RNA–Protein interactions for RNA: ENST00000486711.1

SMC4-218, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 621 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-218ENST00000486711 CAMSAP2Q08AD1 1489 aa1.21□□□□□ -2.22
SMC4-218ENST00000486711 TRAV27A0A087WT01 109 aa1.21□□□□□ -2.22
SMC4-218ENST00000486711 IGLV3-32A0A0A0MS00 114 aa1.21□□□□□ -2.22
SMC4-218ENST00000486711 ODAMA1E959 279 aa1.21□□□□□ -2.22
SMC4-218ENST00000486711 B4DSR2 109 aa1.21□□□□□ -2.22
SMC4-218ENST00000486711 PFDN1O60925 122 aa1.21□□□□□ -2.22
SMC4-218ENST00000486711 CST7O76096 145 aa1.21□□□□□ -2.22
SMC4-218ENST00000486711 CRYBA4P53673 196 aa1.21□□□□□ -2.22
SMC4-218ENST00000486711 MSMO1Q15800 293 aa1.21□□□□□ -2.22
SMC4-218ENST00000486711 RTL8BQ17RB0 113 aa1.21□□□□□ -2.22
SMC4-218ENST00000486711 LRRC18Q8N456 261 aa1.21□□□□□ -2.22
SMC4-218ENST00000486711 GGACTQ9BVM4 153 aa1.21□□□□□ -2.22
SMC4-218ENST00000486711 KMT2BQ9UMN6 2715 aaPredicted RBP1.21□□□□□ -2.22
SMC4-218ENST00000486711 MYH7BA7E2Y1 1941 aa1.21□□□□□ -2.22
SMC4-218ENST00000486711 CEP192Q8TEP8 1941 aa1.21□□□□□ -2.22
SMC4-218ENST00000486711 K7ERJ3 54 aa1.2□□□□□ -2.22
SMC4-218ENST00000486711 LYRM1O43325 122 aa1.2□□□□□ -2.22
SMC4-218ENST00000486711 IGLV1-51P01701 117 aa1.2□□□□□ -2.22
SMC4-218ENST00000486711 COX7CP15954 63 aa1.2□□□□□ -2.22
SMC4-218ENST00000486711 VBP1P61758 197 aa1.2□□□□□ -2.22
SMC4-218ENST00000486711 HBBP68871 147 aa1.2□□□□□ -2.22
SMC4-218ENST00000486711 FKBP1CQ5VVH2 108 aa1.2□□□□□ -2.22
SMC4-218ENST00000486711 ARPINQ7Z6K5 226 aa1.2□□□□□ -2.22
SMC4-218ENST00000486711 OR5AS1Q8N127 324 aa1.2□□□□□ -2.22
SMC4-218ENST00000486711 PLPP5Q8NEB5 264 aa1.2□□□□□ -2.22
SMC4-218ENST00000486711 TMEM138Q9NPI0 162 aa1.2□□□□□ -2.22
SMC4-218ENST00000486711 TNFSF18Q9UNG2 199 aa1.2□□□□□ -2.22
SMC4-218ENST00000486711 YTHDC2Q9H6S0 1430 aaKnown RBP1.2□□□□□ -2.22
SMC4-218ENST00000486711 hDV103S1A0JD37 113 aa1.19□□□□□ -2.22
SMC4-218ENST00000486711 H3BQV1 296 aa1.19□□□□□ -2.22
SMC4-218ENST00000486711 NCR3O14931 201 aa1.19□□□□□ -2.22
SMC4-218ENST00000486711 KLF7O75840 302 aaPredicted RBP1.19□□□□□ -2.22
SMC4-218ENST00000486711 RPL35P42766 123 aaKnown RBP1.19□□□□□ -2.22
SMC4-218ENST00000486711 LTC4SQ16873 150 aa1.19□□□□□ -2.22
SMC4-218ENST00000486711 DCUN1D2Q6PH85 259 aa1.19□□□□□ -2.22
SMC4-218ENST00000486711 HAGHLQ6PII5 290 aaPredicted RBP1.19□□□□□ -2.22
SMC4-218ENST00000486711 Q8TAT8 98 aa1.19□□□□□ -2.22
SMC4-218ENST00000486711 OR2H1Q9GZK4 316 aa1.19□□□□□ -2.22
SMC4-218ENST00000486711 SCN3AQ9NY46 2000 aa1.19□□□□□ -2.22
SMC4-218ENST00000486711 V9GYQ6 96 aa1.19□□□□□ -2.22
SMC4-218ENST00000486711 MYH10P35580 1976 aa1.19□□□□□ -2.22
SMC4-218ENST00000486711 LAMB4A4D0S4 1761 aa1.19□□□□□ -2.22
SMC4-218ENST00000486711 CD109Q6YHK3 1445 aa1.18□□□□□ -2.22
SMC4-218ENST00000486711 CIRBPQ14011 172 aaKnown RBP1.18□□□□□ -2.22
SMC4-218ENST00000486711 OR10AG1Q8NH19 301 aa1.18□□□□□ -2.22
SMC4-218ENST00000486711 PCBD2Q9H0N5 130 aa1.18□□□□□ -2.22
SMC4-218ENST00000486711 MAP1LC3B2A6NCE7 125 aa1.17□□□□□ -2.22
SMC4-218ENST00000486711 EIF3IQ13347 325 aaKnown RBP1.17□□□□□ -2.22
SMC4-218ENST00000486711 KRTAP26-1Q6PEX3 210 aa1.17□□□□□ -2.22
SMC4-218ENST00000486711 PHF5AQ7RTV0 110 aaKnown RBP1.17□□□□□ -2.22
SMC4-218ENST00000486711 STX12Q86Y82 276 aa1.17□□□□□ -2.22
SMC4-218ENST00000486711 FAM216BQ8N7L0 139 aa1.17□□□□□ -2.22
SMC4-218ENST00000486711 ISOC1Q96CN7 298 aa1.17□□□□□ -2.22
SMC4-218ENST00000486711 BORCS8Q96FH0 119 aa1.17□□□□□ -2.22
SMC4-218ENST00000486711 ATPIF1Q9UII2 106 aa1.17□□□□□ -2.22
SMC4-218ENST00000486711 NUBP2Q9Y5Y2 271 aa1.17□□□□□ -2.22
SMC4-218ENST00000486711 DOCK4Q8N1I0 1966 aa1.16□□□□□ -2.22
SMC4-218ENST00000486711 TMEM14EPQ6UXP3 125 aa1.16□□□□□ -2.22
SMC4-218ENST00000486711 RNF11Q9Y3C5 154 aa1.16□□□□□ -2.22
SMC4-218ENST00000486711 ASB4Q9Y574 426 aa1.16□□□□□ -2.22
SMC4-218ENST00000486711 SYNMO15061 1565 aa1.16□□□□□ -2.22
SMC4-218ENST00000486711 NUP98P52948 1817 aa1.15□□□□□ -2.22
SMC4-218ENST00000486711 A0A096LPI6 279 aa1.15□□□□□ -2.23
SMC4-218ENST00000486711 MT-ND6P03923 174 aa1.15□□□□□ -2.23
SMC4-218ENST00000486711 MCEEQ96PE7 176 aa1.15□□□□□ -2.23
SMC4-218ENST00000486711 NCOA6Q14686 2063 aaPredicted RBP1.15□□□□□ -2.23
SMC4-218ENST00000486711 UBR2Q8IWV8 1755 aa1.14□□□□□ -2.23
SMC4-218ENST00000486711 CECR2Q9BXF3 1484 aa1.14□□□□□ -2.23
SMC4-218ENST00000486711 KPNA4O00629 521 aaPredicted RBP1.14□□□□□ -2.23
SMC4-218ENST00000486711 FABP1P07148 127 aa1.14□□□□□ -2.23
SMC4-218ENST00000486711 PRR15Q8IV56 129 aa1.14□□□□□ -2.23
SMC4-218ENST00000486711 PSMF1Q92530 271 aa1.14□□□□□ -2.23
SMC4-218ENST00000486711 CCDC32Q9BV29 185 aa1.14□□□□□ -2.23
SMC4-218ENST00000486711 TCEAL2Q9H3H9 227 aaPredicted RBP1.14□□□□□ -2.23
SMC4-218ENST00000486711 OTORQ9NRC9 128 aa1.14□□□□□ -2.23
SMC4-218ENST00000486711 NAT8BQ9UHF3 227 aa1.14□□□□□ -2.23
SMC4-218ENST00000486711 LAMTOR2Q9Y2Q5 125 aa1.14□□□□□ -2.23
SMC4-218ENST00000486711 TNRC6AQ8NDV7 1962 aaKnown RBP1.14□□□□□ -2.23
SMC4-218ENST00000486711 RFX7Q2KHR2 1363 aa1.13□□□□□ -2.23
SMC4-218ENST00000486711 A0A1B0GV72 72 aa1.13□□□□□ -2.23
SMC4-218ENST00000486711 C9orf170A2RU37 121 aa1.13□□□□□ -2.23
SMC4-218ENST00000486711 FABP2P12104 132 aa1.13□□□□□ -2.23
SMC4-218ENST00000486711 TMEM78Q5T7P6 136 aa1.13□□□□□ -2.23
SMC4-218ENST00000486711 CENPHQ9H3R5 247 aa1.13□□□□□ -2.23
SMC4-218ENST00000486711 HSPB8Q9UJY1 196 aa1.13□□□□□ -2.23
SMC4-218ENST00000486711 TPRKBQ9Y3C4 175 aa1.13□□□□□ -2.23
SMC4-218ENST00000486711 ROS1P08922 2347 aa1.13□□□□□ -2.23
SMC4-218ENST00000486711 RTL9Q8NET4 1388 aa1.12□□□□□ -2.23
SMC4-218ENST00000486711 CCDC180Q9P1Z9 1646 aa1.12□□□□□ -2.23
SMC4-218ENST00000486711 TRDV1A0A1B0GX56 115 aa1.12□□□□□ -2.23
SMC4-218ENST00000486711 E7EQ34 232 aa1.12□□□□□ -2.23
SMC4-218ENST00000486711 C5orf67F2Z3F1 127 aa1.12□□□□□ -2.23
SMC4-218ENST00000486711 JMJD7-PLA2G4BH0Y9G9 81 aa1.12□□□□□ -2.23
SMC4-218ENST00000486711 PPYP01298 95 aa1.12□□□□□ -2.23
SMC4-218ENST00000486711 BCL2P10415 239 aa1.12□□□□□ -2.23
SMC4-218ENST00000486711 NDUFA6P56556 154 aa1.12□□□□□ -2.23
SMC4-218ENST00000486711 MRPS36P82909 103 aaKnown RBP1.12□□□□□ -2.23
SMC4-218ENST00000486711 VMA21Q3ZAQ7 101 aa1.12□□□□□ -2.23
SMC4-218ENST00000486711 SREK1IP1Q8N9Q2 155 aaPredicted RBP1.12□□□□□ -2.23
SMC4-218ENST00000486711 OR4B1Q8NGF8 309 aa1.12□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms