q00887 426 aa14.32□□□□□ -0.12
PCOLCE-208ENST00000487172 PSG3Q16557 428 aa14.32□□□□□ -0.12
PCOLCE-208ENST00000487172 H3BTX0 84 aa14.31□□□□□ -0.12
PCOLCE-208ENST00000487172 EIF3GO75821 320 aaKnown RBP eCLIP14.31□□□□□ -0.12
PCOLCE-208ENST00000487172 OR10J4P0C629 311 aa14.31□□□□□ -0.12
PCOLCE-208ENST00000487172 ZNF726P1Q15940 193 aa14.31□□□□□ -0.12
PCOLCE-208ENST00000487172 IGFL4Q6B9Z1 124 aa14.31□□□□□ -0.12
PCOLCE-208ENST00000487172 FOXI2Q6ZQN5 318 aa14.31□□□□□ -0.12
PCOLCE-208ENST00000487172 TMED6Q8WW62 240 aa14.31□□□□□ -0.12
PCOLCE-208ENST00000487172 B9D2Q9BPU9 175 aa14.31□□□□□ -0.12
PCOLCE-208ENST00000487172 SAV1Q9H4B6 383 aaPredicted RBP14.31□□□□□ -0.12
PCOLCE-208ENST00000487172 HMGB3O15347 200 aaKnown RBP14.3□□□□□ -0.12
PCOLCE-208ENST00000487172 UBE2L3P68036 154 aaKnown RBP14.3□□□□□ -0.12
PCOLCE-208ENST00000487172 DPPA3Q6W0C5 159 aa14.3□□□□□ -0.12
PCOLCE-208ENST00000487172 STHQ8IWL8 128 aa14.3□□□□□ -0.12
PCOLCE-208ENST00000487172 LYPD1Q8N2G4 141 aa14.3□□□□□ -0.12
PCOLCE-208ENST00000487172 RNF182Q8N6D2 247 aa14.3□□□□□ -0.12
PCOLCE-208ENST00000487172 SUN5Q8TC36 379 aa14.3□□□□□ -0.12
PCOLCE-208ENST00000487172 BLNKQ8WV28 456 aa14.3□□□□□ -0.12
PCOLCE-208ENST00000487172 KNCNA6PVL3 124 aa14.29□□□□□ -0.12
PCOLCE-208ENST00000487172 CXorf1O96002 111 aa14.29□□□□□ -0.12
PCOLCE-208ENST00000487172 ARL14EPLP0DKL9 152 aa14.29□□□□□ -0.12
PCOLCE-208ENST00000487172 HLA-DMBP28068 263 aa14.29□□□□□ -0.12
PCOLCE-208ENST00000487172 SSX7Q7RTT5 188 aa14.29□□□□□ -0.12
PCOLCE-208ENST00000487172 TRPT1Q86TN4 253 aaKnown RBP14.29□□□□□ -0.12
PCOLCE-208ENST00000487172 MRPL53Q96EL3 112 aaKnown RBP14.29□□□□□ -0.12
PCOLCE-208ENST00000487172 PRELID1Q9Y255 219 aa14.29□□□□□ -0.12
PCOLCE-208ENST00000487172 KIR2DL5BA0A0G2JN68 375 aa14.28□□□□□ -0.12
PCOLCE-208ENST00000487172 KIR2DL5BA0A0G2JPC4 375 aa14.28□□□□□ -0.12
PCOLCE-208ENST00000487172 A0A0J9YX75 114 aa14.28□□□□□ -0.12
PCOLCE-208ENST00000487172 H3BMM0 161 aa14.28□□□□□ -0.12
PCOLCE-208ENST00000487172 HLA-DRB4P13762 266 aa14.28□□□□□ -0.12
PCOLCE-208ENST00000487172 RAB5CP51148 216 aa14.28□□□□□ -0.12
PCOLCE-208ENST00000487172 ACTL10Q5JWF8 245 aa14.28□□□□□ -0.12
PCOLCE-208ENST00000487172 EBLN2Q6P2I7 272 aa14.28□□□□□ -0.12
PCOLCE-208ENST00000487172 KIR2DL5AQ8N109 375 aa14.28□□□□□ -0.12
PCOLCE-208ENST00000487172 KIR2DL5BQ8NHK3 375 aa14.28□□□□□ -0.12
PCOLCE-208ENST00000487172 CLUHP3Q96NS8 147 aa14.28□□□□□ -0.12
PCOLCE-208ENST00000487172 AAMDCQ9H7C9 122 aa14.28□□□□□ -0.12
PCOLCE-208ENST00000487172 HLA-DRB4X5D2U9 266 aa14.28□□□□□ -0.12
PCOLCE-208ENST00000487172 MEGF8Q7Z7M0 2845 aa14.28□□□□□ -0.12
PCOLCE-208ENST00000487172 GCHFRP30047 84 aa14.27□□□□□ -0.13
PCOLCE-208ENST00000487172 HAGHQ16775 308 aa14.27□□□□□ -0.13
PCOLCE-208ENST00000487172 GDF5OSQ5U4N7 250 aa14.27□□□□□ -0.13
PCOLCE-208ENST00000487172 ZNF738Q8NE65 137 aa14.27□□□□□ -0.13
PCOLCE-208ENST00000487172 MBD3L1Q8WWY6 194 aa14.27□□□□□ -0.13
PCOLCE-208ENST00000487172 PHYHIPLQ96FC7 376 aa14.27□□□□□ -0.13
PCOLCE-208ENST00000487172 TMEM167BQ9NRX6 74 aa14.27□□□□□ -0.13
PCOLCE-208ENST00000487172 BOLA1Q9Y3E2 137 aa14.27□□□□□ -0.13
PCOLCE-208ENST00000487172 RPL35AP18077 110 aaKnown RBP14.26□□□□□ -0.13
PCOLCE-208ENST00000487172 FHITP49789 147 aa14.26□□□□□ -0.13
PCOLCE-208ENST00000487172 SULT1A2P50226 295 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 890 ms