RNA–Protein interactions for RNA: ENST00000484763.1

VCPKMT-203, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best)

Gene VCPKMT, Length 1,849 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-203ENST00000484763 ATP5G3P48201 142 aa15.52■□□□□ 0.08
VCPKMT-203ENST00000484763 HELTA6NFD8 242 aa15.52■□□□□ 0.07
VCPKMT-203ENST00000484763 ZNF785A8K8V0 405 aa15.52■□□□□ 0.07
VCPKMT-203ENST00000484763 FOLR2P14207 255 aa15.52■□□□□ 0.07
VCPKMT-203ENST00000484763 MEOX2P50222 304 aa15.52■□□□□ 0.07
VCPKMT-203ENST00000484763 TMEM158Q8WZ71 300 aa15.52■□□□□ 0.07
VCPKMT-203ENST00000484763 NKX6-2Q9C056 277 aaPredicted RBP15.52■□□□□ 0.07
VCPKMT-203ENST00000484763 OVOL1O14753 267 aa15.51■□□□□ 0.07
VCPKMT-203ENST00000484763 CD81P60033 236 aa15.51■□□□□ 0.07
VCPKMT-203ENST00000484763 RANP62826 216 aaKnown RBP15.51■□□□□ 0.07
VCPKMT-203ENST00000484763 C17orf77Q96MU5 243 aa15.51■□□□□ 0.07
VCPKMT-203ENST00000484763 GGTLC3B5MD39 225 aa15.5■□□□□ 0.07
VCPKMT-203ENST00000484763 NDUFB4O95168 129 aa15.5■□□□□ 0.07
VCPKMT-203ENST00000484763 PF4P02776 101 aa15.5■□□□□ 0.07
VCPKMT-203ENST00000484763 WNK1Q9H4A3 2382 aa15.5■□□□□ 0.07
VCPKMT-203ENST00000484763 C9JQL5 133 aa15.5■□□□□ 0.07
VCPKMT-203ENST00000484763 SLC17A3O00476 420 aa15.5■□□□□ 0.07
VCPKMT-203ENST00000484763 ZNF253O75346 499 aa15.5■□□□□ 0.07
VCPKMT-203ENST00000484763 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa15.5■□□□□ 0.07
VCPKMT-203ENST00000484763 Q9H3A6 140 aa15.5■□□□□ 0.07
VCPKMT-203ENST00000484763 PDE6DO43924 150 aa15.49■□□□□ 0.07
VCPKMT-203ENST00000484763 NDUFS6O75380 124 aaKnown RBP15.49■□□□□ 0.07
VCPKMT-203ENST00000484763 CSN3P07498 182 aa15.49■□□□□ 0.07
VCPKMT-203ENST00000484763 SUMO1P63165 101 aaKnown RBP15.49■□□□□ 0.07
VCPKMT-203ENST00000484763 ADAMTSL5Q6ZMM2 481 aa15.49■□□□□ 0.07
VCPKMT-203ENST00000484763 TCF24Q7RTU0 167 aa15.49■□□□□ 0.07
VCPKMT-203ENST00000484763 LYPD1Q8N2G4 141 aa15.49■□□□□ 0.07
VCPKMT-203ENST00000484763 FBN1P35555 2871 aaKnown RBP15.49■□□□□ 0.07
VCPKMT-203ENST00000484763 ATP6V1G1O75348 118 aa15.48■□□□□ 0.07
VCPKMT-203ENST00000484763 SRP19P09132 144 aaKnown RBP15.48■□□□□ 0.07
VCPKMT-203ENST00000484763 RPL11P62913 178 aaKnown RBP15.48■□□□□ 0.07
VCPKMT-203ENST00000484763 PSG9Q00887 426 aa15.48■□□□□ 0.07
VCPKMT-203ENST00000484763 CCDC28AQ8IWP9 274 aa15.48■□□□□ 0.07
VCPKMT-203ENST00000484763 ZNF747Q9BV97 191 aa15.48■□□□□ 0.07
VCPKMT-203ENST00000484763 SLC35B3Q9H1N7 401 aa15.48■□□□□ 0.07
VCPKMT-203ENST00000484763 OTORQ9NRC9 128 aa15.48■□□□□ 0.07
VCPKMT-203ENST00000484763 MLXQ9UH92 298 aa15.48■□□□□ 0.07
VCPKMT-203ENST00000484763 SLC50A1Q9BRV3 221 aa15.47■□□□□ 0.07
VCPKMT-203ENST00000484763 PGPA6NDG6 321 aa15.47■□□□□ 0.07
VCPKMT-203ENST00000484763 F6UZH7 168 aa15.47■□□□□ 0.07
VCPKMT-203ENST00000484763 SFTA3P0C7M3 94 aa15.47■□□□□ 0.07
VCPKMT-203ENST00000484763 TCEAL7Q9BRU2 100 aa15.47■□□□□ 0.07
VCPKMT-203ENST00000484763 AAMDCQ9H7C9 122 aa15.47■□□□□ 0.07
VCPKMT-203ENST00000484763 NRN1Q9NPD7 142 aa15.47■□□□□ 0.07
VCPKMT-203ENST00000484763 TMEM250H0YL14 139 aa15.46■□□□□ 0.07
VCPKMT-203ENST00000484763 FAM90A2PQ658T7 463 aa15.46■□□□□ 0.07
VCPKMT-203ENST00000484763 C12orf54Q6X4T0 127 aa15.46■□□□□ 0.07
VCPKMT-203ENST00000484763 EXOC3-AS1Q8N2X6 119 aa15.46■□□□□ 0.07
VCPKMT-203ENST00000484763 C3orf56Q8N813 242 aa15.46■□□□□ 0.07
VCPKMT-203ENST00000484763 CYB561D1Q8N8Q1 229 aa15.46■□□□□ 0.07
VCPKMT-203ENST00000484763 ZNF331Q9NQX6 463 aaPredicted RBP15.46■□□□□ 0.07
VCPKMT-203ENST00000484763 SELENOKQ9Y6D0 94 aa15.46■□□□□ 0.07
VCPKMT-203ENST00000484763 TMEM218A2RU14 115 aa15.45■□□□□ 0.06
VCPKMT-203ENST00000484763 DYNLRB2Q8TF09 96 aa15.45■□□□□ 0.06
VCPKMT-203ENST00000484763 SIGLEC8Q9NYZ4 499 aa15.45■□□□□ 0.06
VCPKMT-203ENST00000484763 SLC25A5P05141 298 aaKnown RBP15.45■□□□□ 0.06
VCPKMT-203ENST00000484763 CEBPGP53567 150 aa15.45■□□□□ 0.06
VCPKMT-203ENST00000484763 LINC00482Q8N8I6 264 aa15.45■□□□□ 0.06
VCPKMT-203ENST00000484763 C5orf17Q8NAS9 161 aa15.45■□□□□ 0.06
VCPKMT-203ENST00000484763 SCO2A0A1W2PP80 73 aa15.44■□□□□ 0.06
VCPKMT-203ENST00000484763 IGKV3-7A0A075B6H7 116 aa15.43■□□□□ 0.06
VCPKMT-203ENST00000484763 SAMD13Q5VXD3 122 aa15.43■□□□□ 0.06
VCPKMT-203ENST00000484763 CMTM2Q8TAZ6 248 aa15.43■□□□□ 0.06
VCPKMT-203ENST00000484763 C11orf52Q96A22 123 aa15.43■□□□□ 0.06
VCPKMT-203ENST00000484763 C16orf92Q96LL3 132 aa15.43■□□□□ 0.06
VCPKMT-203ENST00000484763 KRBOX1C9JBD0 128 aa15.42■□□□□ 0.06
VCPKMT-203ENST00000484763 SOCS3O14543 225 aa15.42■□□□□ 0.06
VCPKMT-203ENST00000484763 SHISA2Q6UWI4 295 aa15.42■□□□□ 0.06
VCPKMT-203ENST00000484763 HIST1H2BAQ96A08 127 aa15.42■□□□□ 0.06
VCPKMT-203ENST00000484763 MS4A6AQ9H2W1 248 aa15.42■□□□□ 0.06
VCPKMT-203ENST00000484763 CLEC5AQ9NY25 188 aa15.42■□□□□ 0.06
VCPKMT-203ENST00000484763 EPDR1Q9UM22 224 aa15.42■□□□□ 0.06
VCPKMT-203ENST00000484763 TRAV8-2A0A0B4J237 113 aa15.41■□□□□ 0.06
VCPKMT-203ENST00000484763 PEX7O00628 323 aa15.41■□□□□ 0.06
VCPKMT-203ENST00000484763 GNG5P63218 68 aa15.41■□□□□ 0.06
VCPKMT-203ENST00000484763 DEFB114Q30KQ6 69 aa15.41■□□□□ 0.06
VCPKMT-203ENST00000484763 SOHLH1Q5JUK2 328 aa15.41■□□□□ 0.06
VCPKMT-203ENST00000484763 IGFL4Q6B9Z1 124 aa15.41■□□□□ 0.06
VCPKMT-203ENST00000484763 DCANP1Q8TF63 244 aa15.41■□□□□ 0.06
VCPKMT-203ENST00000484763 LINC00052Q96N35 136 aa15.41■□□□□ 0.06
VCPKMT-203ENST00000484763 F8W036 122 aa15.4■□□□□ 0.06
VCPKMT-203ENST00000484763 SAP30O75446 220 aa15.4■□□□□ 0.06
VCPKMT-203ENST00000484763 ADCYAP1P18509 176 aa15.4■□□□□ 0.06
VCPKMT-203ENST00000484763 RBPMS2Q6ZRY4 209 aaKnown RBP15.4■□□□□ 0.06
VCPKMT-203ENST00000484763 GBGT1Q8N5D6 347 aa15.4■□□□□ 0.06
VCPKMT-203ENST00000484763 RPUSD4Q96CM3 377 aaKnown RBP15.4■□□□□ 0.06
VCPKMT-203ENST00000484763 ATG101Q9BSB4 218 aa15.4■□□□□ 0.06
VCPKMT-203ENST00000484763 RPH3ALQ9UNE2 315 aa15.4■□□□□ 0.06
VCPKMT-203ENST00000484763 PRELID1Q9Y255 219 aa15.4■□□□□ 0.06
VCPKMT-203ENST00000484763 M0R3E3 92 aa15.4■□□□□ 0.06
VCPKMT-203ENST00000484763 DNASE2O00115 360 aaPredicted RBP15.4■□□□□ 0.06
VCPKMT-203ENST00000484763 ISLRO14498 428 aa15.4■□□□□ 0.06
VCPKMT-203ENST00000484763 TCRAP04437 139 aa15.4■□□□□ 0.06
VCPKMT-203ENST00000484763 HLA-DMBP28068 263 aa15.4■□□□□ 0.06
VCPKMT-203ENST00000484763 CSN1S1P47710 185 aa15.4■□□□□ 0.06
VCPKMT-203ENST00000484763 PAFAH1B2P68402 229 aa15.4■□□□□ 0.06
VCPKMT-203ENST00000484763 RNF182Q8N6D2 247 aa15.4■□□□□ 0.06
VCPKMT-203ENST00000484763 SEC11CQ9BY50 192 aa15.4■□□□□ 0.06
VCPKMT-203ENST00000484763 PARLQ9H300 379 aa15.4■□□□□ 0.06
VCPKMT-203ENST00000484763 CD300EQ496F6 205 aaPredicted RBP15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms