RNA–Protein interactions for RNA: ENST00000484799.1

SMC4-215, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 478 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-215ENST00000484799 HSPB11Q9Y547 144 aa1.33□□□□□ -2.2
SMC4-215ENST00000484799 MYOFQ9NZM1 2061 aa1.33□□□□□ -2.2
SMC4-215ENST00000484799 RTL9Q8NET4 1388 aa1.33□□□□□ -2.2
SMC4-215ENST00000484799 ANKRD30AQ9BXX3 1397 aa1.33□□□□□ -2.2
SMC4-215ENST00000484799 TRAV27A0A087WT01 109 aa1.32□□□□□ -2.2
SMC4-215ENST00000484799 TRBV6-8A0A0A6YYG3 113 aa1.32□□□□□ -2.2
SMC4-215ENST00000484799 ODAMA1E959 279 aa1.32□□□□□ -2.2
SMC4-215ENST00000484799 PRORSD1PA6NEY8 169 aa1.32□□□□□ -2.2
SMC4-215ENST00000484799 ZNF736B4DX44 427 aaPredicted RBP1.32□□□□□ -2.2
SMC4-215ENST00000484799 M0R233 179 aa1.32□□□□□ -2.2
SMC4-215ENST00000484799 KPNA4O00629 521 aaPredicted RBP1.32□□□□□ -2.2
SMC4-215ENST00000484799 ERC2-IT1O76042 136 aa1.32□□□□□ -2.2
SMC4-215ENST00000484799 NDUFA6P56556 154 aa1.32□□□□□ -2.2
SMC4-215ENST00000484799 MSMO1Q15800 293 aa1.32□□□□□ -2.2
SMC4-215ENST00000484799 CLECL1Q8IZS7 167 aa1.32□□□□□ -2.2
SMC4-215ENST00000484799 PYDC1Q8WXC3 89 aa1.32□□□□□ -2.2
SMC4-215ENST00000484799 POP5Q969H6 163 aaKnown RBP1.32□□□□□ -2.2
SMC4-215ENST00000484799 RMND5BQ96G75 393 aaPredicted RBP1.32□□□□□ -2.2
SMC4-215ENST00000484799 HYLS1Q96M11 299 aa1.32□□□□□ -2.2
SMC4-215ENST00000484799 OTORQ9NRC9 128 aa1.32□□□□□ -2.2
SMC4-215ENST00000484799 NAT8BQ9UHF3 227 aa1.32□□□□□ -2.2
SMC4-215ENST00000484799 CHCHD2Q9Y6H1 151 aaPredicted RBP1.32□□□□□ -2.2
SMC4-215ENST00000484799 TENM1Q9UKZ4 2725 aa1.32□□□□□ -2.2
SMC4-215ENST00000484799 PRRC2BQ5JSZ5 2229 aaKnown RBP1.32□□□□□ -2.2
SMC4-215ENST00000484799 LOC110117498A0A087WWA1 95 aa1.31□□□□□ -2.2
SMC4-215ENST00000484799 TRAV10A0A0B4J240 114 aa1.31□□□□□ -2.2
SMC4-215ENST00000484799 OR2T8A6NH00 312 aa1.31□□□□□ -2.2
SMC4-215ENST00000484799 M0R2N4 97 aa1.31□□□□□ -2.2
SMC4-215ENST00000484799 PRB1P04280 392 aa1.31□□□□□ -2.2
SMC4-215ENST00000484799 NBEAP1P0C6P0 100 aa1.31□□□□□ -2.2
SMC4-215ENST00000484799 CNBPP62633 177 aaKnown RBP1.31□□□□□ -2.2
SMC4-215ENST00000484799 FAM74A1Q5RGS3 127 aa1.31□□□□□ -2.2
SMC4-215ENST00000484799 C15orf53Q8NAA6 179 aa1.31□□□□□ -2.2
SMC4-215ENST00000484799 GRPEL2Q8TAA5 225 aa1.31□□□□□ -2.2
SMC4-215ENST00000484799 CARD19Q96LW7 228 aa1.31□□□□□ -2.2
SMC4-215ENST00000484799 MRPL57Q9BQC6 102 aaKnown RBP1.31□□□□□ -2.2
SMC4-215ENST00000484799 LRTM1Q9HBL6 345 aa1.31□□□□□ -2.2
SMC4-215ENST00000484799 SPANXCQ9NY87 97 aa1.31□□□□□ -2.2
SMC4-215ENST00000484799 RNF11Q9Y3C5 154 aa1.31□□□□□ -2.2
SMC4-215ENST00000484799 KIAA1107Q9UPP5 1409 aa1.31□□□□□ -2.2
SMC4-215ENST00000484799 SCN3AQ9NY46 2000 aa1.3□□□□□ -2.2
SMC4-215ENST00000484799 N4BP2Q86UW6 1770 aaPredicted RBP1.3□□□□□ -2.2
SMC4-215ENST00000484799 IGHV1-58A0A0C4DH39 117 aa1.3□□□□□ -2.2
SMC4-215ENST00000484799 hDV103S1A0JD37 113 aa1.3□□□□□ -2.2
SMC4-215ENST00000484799 CCDC160A6NGH7 325 aa1.3□□□□□ -2.2
SMC4-215ENST00000484799 GABARAPH6UMI1 98 aa1.3□□□□□ -2.2
SMC4-215ENST00000484799 K7ERJ3 54 aa1.3□□□□□ -2.2
SMC4-215ENST00000484799 GEMIN2O14893 280 aaKnown RBP1.3□□□□□ -2.2
SMC4-215ENST00000484799 ANGP03950 147 aaKnown RBP1.3□□□□□ -2.2
SMC4-215ENST00000484799 S100A11P31949 105 aa1.3□□□□□ -2.2
SMC4-215ENST00000484799 SDC2P34741 201 aa1.3□□□□□ -2.2
SMC4-215ENST00000484799 ZNF93P35789 620 aaPredicted RBP1.3□□□□□ -2.2
SMC4-215ENST00000484799 POLR2HP52434 150 aaKnown RBP1.3□□□□□ -2.2
SMC4-215ENST00000484799 TEX261Q6UWH6 196 aa1.3□□□□□ -2.2
SMC4-215ENST00000484799 ZNF833PQ6ZTB9 187 aa1.3□□□□□ -2.2
SMC4-215ENST00000484799 ARPINQ7Z6K5 226 aa1.3□□□□□ -2.2
SMC4-215ENST00000484799 LRRC18Q8N456 261 aa1.3□□□□□ -2.2
SMC4-215ENST00000484799 FAM216BQ8N7L0 139 aa1.3□□□□□ -2.2
SMC4-215ENST00000484799 Q8N814 137 aa1.3□□□□□ -2.2
SMC4-215ENST00000484799 OR4B1Q8NGF8 309 aa1.3□□□□□ -2.2
SMC4-215ENST00000484799 C10orf105Q8TEF2 133 aa1.3□□□□□ -2.2
SMC4-215ENST00000484799 PATE1Q8WXA2 126 aa1.3□□□□□ -2.2
SMC4-215ENST00000484799 LINC00526Q96FQ7 95 aa1.3□□□□□ -2.2
SMC4-215ENST00000484799 C19orf12Q9NSK7 152 aa1.3□□□□□ -2.2
SMC4-215ENST00000484799 ORMDL1Q9P0S3 153 aa1.3□□□□□ -2.2
SMC4-215ENST00000484799 GINS2Q9Y248 185 aa1.3□□□□□ -2.2
SMC4-215ENST00000484799 MED31Q9Y3C7 131 aa1.3□□□□□ -2.2
SMC4-215ENST00000484799 ASB4Q9Y574 426 aa1.3□□□□□ -2.2
SMC4-215ENST00000484799 U3KQ87 197 aa1.3□□□□□ -2.2
SMC4-215ENST00000484799 NUP210Q8TEM1 1887 aaPredicted RBP1.3□□□□□ -2.2
SMC4-215ENST00000484799 CEP192Q8TEP8 1941 aa1.3□□□□□ -2.2
SMC4-215ENST00000484799 BCL9O00512 1426 aa1.3□□□□□ -2.2
SMC4-215ENST00000484799 ADGRB2O60241 1585 aa1.3□□□□□ -2.2
SMC4-215ENST00000484799 EXPH5Q8NEV8 1989 aa1.29□□□□□ -2.2
SMC4-215ENST00000484799 IGKV2D-26A0A0A0MRZ7 120 aa1.29□□□□□ -2.2
SMC4-215ENST00000484799 ARL5CA6NH57 179 aa1.29□□□□□ -2.2
SMC4-215ENST00000484799 H7BYZ3 331 aa1.29□□□□□ -2.2
SMC4-215ENST00000484799 INE1O15225 51 aa1.29□□□□□ -2.2
SMC4-215ENST00000484799 CCL16O15467 120 aa1.29□□□□□ -2.2
SMC4-215ENST00000484799 IGLV1-51P01701 117 aa1.29□□□□□ -2.2
SMC4-215ENST00000484799 CXCL8P10145 99 aa1.29□□□□□ -2.2
SMC4-215ENST00000484799 FABP2P12104 132 aa1.29□□□□□ -2.2
SMC4-215ENST00000484799 SRP9P49458 86 aaKnown RBP1.29□□□□□ -2.2
SMC4-215ENST00000484799 MRPS36P82909 103 aaKnown RBP1.29□□□□□ -2.2
SMC4-215ENST00000484799 MPV17LQ2QL34 196 aa1.29□□□□□ -2.2
SMC4-215ENST00000484799 C1orf134Q5TEV5 83 aa1.29□□□□□ -2.2
SMC4-215ENST00000484799 OR5AS1Q8N127 324 aa1.29□□□□□ -2.2
SMC4-215ENST00000484799 TMEM35BQ8NCS4 154 aa1.29□□□□□ -2.2
SMC4-215ENST00000484799 RAB37Q96AX2 223 aa1.29□□□□□ -2.2
SMC4-215ENST00000484799 LXNQ9BS40 222 aa1.29□□□□□ -2.2
SMC4-215ENST00000484799 FRMPD1Q5SYB0 1578 aa1.29□□□□□ -2.2
SMC4-215ENST00000484799 LAMB2P55268 1798 aa1.29□□□□□ -2.2
SMC4-215ENST00000484799 ANKRD31Q8N7Z5 1873 aa1.29□□□□□ -2.2
SMC4-215ENST00000484799 MYO5AQ9Y4I1 1855 aaKnown RBP1.29□□□□□ -2.2
SMC4-215ENST00000484799 MED13Q9UHV7 2174 aa1.28□□□□□ -2.2
SMC4-215ENST00000484799 TRBV7-6A0A0J9YX20 115 aa1.28□□□□□ -2.2
SMC4-215ENST00000484799 MT-ND6P03923 174 aa1.28□□□□□ -2.2
SMC4-215ENST00000484799 RPS28P62857 69 aaKnown RBP1.28□□□□□ -2.2
SMC4-215ENST00000484799 CIRBPQ14011 172 aaKnown RBP1.28□□□□□ -2.2
SMC4-215ENST00000484799 CCDC115Q96NT0 180 aa1.28□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms