RNA–Protein interactions for RNA: ENST00000485628.2

APOE-205, Transcript of apolipoprotein E, humanhuman

TSL 1 (best)

Gene APOE, Length 771 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-205ENST00000485628 PDE6HQ13956 83 aa11.84□□□□□ -0.51
APOE-205ENST00000485628 GUK1Q16774 197 aa11.84□□□□□ -0.51
APOE-205ENST00000485628 KPRPQ5T749 579 aaPredicted RBP11.84□□□□□ -0.51
APOE-205ENST00000485628 LCN12Q6JVE5 192 aa11.84□□□□□ -0.51
APOE-205ENST00000485628 MAP1LC3BQ9GZQ8 125 aa11.84□□□□□ -0.51
APOE-205ENST00000485628 NBEAL1Q6ZS30 2694 aa11.83□□□□□ -0.51
APOE-205ENST00000485628 DNAH3Q8TD57 4116 aa11.83□□□□□ -0.52
APOE-205ENST00000485628 TRAV8-2A0A0B4J237 113 aa11.83□□□□□ -0.52
APOE-205ENST00000485628 H2AFB1P0C5Y9 115 aa11.83□□□□□ -0.52
APOE-205ENST00000485628 LCN15Q6UWW0 184 aa11.83□□□□□ -0.52
APOE-205ENST00000485628 RBPMS2Q6ZRY4 209 aaKnown RBP11.83□□□□□ -0.52
APOE-205ENST00000485628 LRRC20Q8TCA0 184 aa11.83□□□□□ -0.52
APOE-205ENST00000485628 ZNF331Q9NQX6 463 aaPredicted RBP11.83□□□□□ -0.52
APOE-205ENST00000485628 C19orf73Q9NVV2 129 aa11.83□□□□□ -0.52
APOE-205ENST00000485628 ZNF705EA8MWA4 302 aaPredicted RBP11.82□□□□□ -0.52
APOE-205ENST00000485628 SLC17A3O00476 420 aa11.82□□□□□ -0.52
APOE-205ENST00000485628 OR7C2O60412 319 aa11.82□□□□□ -0.52
APOE-205ENST00000485628 OR10J4P0C629 311 aa11.82□□□□□ -0.52
APOE-205ENST00000485628 KRTAP10-11P60412 298 aa11.82□□□□□ -0.52
APOE-205ENST00000485628 BLOC1S1P78537 153 aa11.82□□□□□ -0.52
APOE-205ENST00000485628 SFT2D1Q8WV19 159 aa11.82□□□□□ -0.52
APOE-205ENST00000485628 FAM110AQ9BQ89 295 aa11.82□□□□□ -0.52
APOE-205ENST00000485628 TMPRSS5Q9H3S3 457 aa11.82□□□□□ -0.52
APOE-205ENST00000485628 UBQLN2Q9UHD9 624 aa11.82□□□□□ -0.52
APOE-205ENST00000485628 G3V4G9 280 aa11.81□□□□□ -0.52
APOE-205ENST00000485628 ISLRO14498 428 aa11.81□□□□□ -0.52
APOE-205ENST00000485628 RGS13O14921 159 aa11.81□□□□□ -0.52
APOE-205ENST00000485628 NMBP08949 121 aa11.81□□□□□ -0.52
APOE-205ENST00000485628 ATF4P18848 351 aaPredicted RBP11.81□□□□□ -0.52
APOE-205ENST00000485628 FGF8P55075 233 aaPredicted RBP11.81□□□□□ -0.52
APOE-205ENST00000485628 CCL20P78556 96 aa11.81□□□□□ -0.52
APOE-205ENST00000485628 ZNF767PQ75MW2 155 aa11.81□□□□□ -0.52
APOE-205ENST00000485628 LYPD1Q8N2G4 141 aa11.81□□□□□ -0.52
APOE-205ENST00000485628 FAM24BQ8N5W8 94 aa11.81□□□□□ -0.52
APOE-205ENST00000485628 TMEM167BQ9NRX6 74 aa11.81□□□□□ -0.52
APOE-205ENST00000485628 NOTCH1P46531 2555 aa11.8□□□□□ -0.52
APOE-205ENST00000485628 PSMB3P49720 205 aa11.8□□□□□ -0.52
APOE-205ENST00000485628 UBE2L3P68036 154 aaKnown RBP11.8□□□□□ -0.52
APOE-205ENST00000485628 PAFAH1B2P68402 229 aa11.8□□□□□ -0.52
APOE-205ENST00000485628 SAMD13Q5VXD3 122 aa11.8□□□□□ -0.52
APOE-205ENST00000485628 GBGT1Q8N5D6 347 aa11.8□□□□□ -0.52
APOE-205ENST00000485628 SLC50A1Q9BRV3 221 aa11.8□□□□□ -0.52
APOE-205ENST00000485628 OR4C46A6NHA9 309 aa11.79□□□□□ -0.52
APOE-205ENST00000485628 HBE1P02100 147 aa11.79□□□□□ -0.52
APOE-205ENST00000485628 SNRPCP09234 159 aaKnown RBP11.79□□□□□ -0.52
APOE-205ENST00000485628 RPL11P62913 178 aaKnown RBP11.79□□□□□ -0.52
APOE-205ENST00000485628 ODF3L2Q3SX64 289 aa11.79□□□□□ -0.52
APOE-205ENST00000485628 Q8N1Y9 231 aa11.79□□□□□ -0.52
APOE-205ENST00000485628 C20orf173Q96LM9 149 aa11.79□□□□□ -0.52
APOE-205ENST00000485628 ARL2-SNX15V9GYD0 113 aa11.79□□□□□ -0.52
APOE-205ENST00000485628 IGKV3-7A0A075B6H7 116 aa11.78□□□□□ -0.52
APOE-205ENST00000485628 A0A1W2PRE2 83 aa11.78□□□□□ -0.52
APOE-205ENST00000485628 H3BTX0 84 aa11.78□□□□□ -0.52
APOE-205ENST00000485628 DNASE2O00115 360 aaPredicted RBP11.78□□□□□ -0.52
APOE-205ENST00000485628 CCDC28AQ8IWP9 274 aa11.78□□□□□ -0.52
APOE-205ENST00000485628 ARL6IP6Q8N6S5 226 aa11.78□□□□□ -0.52
APOE-205ENST00000485628 CLEC5AQ9NY25 188 aa11.78□□□□□ -0.52
APOE-205ENST00000485628 PSG9Q00887 426 aa11.77□□□□□ -0.53
APOE-205ENST00000485628 GUCA2BQ16661 112 aa11.77□□□□□ -0.53
APOE-205ENST00000485628 BLNKQ8WV28 456 aa11.77□□□□□ -0.53
APOE-205ENST00000485628 YTHDF2Q9Y5A9 579 aaKnown RBP11.77□□□□□ -0.53
APOE-205ENST00000485628 FAM74A7A6NL05 159 aa11.76□□□□□ -0.53
APOE-205ENST00000485628 CD7P09564 240 aa11.76□□□□□ -0.53
APOE-205ENST00000485628 HLA-DMBP28068 263 aa11.76□□□□□ -0.53
APOE-205ENST00000485628 TFPI2P48307 235 aa11.76□□□□□ -0.53
APOE-205ENST00000485628 PSG3Q16557 428 aa11.76□□□□□ -0.53
APOE-205ENST00000485628 IGFL4Q6B9Z1 124 aa11.76□□□□□ -0.53
APOE-205ENST00000485628 WFDC3Q8IUB2 231 aa11.76□□□□□ -0.53
APOE-205ENST00000485628 MRPL53Q96EL3 112 aaKnown RBP11.76□□□□□ -0.53
APOE-205ENST00000485628 C16orf92Q96LL3 132 aa11.76□□□□□ -0.53
APOE-205ENST00000485628 Q9H3A6 140 aa11.76□□□□□ -0.53
APOE-205ENST00000485628 MAP6D1Q9H9H5 199 aa11.76□□□□□ -0.53
APOE-205ENST00000485628 ZMAT5Q9UDW3 170 aaKnown RBP11.76□□□□□ -0.53
APOE-205ENST00000485628 GGTLC3B5MD39 225 aa11.75□□□□□ -0.53
APOE-205ENST00000485628 ID1P41134 155 aa11.75□□□□□ -0.53
APOE-205ENST00000485628 PPT1P50897 306 aa11.75□□□□□ -0.53
APOE-205ENST00000485628 CMC4P56277 68 aaPredicted RBP11.75□□□□□ -0.53
APOE-205ENST00000485628 RANP62826 216 aaKnown RBP11.75□□□□□ -0.53
APOE-205ENST00000485628 CLLU1Q5K131 121 aa11.75□□□□□ -0.53
APOE-205ENST00000485628 EXOC3-AS1Q8N2X6 119 aa11.75□□□□□ -0.53
APOE-205ENST00000485628 RNF182Q8N6D2 247 aa11.75□□□□□ -0.53
APOE-205ENST00000485628 OTORQ9NRC9 128 aa11.75□□□□□ -0.53
APOE-205ENST00000485628 PRELID1Q9Y255 219 aa11.75□□□□□ -0.53
APOE-205ENST00000485628 A8MTW9 85 aa11.74□□□□□ -0.53
APOE-205ENST00000485628 TEX46H3BTG2 121 aa11.74□□□□□ -0.53
APOE-205ENST00000485628 ZNF688P0C7X2 276 aa11.74□□□□□ -0.53
APOE-205ENST00000485628 SNRPD3P62318 126 aaKnown RBP11.74□□□□□ -0.53
APOE-205ENST00000485628 PCNPQ8WW12 178 aaKnown RBP11.74□□□□□ -0.53
APOE-205ENST00000485628 NKX6-2Q9C056 277 aaPredicted RBP11.74□□□□□ -0.53
APOE-205ENST00000485628 AGRNO00468 2067 aa11.74□□□□□ -0.53
APOE-205ENST00000485628 A0A1B0GV50 99 aa11.73□□□□□ -0.53
APOE-205ENST00000485628 PGPA6NDG6 321 aa11.73□□□□□ -0.53
APOE-205ENST00000485628 M0R3E3 92 aa11.73□□□□□ -0.53
APOE-205ENST00000485628 PAGE4O60829 102 aa11.73□□□□□ -0.53
APOE-205ENST00000485628 DEFB131AP59861 70 aa11.73□□□□□ -0.53
APOE-205ENST00000485628 ICAM4Q14773 271 aa11.73□□□□□ -0.53
APOE-205ENST00000485628 CITED4Q96RK1 184 aa11.73□□□□□ -0.53
APOE-205ENST00000485628 MANBALQ9NQG1 85 aa11.73□□□□□ -0.53
APOE-205ENST00000485628 ZNF705FA8MVS1 300 aaPredicted RBP11.72□□□□□ -0.53
APOE-205ENST00000485628 NDUFS6O75380 124 aaKnown RBP11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms