RNA–Protein interactions for RNA: ENST00000486960.5

SF1-217, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 719 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-217ENST00000486960 SSR2P43308 183 aa4.2□□□□□ -1.74
SF1-217ENST00000486960 PSMB3P49720 205 aa4.2□□□□□ -1.74
SF1-217ENST00000486960 TMBIM6P55061 237 aa4.2□□□□□ -1.74
SF1-217ENST00000486960 BTG2P78543 158 aa4.2□□□□□ -1.74
SF1-217ENST00000486960 HOXC5Q00444 222 aa4.2□□□□□ -1.74
SF1-217ENST00000486960 HES1Q14469 280 aa4.2□□□□□ -1.74
SF1-217ENST00000486960 ZNF141Q15928 474 aa4.2□□□□□ -1.74
SF1-217ENST00000486960 FAM74A1Q5RGS3 127 aa4.2□□□□□ -1.74
SF1-217ENST00000486960 C1orf100Q5SVJ3 147 aa4.2□□□□□ -1.74
SF1-217ENST00000486960 XP32Q5T750 250 aa4.2□□□□□ -1.74
SF1-217ENST00000486960 Q6ZSN1 163 aa4.2□□□□□ -1.74
SF1-217ENST00000486960 MSRB3Q8IXL7 192 aa4.2□□□□□ -1.74
SF1-217ENST00000486960 CLECL1Q8IZS7 167 aa4.2□□□□□ -1.74
SF1-217ENST00000486960 C10orf111Q8N326 155 aa4.2□□□□□ -1.74
SF1-217ENST00000486960 ZNF664Q8N3J9 261 aa4.2□□□□□ -1.74
SF1-217ENST00000486960 METTL27Q8N6F8 245 aaPredicted RBP4.2□□□□□ -1.74
SF1-217ENST00000486960 TEX29Q8N6K0 151 aa4.2□□□□□ -1.74
SF1-217ENST00000486960 OR10D4PQ8NGN7 298 aa4.2□□□□□ -1.74
SF1-217ENST00000486960 NABP1Q96AH0 204 aa4.2□□□□□ -1.74
SF1-217ENST00000486960 GPX7Q96SL4 187 aaPredicted RBP4.2□□□□□ -1.74
SF1-217ENST00000486960 ZNF747Q9BV97 191 aa4.2□□□□□ -1.74
SF1-217ENST00000486960 DPY30Q9C005 99 aa4.2□□□□□ -1.74
SF1-217ENST00000486960 CACNG5Q9UF02 275 aa4.2□□□□□ -1.74
SF1-217ENST00000486960 NUFIP1Q9UHK0 495 aaKnown RBP4.2□□□□□ -1.74
SF1-217ENST00000486960 SCN3AQ9NY46 2000 aa4.2□□□□□ -1.74
SF1-217ENST00000486960 KMT2AQ03164 3969 aa4.2□□□□□ -1.74
SF1-217ENST00000486960 IGLV5-37A0A075B6J1 123 aa4.19□□□□□ -1.74
SF1-217ENST00000486960 A0A1W2PP18 115 aa4.19□□□□□ -1.74
SF1-217ENST00000486960 IZUMO1RA6ND01 250 aa4.19□□□□□ -1.74
SF1-217ENST00000486960 LY6LH3BQJ8 138 aa4.19□□□□□ -1.74
SF1-217ENST00000486960 K7EQD1 137 aa4.19□□□□□ -1.74
SF1-217ENST00000486960 ISLRO14498 428 aa4.19□□□□□ -1.74
SF1-217ENST00000486960 PGLYRP1O75594 196 aaPredicted RBP4.19□□□□□ -1.74
SF1-217ENST00000486960 TRGC2P03986 189 aa4.19□□□□□ -1.74
SF1-217ENST00000486960 SPINK8P0C7L1 97 aa4.19□□□□□ -1.74
SF1-217ENST00000486960 SCGB1C2P0DMR2 95 aa4.19□□□□□ -1.74
SF1-217ENST00000486960 IGLL1P15814 213 aa4.19□□□□□ -1.74
SF1-217ENST00000486960 S100A3P33764 101 aa4.19□□□□□ -1.74
SF1-217ENST00000486960 SDC2P34741 201 aa4.19□□□□□ -1.74
SF1-217ENST00000486960 OPRM1P35372 400 aa4.19□□□□□ -1.74
SF1-217ENST00000486960 OPRK1P41145 380 aa4.19□□□□□ -1.74
SF1-217ENST00000486960 SELENOPP49908 381 aa4.19□□□□□ -1.74
SF1-217ENST00000486960 AKR1C2P52895 323 aa4.19□□□□□ -1.74
SF1-217ENST00000486960 TAS2R19P59542 299 aa4.19□□□□□ -1.74
SF1-217ENST00000486960 DCDP81605 110 aaKnown RBP4.19□□□□□ -1.74
SF1-217ENST00000486960 Q6ZPA2 131 aa4.19□□□□□ -1.74
SF1-217ENST00000486960 SSX8Q7RTT4 187 aa4.19□□□□□ -1.74
SF1-217ENST00000486960 FAM19A3Q7Z5A8 133 aa4.19□□□□□ -1.74
SF1-217ENST00000486960 KTN1-AS1Q86SY8 53 aa4.19□□□□□ -1.74
SF1-217ENST00000486960 WDR86Q86TI4 376 aa4.19□□□□□ -1.74
SF1-217ENST00000486960 NR2C2APQ86WQ0 139 aa4.19□□□□□ -1.74
SF1-217ENST00000486960 C3orf56Q8N813 242 aa4.19□□□□□ -1.74
SF1-217ENST00000486960 ZDHHC22Q8N966 263 aa4.19□□□□□ -1.74
SF1-217ENST00000486960 ZFP62Q8NB50 900 aaPredicted RBP4.19□□□□□ -1.74
SF1-217ENST00000486960 PRSS3P2Q8NHM4 247 aa4.19□□□□□ -1.74
SF1-217ENST00000486960 SCGB1C1Q8TD33 95 aa4.19□□□□□ -1.74
SF1-217ENST00000486960 NAA38Q9BRA0 125 aaKnown RBP4.19□□□□□ -1.74
SF1-217ENST00000486960 MRPL32Q9BYC8 188 aaKnown RBP4.19□□□□□ -1.74
SF1-217ENST00000486960 ZNF436Q9C0F3 470 aaPredicted RBP4.19□□□□□ -1.74
SF1-217ENST00000486960 CBLN4Q9NTU7 201 aa4.19□□□□□ -1.74
SF1-217ENST00000486960 ZNF835Q9Y2P0 537 aa4.19□□□□□ -1.74
SF1-217ENST00000486960 NOP16Q9Y3C1 178 aaKnown RBP4.19□□□□□ -1.74
SF1-217ENST00000486960 AP4S1Q9Y587 144 aa4.19□□□□□ -1.74
SF1-217ENST00000486960 PLCE1Q9P212 2302 aa4.18□□□□□ -1.74
SF1-217ENST00000486960 TRAV9-1A0A075B6T8 112 aa4.18□□□□□ -1.74
SF1-217ENST00000486960 TRAV9-2A0A087WT02 112 aa4.18□□□□□ -1.74
SF1-217ENST00000486960 IGHV6-1A0A0B4J1U7 121 aa4.18□□□□□ -1.74
SF1-217ENST00000486960 ARRDC5A6NEK1 342 aa4.18□□□□□ -1.74
SF1-217ENST00000486960 FAM220BPB1ANY3 271 aa4.18□□□□□ -1.74
SF1-217ENST00000486960 TMEM250H0YL14 139 aa4.18□□□□□ -1.74
SF1-217ENST00000486960 M0R381 172 aa4.18□□□□□ -1.74
SF1-217ENST00000486960 UBE2L6O14933 153 aa4.18□□□□□ -1.74
SF1-217ENST00000486960 COX7A2P2O60397 106 aa4.18□□□□□ -1.74
SF1-217ENST00000486960 ZNF432O94892 652 aa4.18□□□□□ -1.74
SF1-217ENST00000486960 CPSF4O95639 269 aaKnown RBP4.18□□□□□ -1.74
SF1-217ENST00000486960 KRASP01116 189 aa4.18□□□□□ -1.74
SF1-217ENST00000486960 TSHBP01222 138 aa4.18□□□□□ -1.74
SF1-217ENST00000486960 CTSDP07339 412 aaPredicted RBP4.18□□□□□ -1.74
SF1-217ENST00000486960 CRYGSP22914 178 aa4.18□□□□□ -1.74
SF1-217ENST00000486960 PSMB8P28062 276 aa4.18□□□□□ -1.74
SF1-217ENST00000486960 NUDT2P50583 147 aa4.18□□□□□ -1.74
SF1-217ENST00000486960 PLGLB1Q02325 96 aa4.18□□□□□ -1.74
SF1-217ENST00000486960 CATR1Q13166 79 aa4.18□□□□□ -1.74
SF1-217ENST00000486960 IQCJQ1A5X6 159 aa4.18□□□□□ -1.74
SF1-217ENST00000486960 SLC48A1Q6P1K1 146 aa4.18□□□□□ -1.74
SF1-217ENST00000486960 TRPT1Q86TN4 253 aaKnown RBP4.18□□□□□ -1.74
SF1-217ENST00000486960 C1orf174Q8IYL3 243 aa4.18□□□□□ -1.74
SF1-217ENST00000486960 DEFB107AQ8IZN7 70 aa4.18□□□□□ -1.74
SF1-217ENST00000486960 SLC22A24Q8N4F4 322 aa4.18□□□□□ -1.74
SF1-217ENST00000486960 LINC00337Q8N6G1 96 aa4.18□□□□□ -1.74
SF1-217ENST00000486960 MRPL30Q8TCC3 161 aaKnown RBP4.18□□□□□ -1.74
SF1-217ENST00000486960 C15orf40Q8WUR7 153 aa4.18□□□□□ -1.74
SF1-217ENST00000486960 RTN4IP1Q8WWV3 396 aaPredicted RBP4.18□□□□□ -1.74
SF1-217ENST00000486960 CNRIP1Q96F85 164 aaPredicted RBP4.18□□□□□ -1.74
SF1-217ENST00000486960 C2orf50Q96LR7 162 aa4.18□□□□□ -1.74
SF1-217ENST00000486960 SDF2Q99470 211 aa4.18□□□□□ -1.74
SF1-217ENST00000486960 S100A13Q99584 98 aa4.18□□□□□ -1.74
SF1-217ENST00000486960 POLR2J3Q9H1A7 115 aaKnown RBP4.18□□□□□ -1.74
SF1-217ENST00000486960 C11orf68Q9H3H3 251 aaKnown RBP4.18□□□□□ -1.74
SF1-217ENST00000486960 DUSP21Q9H596 190 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms