RNA–Protein interactions for RNA: ENST00000483922.1

UBR4-213, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 543 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-213ENST00000483922 GFI1BQ5VTD9 330 aa8.77□□□□□ -1.01
UBR4-213ENST00000483922 Q6ZTI0 123 aa8.77□□□□□ -1.01
UBR4-213ENST00000483922 CLVS1Q8IUQ0 354 aaPredicted RBP8.77□□□□□ -1.01
UBR4-213ENST00000483922 BPIFCQ8NFQ6 507 aa8.77□□□□□ -1.01
UBR4-213ENST00000483922 OR10J6PQ8NGY7 276 aa8.77□□□□□ -1.01
UBR4-213ENST00000483922 FRZBQ92765 325 aa8.77□□□□□ -1.01
UBR4-213ENST00000483922 TMEM147Q9BVK8 224 aa8.77□□□□□ -1.01
UBR4-213ENST00000483922 PAIP2BQ9ULR5 123 aaKnown RBP8.77□□□□□ -1.01
UBR4-213ENST00000483922 PMS2P5A8MQ11 134 aa8.76□□□□□ -1.01
UBR4-213ENST00000483922 H7BYZ3 331 aa8.76□□□□□ -1.01
UBR4-213ENST00000483922 WRBO00258 174 aa8.76□□□□□ -1.01
UBR4-213ENST00000483922 SIVA1O15304 175 aa8.76□□□□□ -1.01
UBR4-213ENST00000483922 C15orf40Q8WUR7 153 aa8.76□□□□□ -1.01
UBR4-213ENST00000483922 RPUSD4Q96CM3 377 aaKnown RBP8.76□□□□□ -1.01
UBR4-213ENST00000483922 PRRT1Q99946 306 aa8.76□□□□□ -1.01
UBR4-213ENST00000483922 LINC00854A0A1B0GVQ3 168 aa8.75□□□□□ -1.01
UBR4-213ENST00000483922 H3BP45 60 aa8.75□□□□□ -1.01
UBR4-213ENST00000483922 CTDSPLO15194 276 aa8.75□□□□□ -1.01
UBR4-213ENST00000483922 PLP1P60201 277 aa8.75□□□□□ -1.01
UBR4-213ENST00000483922 CDPF1Q6NVV7 123 aa8.75□□□□□ -1.01
UBR4-213ENST00000483922 CYP2G1PQ6ZSU1 146 aa8.75□□□□□ -1.01
UBR4-213ENST00000483922 ACOT7LQ6ZUV0 252 aa8.75□□□□□ -1.01
UBR4-213ENST00000483922 AP3S1Q92572 193 aa8.75□□□□□ -1.01
UBR4-213ENST00000483922 C18orf15Q96N68 181 aa8.75□□□□□ -1.01
UBR4-213ENST00000483922 PPP1R14DQ9NXH3 145 aa8.75□□□□□ -1.01
UBR4-213ENST00000483922 FAT3Q8TDW7 4589 aa8.74□□□□□ -1.01
UBR4-213ENST00000483922 SYNGR2O43760 224 aa8.74□□□□□ -1.01
UBR4-213ENST00000483922 CCNKO75909 580 aa8.74□□□□□ -1.01
UBR4-213ENST00000483922 RLN2P04090 185 aa8.74□□□□□ -1.01
UBR4-213ENST00000483922 CT45A10P0DMU9 189 aa8.74□□□□□ -1.01
UBR4-213ENST00000483922 RPL7P18124 248 aaKnown RBP8.74□□□□□ -1.01
UBR4-213ENST00000483922 MRPS10P82664 201 aaKnown RBP8.74□□□□□ -1.01
UBR4-213ENST00000483922 ICAM4Q14773 271 aa8.74□□□□□ -1.01
UBR4-213ENST00000483922 SPANXN5Q5MJ07 72 aa8.74□□□□□ -1.01
UBR4-213ENST00000483922 TMED4Q7Z7H5 227 aa8.74□□□□□ -1.01
UBR4-213ENST00000483922 C20orf144Q9BQM9 153 aa8.74□□□□□ -1.01
UBR4-213ENST00000483922 ZNF331Q9NQX6 463 aaPredicted RBP8.74□□□□□ -1.01
UBR4-213ENST00000483922 HIGD1AQ9Y241 93 aa8.74□□□□□ -1.01
UBR4-213ENST00000483922 H3BTX0 84 aa8.73□□□□□ -1.01
UBR4-213ENST00000483922 SLC17A3O00476 420 aa8.73□□□□□ -1.01
UBR4-213ENST00000483922 HYPMO75409 117 aa8.73□□□□□ -1.01
UBR4-213ENST00000483922 NXPH4O95158 308 aa8.73□□□□□ -1.01
UBR4-213ENST00000483922 IL5P05113 134 aa8.73□□□□□ -1.01
UBR4-213ENST00000483922 DAZ2Q13117 558 aaKnown RBP8.73□□□□□ -1.01
UBR4-213ENST00000483922 MORN5Q5VZ52 161 aa8.73□□□□□ -1.01
UBR4-213ENST00000483922 LRTM2Q8N967 370 aa8.73□□□□□ -1.01
UBR4-213ENST00000483922 C11orf72Q8NBR9 251 aa8.73□□□□□ -1.01
UBR4-213ENST00000483922 ZNF431Q8TF32 576 aaPredicted RBP8.73□□□□□ -1.01
UBR4-213ENST00000483922 VCX3AQ9NNX9 186 aa8.73□□□□□ -1.01
UBR4-213ENST00000483922 TRAV12-3A0A0B4J271 114 aa8.72□□□□□ -1.01
UBR4-213ENST00000483922 J3KRW8 73 aa8.72□□□□□ -1.01
UBR4-213ENST00000483922 OR5G3P0C626 314 aa8.72□□□□□ -1.01
UBR4-213ENST00000483922 LINC00869P0C866 280 aa8.72□□□□□ -1.01
UBR4-213ENST00000483922 SLC25A6P12236 298 aa8.72□□□□□ -1.01
UBR4-213ENST00000483922 ERVFC1-1P60608 527 aa8.72□□□□□ -1.01
UBR4-213ENST00000483922 AKR1C1Q04828 323 aa8.72□□□□□ -1.01
UBR4-213ENST00000483922 SPCS2Q15005 226 aa8.72□□□□□ -1.01
UBR4-213ENST00000483922 LYPD5Q6UWN5 251 aa8.72□□□□□ -1.01
UBR4-213ENST00000483922 CCDC28AQ8IWP9 274 aa8.72□□□□□ -1.01
UBR4-213ENST00000483922 SOSTQ9BQB4 213 aa8.72□□□□□ -1.01
UBR4-213ENST00000483922 GSN-AS1Q9NRJ2 163 aa8.72□□□□□ -1.01
UBR4-213ENST00000483922 DUXBA0A1W2PPF3 345 aa8.71□□□□□ -1.02
UBR4-213ENST00000483922 SNURFLB1AK76 121 aa8.71□□□□□ -1.02
UBR4-213ENST00000483922 RGS5O15539 181 aa8.71□□□□□ -1.02
UBR4-213ENST00000483922 ADAP1O75689 374 aa8.71□□□□□ -1.02
UBR4-213ENST00000483922 GCSHP23434 173 aa8.71□□□□□ -1.02
UBR4-213ENST00000483922 RAP2BP61225 183 aa8.71□□□□□ -1.02
UBR4-213ENST00000483922 SRPXP78539 464 aa8.71□□□□□ -1.02
UBR4-213ENST00000483922 IL18Q14116 193 aa8.71□□□□□ -1.02
UBR4-213ENST00000483922 TEPPQ6URK8 271 aa8.71□□□□□ -1.02
UBR4-213ENST00000483922 SAT2Q96F10 170 aaPredicted RBP8.71□□□□□ -1.02
UBR4-213ENST00000483922 ARL6Q9H0F7 186 aa8.71□□□□□ -1.02
UBR4-213ENST00000483922 FAM30AQ9NZY2 134 aa8.71□□□□□ -1.02
UBR4-213ENST00000483922 SCP2D1Q9UJQ7 156 aa8.71□□□□□ -1.02
UBR4-213ENST00000483922 KLF12Q9Y4X4 402 aa8.71□□□□□ -1.02
UBR4-213ENST00000483922 H3BQ15 152 aa8.7□□□□□ -1.02
UBR4-213ENST00000483922 HOXB5P09067 269 aa8.7□□□□□ -1.02
UBR4-213ENST00000483922 SMIM18P0DKX4 95 aa8.7□□□□□ -1.02
UBR4-213ENST00000483922 ANXA3P12429 323 aa8.7□□□□□ -1.02
UBR4-213ENST00000483922 ID3Q02535 119 aa8.7□□□□□ -1.02
UBR4-213ENST00000483922 Q6ZQT7 251 aa8.7□□□□□ -1.02
UBR4-213ENST00000483922 LRRC20Q8TCA0 184 aa8.7□□□□□ -1.02
UBR4-213ENST00000483922 TMEM37Q8WXS4 190 aa8.7□□□□□ -1.02
UBR4-213ENST00000483922 SCGB3A2Q96PL1 93 aa8.7□□□□□ -1.02
UBR4-213ENST00000483922 CIB3Q96Q77 187 aaPredicted RBP8.7□□□□□ -1.02
UBR4-213ENST00000483922 ARV1Q9H2C2 271 aa8.7□□□□□ -1.02
UBR4-213ENST00000483922 MCUBQ9NWR8 336 aa8.7□□□□□ -1.02
UBR4-213ENST00000483922 PTTG2Q9NZH5 202 aa8.7□□□□□ -1.02
UBR4-213ENST00000483922 RABL2BQ9UNT1 228 aa8.7□□□□□ -1.02
UBR4-213ENST00000483922 FAM229AH3BQW9 127 aa8.69□□□□□ -1.02
UBR4-213ENST00000483922 EREGO14944 169 aa8.69□□□□□ -1.02
UBR4-213ENST00000483922 ZNF324O75467 553 aaPredicted RBP8.69□□□□□ -1.02
UBR4-213ENST00000483922 MED6O75586 246 aa8.69□□□□□ -1.02
UBR4-213ENST00000483922 IFNA5P01569 189 aa8.69□□□□□ -1.02
UBR4-213ENST00000483922 ANXA7P20073 488 aaKnown RBP8.69□□□□□ -1.02
UBR4-213ENST00000483922 RRAS2P62070 204 aaPredicted RBP8.69□□□□□ -1.02
UBR4-213ENST00000483922 POLR2GP62487 172 aaKnown RBP eCLIP8.69□□□□□ -1.02
UBR4-213ENST00000483922 RPP30P78346 268 aaKnown RBP8.69□□□□□ -1.02
UBR4-213ENST00000483922 TMEM128Q5BJH2 165 aa8.69□□□□□ -1.02
UBR4-213ENST00000483922 CCDC190Q86UF4 302 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 145.1 ms