RNA–Protein interactions for RNA: ENST00000484729.2

HLA-DQB1-208, Transcript of major histocompatibility complex, class II, DQ beta 1, human

Gene HLA-DQB1, Length 783 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HLA-DQB1-208	ENST00000484729	C2orf50	Q96LR7	162 aa		10.85	□□□□□ -0.67
HLA-DQB1-208	ENST00000484729	IGF2BP2-AS1	Q96M15	143 aa		10.85	□□□□□ -0.67
HLA-DQB1-208	ENST00000484729	C17orf77	Q96MU5	243 aa		10.85	□□□□□ -0.67
HLA-DQB1-208	ENST00000484729	GPR82	Q96P67	336 aa		10.85	□□□□□ -0.67
HLA-DQB1-208	ENST00000484729	C7orf66	A4D0T2	115 aa		10.84	□□□□□ -0.67
HLA-DQB1-208	ENST00000484729		A8MTW9	85 aa		10.84	□□□□□ -0.67
HLA-DQB1-208	ENST00000484729		M0R2Z0	102 aa		10.84	□□□□□ -0.67
HLA-DQB1-208	ENST00000484729	DUSP14	O95147	198 aa	Known RBP	10.84	□□□□□ -0.67
HLA-DQB1-208	ENST00000484729	INS	P01308	110 aa		10.84	□□□□□ -0.67
HLA-DQB1-208	ENST00000484729	S100A10	P60903	97 aa		10.84	□□□□□ -0.67
HLA-DQB1-208	ENST00000484729	POLR2G	P62487	172 aa	Known RBP eCLIP	10.84	□□□□□ -0.67
HLA-DQB1-208	ENST00000484729	OXA1L	Q15070	435 aa		10.84	□□□□□ -0.67
HLA-DQB1-208	ENST00000484729	SPINK13	Q1W4C9	94 aa		10.84	□□□□□ -0.67
HLA-DQB1-208	ENST00000484729	RNF182	Q8N6D2	247 aa		10.84	□□□□□ -0.67
HLA-DQB1-208	ENST00000484729	LSM5	Q9Y4Y9	91 aa	Known RBP	10.84	□□□□□ -0.67
HLA-DQB1-208	ENST00000484729	NACA	E9PAV3	2078 aa		10.84	□□□□□ -0.67
HLA-DQB1-208	ENST00000484729	TRAV8-2	A0A0B4J237	113 aa		10.83	□□□□□ -0.68
HLA-DQB1-208	ENST00000484729		H3BRN7	92 aa		10.83	□□□□□ -0.68
HLA-DQB1-208	ENST00000484729	SIX6	O95475	246 aa		10.83	□□□□□ -0.68
HLA-DQB1-208	ENST00000484729	RAP2B	P61225	183 aa		10.83	□□□□□ -0.68
HLA-DQB1-208	ENST00000484729	ID3	Q02535	119 aa		10.83	□□□□□ -0.68
HLA-DQB1-208	ENST00000484729	RNF212	Q495C1	297 aa		10.83	□□□□□ -0.68
HLA-DQB1-208	ENST00000484729	TMEM88	Q6PEY1	159 aa		10.83	□□□□□ -0.68
HLA-DQB1-208	ENST00000484729	CYP2G1P	Q6ZSU1	146 aa		10.83	□□□□□ -0.68
HLA-DQB1-208	ENST00000484729	TMEM144	Q7Z5S9	345 aa		10.83	□□□□□ -0.68
HLA-DQB1-208	ENST00000484729	ZNF738	Q8NE65	137 aa		10.83	□□□□□ -0.68
HLA-DQB1-208	ENST00000484729	OR11H7	Q8NGC8	314 aa		10.83	□□□□□ -0.68
HLA-DQB1-208	ENST00000484729	SLC25A39	Q9BZJ4	359 aa	Predicted RBP	10.83	□□□□□ -0.68
HLA-DQB1-208	ENST00000484729	MGAT4C	Q9UBM8	478 aa		10.83	□□□□□ -0.68
HLA-DQB1-208	ENST00000484729	HIGD1A	Q9Y241	93 aa		10.83	□□□□□ -0.68
HLA-DQB1-208	ENST00000484729	LRP1B	Q9NZR2	4599 aa		10.83	□□□□□ -0.68
HLA-DQB1-208	ENST00000484729	APOB	P04114	4563 aa	Known RBP	10.82	□□□□□ -0.68
HLA-DQB1-208	ENST00000484729	ZNF705G	A8MUZ8	300 aa	Predicted RBP	10.82	□□□□□ -0.68
HLA-DQB1-208	ENST00000484729		L7N2F9	121 aa		10.82	□□□□□ -0.68
HLA-DQB1-208	ENST00000484729	MBP	P02686	304 aa	Predicted RBP	10.82	□□□□□ -0.68
HLA-DQB1-208	ENST00000484729	VAMP2	P63027	116 aa		10.82	□□□□□ -0.68
HLA-DQB1-208	ENST00000484729	BAP18	Q8IXM2	172 aa		10.82	□□□□□ -0.68
HLA-DQB1-208	ENST00000484729	SHANK2-AS3	Q9BTD1	123 aa		10.82	□□□□□ -0.68
HLA-DQB1-208	ENST00000484729	PSENEN	Q9NZ42	101 aa		10.82	□□□□□ -0.68
HLA-DQB1-208	ENST00000484729	RCL1	Q9Y2P8	373 aa	Known RBP	10.82	□□□□□ -0.68
HLA-DQB1-208	ENST00000484729	DMBT1	Q9UGM3	2413 aa	Predicted RBP	10.82	□□□□□ -0.68
HLA-DQB1-208	ENST00000484729	HYPM	O75409	117 aa		10.81	□□□□□ -0.68
HLA-DQB1-208	ENST00000484729	PRM2	P04554	102 aa		10.81	□□□□□ -0.68
HLA-DQB1-208	ENST00000484729	OR5G3	P0C626	314 aa		10.81	□□□□□ -0.68
HLA-DQB1-208	ENST00000484729	LINC00869	P0C866	280 aa		10.81	□□□□□ -0.68
HLA-DQB1-208	ENST00000484729	RPL7	P18124	248 aa	Known RBP	10.81	□□□□□ -0.68
HLA-DQB1-208	ENST00000484729	RRAS2	P62070	204 aa	Predicted RBP	10.81	□□□□□ -0.68
HLA-DQB1-208	ENST00000484729	UHRF2	Q96PU4	802 aa		10.81	□□□□□ -0.68
HLA-DQB1-208	ENST00000484729	MED28	Q9H204	178 aa		10.81	□□□□□ -0.68
HLA-DQB1-208	ENST00000484729	TRAV12-2	A0A075B6T6	113 aa		10.8	□□□□□ -0.68
HLA-DQB1-208	ENST00000484729	BOLA2-SMG1P6	H3BVE0	249 aa		10.8	□□□□□ -0.68
HLA-DQB1-208	ENST00000484729		K7EPK0	472 aa		10.8	□□□□□ -0.68
HLA-DQB1-208	ENST00000484729	CRX	O43186	299 aa	Predicted RBP	10.8	□□□□□ -0.68
HLA-DQB1-208	ENST00000484729	PVALB	P20472	110 aa	Predicted RBP	10.8	□□□□□ -0.68
HLA-DQB1-208	ENST00000484729	CYCS	P99999	105 aa	Known RBP	10.8	□□□□□ -0.68
HLA-DQB1-208	ENST00000484729	HIST1H1A	Q02539	215 aa	Predicted RBP	10.8	□□□□□ -0.68
HLA-DQB1-208	ENST00000484729	PPP1R14D	Q9NXH3	145 aa		10.8	□□□□□ -0.68
HLA-DQB1-208	ENST00000484729	CCNK	O75909	580 aa		10.79	□□□□□ -0.68
HLA-DQB1-208	ENST00000484729	DEFB130B	P0DP73	79 aa		10.79	□□□□□ -0.68
HLA-DQB1-208	ENST00000484729	DEFB130A	P0DP74	79 aa		10.79	□□□□□ -0.68
HLA-DQB1-208	ENST00000484729	B2M	P61769	119 aa		10.79	□□□□□ -0.68
HLA-DQB1-208	ENST00000484729	RHOB	P62745	196 aa		10.79	□□□□□ -0.68
HLA-DQB1-208	ENST00000484729	RAB32	Q13637	225 aa		10.79	□□□□□ -0.68
HLA-DQB1-208	ENST00000484729	LRRC37A5P	Q49AS3	106 aa		10.79	□□□□□ -0.68
HLA-DQB1-208	ENST00000484729	C15orf53	Q8NAA6	179 aa		10.79	□□□□□ -0.68
HLA-DQB1-208	ENST00000484729	LRRC20	Q8TCA0	184 aa		10.79	□□□□□ -0.68
HLA-DQB1-208	ENST00000484729	SMIM8	Q96KF7	97 aa		10.79	□□□□□ -0.68
HLA-DQB1-208	ENST00000484729	NMES1	Q9C002	83 aa		10.79	□□□□□ -0.68
HLA-DQB1-208	ENST00000484729	PMS2P5	A8MQ11	134 aa		10.78	□□□□□ -0.68
HLA-DQB1-208	ENST00000484729	LYRM9	A8MSI8	78 aa		10.78	□□□□□ -0.68
HLA-DQB1-208	ENST00000484729	METTL15P1	P0C7V9	234 aa		10.78	□□□□□ -0.68
HLA-DQB1-208	ENST00000484729	PRB4	P10163	310 aa	Predicted RBP	10.78	□□□□□ -0.68
HLA-DQB1-208	ENST00000484729	CXCL3	P19876	107 aa		10.78	□□□□□ -0.68
HLA-DQB1-208	ENST00000484729	BCAP31	P51572	246 aa		10.78	□□□□□ -0.68
HLA-DQB1-208	ENST00000484729	H2BFS	P57053	126 aa		10.78	□□□□□ -0.68
HLA-DQB1-208	ENST00000484729	TAS2R30	P59541	319 aa		10.78	□□□□□ -0.68
HLA-DQB1-208	ENST00000484729	PLP1	P60201	277 aa		10.78	□□□□□ -0.68
HLA-DQB1-208	ENST00000484729	SELENOT	P62341	195 aa		10.78	□□□□□ -0.68
HLA-DQB1-208	ENST00000484729	DLK1	P80370	383 aa		10.78	□□□□□ -0.68
HLA-DQB1-208	ENST00000484729	S100A7A	Q86SG5	101 aa		10.78	□□□□□ -0.68
HLA-DQB1-208	ENST00000484729	OR8A1	Q8NGG7	326 aa		10.78	□□□□□ -0.68
HLA-DQB1-208	ENST00000484729	ATG101	Q9BSB4	218 aa		10.78	□□□□□ -0.68
HLA-DQB1-208	ENST00000484729		A0A087X0K7	114 aa		10.77	□□□□□ -0.69
HLA-DQB1-208	ENST00000484729	TSC22D2	O75157	780 aa		10.77	□□□□□ -0.69
HLA-DQB1-208	ENST00000484729	RLN2	P04090	185 aa		10.77	□□□□□ -0.69
HLA-DQB1-208	ENST00000484729	TSPO	P30536	169 aa		10.77	□□□□□ -0.69
HLA-DQB1-208	ENST00000484729	CAV2	P51636	162 aa		10.77	□□□□□ -0.69
HLA-DQB1-208	ENST00000484729	SLC38A11	Q08AI6	406 aa		10.77	□□□□□ -0.69
HLA-DQB1-208	ENST00000484729	FCN2	Q15485	313 aa		10.77	□□□□□ -0.69
HLA-DQB1-208	ENST00000484729	C6orf223	Q8N319	242 aa		10.77	□□□□□ -0.69
HLA-DQB1-208	ENST00000484729	OR10P1	Q8NGE3	313 aa		10.77	□□□□□ -0.69
HLA-DQB1-208	ENST00000484729	LINC01587	Q99440	93 aa		10.77	□□□□□ -0.69
HLA-DQB1-208	ENST00000484729	ARL6	Q9H0F7	186 aa		10.77	□□□□□ -0.69
HLA-DQB1-208	ENST00000484729	PET100	P0DJ07	73 aa		10.76	□□□□□ -0.69
HLA-DQB1-208	ENST00000484729	HTN1	P15515	57 aa		10.76	□□□□□ -0.69
HLA-DQB1-208	ENST00000484729	AZU1	P20160	251 aa		10.76	□□□□□ -0.69
HLA-DQB1-208	ENST00000484729	PSG3	Q16557	428 aa		10.76	□□□□□ -0.69
HLA-DQB1-208	ENST00000484729	TEPP	Q6URK8	271 aa		10.76	□□□□□ -0.69
HLA-DQB1-208	ENST00000484729	TMEM14EP	Q6UXP3	125 aa		10.76	□□□□□ -0.69
HLA-DQB1-208	ENST00000484729	SPATA12	Q7Z6I5	190 aa		10.76	□□□□□ -0.69

Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms